RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 KLLNB2CW77 178 aa11.48□□□□□ -0.57
C9orf3-204ENST00000424143 SCGB2A2Q13296 93 aa11.48□□□□□ -0.57
C9orf3-204ENST00000424143 Q6ZQT7 251 aa11.48□□□□□ -0.57
C9orf3-204ENST00000424143 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
C9orf3-204ENST00000424143 PGPEP1Q9NXJ5 209 aa11.48□□□□□ -0.57
C9orf3-204ENST00000424143 IGHV3-49A0A0A0MS15 119 aa11.47□□□□□ -0.57
C9orf3-204ENST00000424143 A0A1B0GV72 72 aa11.47□□□□□ -0.57
C9orf3-204ENST00000424143 FOXI1Q12951 378 aa11.47□□□□□ -0.57
C9orf3-204ENST00000424143 CDSNQ15517 529 aa11.47□□□□□ -0.57
C9orf3-204ENST00000424143 GTSF1LQ9H1H1 148 aa11.47□□□□□ -0.57
C9orf3-204ENST00000424143 ZNF580Q9UK33 172 aa11.47□□□□□ -0.57
C9orf3-204ENST00000424143 IGLV4-69A0A075B6H9 119 aa11.46□□□□□ -0.57
C9orf3-204ENST00000424143 A0A0J9YY99 117 aa11.46□□□□□ -0.57
C9orf3-204ENST00000424143 K7EMT4 169 aa11.46□□□□□ -0.57
C9orf3-204ENST00000424143 SH2D6Q7Z4S9 175 aa11.46□□□□□ -0.57
C9orf3-204ENST00000424143 MRPL16Q9NX20 251 aaKnown RBP11.46□□□□□ -0.57
C9orf3-204ENST00000424143 ZNF292O60281 2723 aa11.46□□□□□ -0.57
C9orf3-204ENST00000424143 ABCA4P78363 2273 aa11.46□□□□□ -0.57
C9orf3-204ENST00000424143 MTURNQ8N3F0 131 aa11.46□□□□□ -0.58
C9orf3-204ENST00000424143 SLC25A29Q8N8R3 303 aa11.46□□□□□ -0.58
C9orf3-204ENST00000424143 TRBV27A0A0K0K1C4 114 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 LGALS9O00182 355 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 APOMO95445 188 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 TSHBP01222 138 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 IGHG2P01859 326 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 SRSF9Q13242 221 aaKnown RBP eCLIP11.45□□□□□ -0.58
C9orf3-204ENST00000424143 AMTNQ6UX39 209 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 SCGB1D4Q6XE38 83 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 ZFP2Q6ZN57 461 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 NFE4Q86UQ8 179 aa11.45□□□□□ -0.58
C9orf3-204ENST00000424143 PIEZO2Q9H5I5 2752 aa11.44□□□□□ -0.58
C9orf3-204ENST00000424143 TSPAN13O95857 204 aa11.44□□□□□ -0.58
C9orf3-204ENST00000424143 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
C9orf3-204ENST00000424143 MGPP08493 103 aa11.44□□□□□ -0.58
C9orf3-204ENST00000424143 RNASE4P34096 147 aaKnown RBP11.44□□□□□ -0.58
C9orf3-204ENST00000424143 RHOHQ15669 191 aa11.44□□□□□ -0.58
C9orf3-204ENST00000424143 ZNF876PQ49A33 203 aa11.44□□□□□ -0.58
C9orf3-204ENST00000424143 NDUFA11Q86Y39 141 aa11.44□□□□□ -0.58
C9orf3-204ENST00000424143 KLK15Q9H2R5 256 aa11.44□□□□□ -0.58
C9orf3-204ENST00000424143 DUSP14O95147 198 aaKnown RBP11.43□□□□□ -0.58
C9orf3-204ENST00000424143 SMCPP49901 116 aaPredicted RBP11.43□□□□□ -0.58
C9orf3-204ENST00000424143 SMAGPQ0VAQ4 97 aa11.43□□□□□ -0.58
C9orf3-204ENST00000424143 UNQ9165/PRO28630Q6UXU0 137 aa11.43□□□□□ -0.58
C9orf3-204ENST00000424143 LINC01600Q96MT4 127 aa11.43□□□□□ -0.58
C9orf3-204ENST00000424143 KIR2DL4Q99706 377 aa11.43□□□□□ -0.58
C9orf3-204ENST00000424143 TTC28Q96AY4 2481 aa11.43□□□□□ -0.58
C9orf3-204ENST00000424143 GNRH2O43555 120 aa11.42□□□□□ -0.58
C9orf3-204ENST00000424143 ID1P41134 155 aa11.42□□□□□ -0.58
C9orf3-204ENST00000424143 PPDPFLQ8WWR9 84 aa11.42□□□□□ -0.58
C9orf3-204ENST00000424143 PLEKHB2Q96CS7 222 aa11.42□□□□□ -0.58
C9orf3-204ENST00000424143 IGHV3-30P01768 117 aa11.42□□□□□ -0.58
C9orf3-204ENST00000424143 IGHV3-30-5P0DP03 117 aa11.42□□□□□ -0.58
C9orf3-204ENST00000424143 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
C9orf3-204ENST00000424143 MGAQ8IWI9 3026 aa11.41□□□□□ -0.58
C9orf3-204ENST00000424143 A0A0J9YX75 114 aa11.41□□□□□ -0.58
C9orf3-204ENST00000424143 A0A1W2PPR1 153 aa11.41□□□□□ -0.58
C9orf3-204ENST00000424143 NSUN5P1Q3KNT7 163 aa11.41□□□□□ -0.58
C9orf3-204ENST00000424143 TEN1Q86WV5 123 aa11.41□□□□□ -0.58
C9orf3-204ENST00000424143 C10orf126Q8N4M7 172 aa11.41□□□□□ -0.58
C9orf3-204ENST00000424143 RNF152Q8N8N0 203 aa11.41□□□□□ -0.58
C9orf3-204ENST00000424143 AMELXQ99217 191 aa11.41□□□□□ -0.58
C9orf3-204ENST00000424143 FOXC1Q12948 553 aa11.4□□□□□ -0.58
C9orf3-204ENST00000424143 SUMO4Q6EEV6 95 aa11.4□□□□□ -0.58
C9orf3-204ENST00000424143 FAM159AQ6UWV7 190 aa11.4□□□□□ -0.58
C9orf3-204ENST00000424143 C9orf85Q96MD7 179 aa11.4□□□□□ -0.58
C9orf3-204ENST00000424143 A6NDX4 124 aa11.39□□□□□ -0.59
C9orf3-204ENST00000424143 IGLV1-40P01703 118 aa11.39□□□□□ -0.59
C9orf3-204ENST00000424143 RHPN1-AS1Q9BWJ2 59 aa11.39□□□□□ -0.59
C9orf3-204ENST00000424143 BPESC1Q9GZL8 116 aa11.39□□□□□ -0.59
C9orf3-204ENST00000424143 CDIP1Q9H305 208 aa11.39□□□□□ -0.59
C9orf3-204ENST00000424143 DAZ1Q9NQZ3 744 aaKnown RBP11.39□□□□□ -0.59
C9orf3-204ENST00000424143 BSNQ9UPA5 3926 aa11.39□□□□□ -0.59
C9orf3-204ENST00000424143 AKAP13Q12802 2813 aa11.39□□□□□ -0.59
C9orf3-204ENST00000424143 LEPROTO15243 131 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 EDA2RQ9HAV5 297 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 SDHAF1A6NFY7 115 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 TRBV12-3P01733 135 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 CFC1BP0CG36 223 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 CFC1P0CG37 223 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 PSMB2P49721 201 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 CRYBA4P53673 196 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 PRO1854Q9UHT4 67 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 BOD1L1Q8NFC6 3051 aa11.38□□□□□ -0.59
C9orf3-204ENST00000424143 MUC4Q99102 2169 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 CFAP47Q6ZTR5 3102 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 SMG1Q96Q15 3661 aaKnown RBP11.37□□□□□ -0.59
C9orf3-204ENST00000424143 A0A0B4J2C4 111 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 J3QQQ9 107 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 P0DMU3 169 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 FAM231AP0DMU4 169 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 FAM231CP0DMU5 169 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 INSL3P51460 131 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 TMEM219Q86XT9 240 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 KLHL30-AS1Q8NEE0 82 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-204ENST00000424143 MDFICQ9P1T7 246 aa11.37□□□□□ -0.59
C9orf3-204ENST00000424143 ZNF256Q9Y2P7 627 aaPredicted RBP11.37□□□□□ -0.59
C9orf3-204ENST00000424143 PTPRQQ9UMZ3 2332 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms