RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 C14orf178Q8N769 122 aaPredicted RBP12.63□□□□□ -0.39
SEMA4F-204ENST00000420077 MUC4Q99102 2169 aa12.63□□□□□ -0.39
SEMA4F-204ENST00000420077 ABCA12Q86UK0 2595 aa12.62□□□□□ -0.39
SEMA4F-204ENST00000420077 IGKV2D-26A0A0A0MRZ7 120 aa12.62□□□□□ -0.39
SEMA4F-204ENST00000420077 C7orf71A4D174 169 aa12.62□□□□□ -0.39
SEMA4F-204ENST00000420077 GNRH2O43555 120 aa12.62□□□□□ -0.39
SEMA4F-204ENST00000420077 ID1P41134 155 aa12.62□□□□□ -0.39
SEMA4F-204ENST00000420077 SUMO2P61956 95 aaKnown RBP12.62□□□□□ -0.39
SEMA4F-204ENST00000420077 OR4C5Q8NGB2 326 aa12.62□□□□□ -0.39
SEMA4F-204ENST00000420077 C20orf78Q9BR46 151 aa12.62□□□□□ -0.39
SEMA4F-204ENST00000420077 ANKRD17O75179 2603 aaKnown RBP12.61□□□□□ -0.39
SEMA4F-204ENST00000420077 NXPH4O95158 308 aa12.61□□□□□ -0.39
SEMA4F-204ENST00000420077 C10orf99Q6UWK7 81 aa12.61□□□□□ -0.39
SEMA4F-204ENST00000420077 MAPK1IP1LQ8NDC0 245 aa12.61□□□□□ -0.39
SEMA4F-204ENST00000420077 AP1S3Q96PC3 154 aa12.61□□□□□ -0.39
SEMA4F-204ENST00000420077 TMEM89A2RUT3 159 aa12.6□□□□□ -0.39
SEMA4F-204ENST00000420077 RPL39LQ96EH5 51 aaKnown RBP12.6□□□□□ -0.39
SEMA4F-204ENST00000420077 MRPL35Q9NZE8 188 aaKnown RBP12.6□□□□□ -0.39
SEMA4F-204ENST00000420077 A6NDN8 102 aa12.6□□□□□ -0.39
SEMA4F-204ENST00000420077 J3QLI3 93 aa12.6□□□□□ -0.39
SEMA4F-204ENST00000420077 ORMDL2Q53FV1 153 aa12.6□□□□□ -0.39
SEMA4F-204ENST00000420077 ZC2HC1BQ5TFG8 222 aa12.6□□□□□ -0.39
SEMA4F-204ENST00000420077 DOPEY2Q9Y3R5 2298 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 A0A087WX48 190 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 TRAV8-6A0A0B4J262 113 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 RNF223E7ERA6 249 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 K7EMI3 77 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 MGPP08493 103 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 AMMECR1LQ6DCA0 310 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 ZNF469Q96JG9 3925 aaPredicted RBP12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 PLA2G2AP14555 144 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 GTSCR1Q86UQ5 136 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 TMEM160Q9NX00 188 aa12.59□□□□□ -0.39
SEMA4F-204ENST00000420077 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.58□□□□□ -0.4
SEMA4F-204ENST00000420077 HLA-DRB4P13762 266 aa12.58□□□□□ -0.4
SEMA4F-204ENST00000420077 TOMM6Q96B49 74 aa12.58□□□□□ -0.4
SEMA4F-204ENST00000420077 HIGD1BQ9P298 99 aa12.58□□□□□ -0.4
SEMA4F-204ENST00000420077 HLA-DRB4X5D2U9 266 aa12.58□□□□□ -0.4
SEMA4F-204ENST00000420077 PTPN13Q12923 2485 aa12.58□□□□□ -0.4
SEMA4F-204ENST00000420077 H3BRM9 83 aa12.57□□□□□ -0.4
SEMA4F-204ENST00000420077 K7EP13 123 aa12.57□□□□□ -0.4
SEMA4F-204ENST00000420077 TRAV12-1A0A0B4J245 112 aa12.57□□□□□ -0.4
SEMA4F-204ENST00000420077 TGFAP01135 160 aa12.57□□□□□ -0.4
SEMA4F-204ENST00000420077 FAM159AQ6UWV7 190 aa12.57□□□□□ -0.4
SEMA4F-204ENST00000420077 TTTY13Q9BZ97 58 aa12.57□□□□□ -0.4
SEMA4F-204ENST00000420077 PPP1R17O96001 155 aa12.56□□□□□ -0.4
SEMA4F-204ENST00000420077 PLNP26678 52 aa12.56□□□□□ -0.4
SEMA4F-204ENST00000420077 KIF25-AS1Q9Y6Z4 181 aa12.56□□□□□ -0.4
SEMA4F-204ENST00000420077 APCP25054 2843 aa12.56□□□□□ -0.4
SEMA4F-204ENST00000420077 ODF3Q96PU9 254 aa12.56□□□□□ -0.4
SEMA4F-204ENST00000420077 ZANQ9Y493 2812 aa12.55□□□□□ -0.4
SEMA4F-204ENST00000420077 ZNF688P0C7X2 276 aa12.55□□□□□ -0.4
SEMA4F-204ENST00000420077 LINC00315P59091 139 aa12.55□□□□□ -0.4
SEMA4F-204ENST00000420077 SCGB3A1Q96QR1 104 aa12.55□□□□□ -0.4
SEMA4F-204ENST00000420077 VPREB3Q9UKI3 123 aa12.55□□□□□ -0.4
SEMA4F-204ENST00000420077 CR1P17927 2039 aa12.55□□□□□ -0.4
SEMA4F-204ENST00000420077 C9orf118A6NHY6 69 aa12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 F8VRH5 84 aa12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 J3QKU1 62 aa12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 WFDC12Q8WWY7 111 aa12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 HELZ2Q9BYK8 2649 aaKnown RBP12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 TRBV25-1A0A075B6N4 114 aa12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 TRAV12-3A0A0B4J271 114 aa12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 H7C1H1 209 aa12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 RNASE8Q8TDE3 154 aaKnown RBP12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 CHAC1Q9BUX1 264 aa12.54□□□□□ -0.4
SEMA4F-204ENST00000420077 FSHBP01225 129 aa12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 SNRPD3P62318 126 aaKnown RBP12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 IGHV4OR15-8A0A075B7B6 117 aa12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 A0A087WW49 117 aa12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 A0A0J9YX75 114 aa12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 K7EQG2 157 aa12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 CD7P09564 240 aa12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 C2orf66Q6UXQ4 117 aa12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 NEXN-AS1Q8NBZ9 246 aa12.53□□□□□ -0.4
SEMA4F-204ENST00000420077 CSTL1Q9H114 145 aa12.52□□□□□ -0.4
SEMA4F-204ENST00000420077 LGALS9O00182 355 aa12.52□□□□□ -0.41
SEMA4F-204ENST00000420077 ELANEP08246 267 aa12.52□□□□□ -0.41
SEMA4F-204ENST00000420077 SYNJ2BPP57105 145 aa12.52□□□□□ -0.41
SEMA4F-204ENST00000420077 RPL32P62910 135 aaKnown RBP12.52□□□□□ -0.41
SEMA4F-204ENST00000420077 Q6YL49 198 aa12.52□□□□□ -0.41
SEMA4F-204ENST00000420077 JMJD8Q96S16 334 aa12.52□□□□□ -0.41
SEMA4F-204ENST00000420077 ZNF702PQ9H963 129 aa12.52□□□□□ -0.41
SEMA4F-204ENST00000420077 CHTOPQ9Y3Y2 248 aaKnown RBP12.52□□□□□ -0.41
SEMA4F-204ENST00000420077 AGRNO00468 2067 aa12.51□□□□□ -0.41
SEMA4F-204ENST00000420077 JPT2Q9H910 190 aa12.51□□□□□ -0.41
SEMA4F-204ENST00000420077 GCN1Q92616 2671 aaKnown RBP12.51□□□□□ -0.41
SEMA4F-204ENST00000420077 H3BUT2 72 aa12.5□□□□□ -0.41
SEMA4F-204ENST00000420077 GCSHP23434 173 aa12.5□□□□□ -0.41
SEMA4F-204ENST00000420077 BAALCQ8WXS3 180 aa12.5□□□□□ -0.41
SEMA4F-204ENST00000420077 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
SEMA4F-204ENST00000420077 IGHV4-31P0DP07 118 aa12.5□□□□□ -0.41
SEMA4F-204ENST00000420077 FXYD2P54710 66 aa12.5□□□□□ -0.41
SEMA4F-204ENST00000420077 SUMO4Q6EEV6 95 aa12.5□□□□□ -0.41
SEMA4F-204ENST00000420077 MAPKAPK5-AS1Q8N8E1 139 aa12.5□□□□□ -0.41
SEMA4F-204ENST00000420077 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
SEMA4F-204ENST00000420077 UBE2E2Q96LR5 201 aa12.49□□□□□ -0.41
SEMA4F-204ENST00000420077 TRAV12-2A0A075B6T6 113 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms