RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ARL2-SNX15V9GYD0 113 aa10.2□□□□□ -0.78
UBXN4-203ENST00000416538 FBLL1A6NHQ2 334 aaKnown RBP10.19□□□□□ -0.78
UBXN4-203ENST00000416538 TAAR5O14804 337 aa10.19□□□□□ -0.78
UBXN4-203ENST00000416538 TXNDC17Q9BRA2 123 aa10.19□□□□□ -0.78
UBXN4-203ENST00000416538 A0A087WTM6 91 aa10.18□□□□□ -0.78
UBXN4-203ENST00000416538 FAM74A7A6NL05 159 aa10.18□□□□□ -0.78
UBXN4-203ENST00000416538 K7EQM0 130 aa10.18□□□□□ -0.78
UBXN4-203ENST00000416538 PEX7O00628 323 aa10.18□□□□□ -0.78
UBXN4-203ENST00000416538 ARPC5O15511 151 aa10.18□□□□□ -0.78
UBXN4-203ENST00000416538 Q6ZSN1 163 aa10.18□□□□□ -0.78
UBXN4-203ENST00000416538 NHLRC2Q8NBF2 726 aa10.18□□□□□ -0.78
UBXN4-203ENST00000416538 MSRB1Q9NZV6 116 aa10.18□□□□□ -0.78
UBXN4-203ENST00000416538 TIRAPP58753 221 aa10.17□□□□□ -0.78
UBXN4-203ENST00000416538 ERVFC1-1P60608 527 aa10.17□□□□□ -0.78
UBXN4-203ENST00000416538 ZFP69Q49AA0 526 aa10.17□□□□□ -0.78
UBXN4-203ENST00000416538 Q9UF83 564 aa10.17□□□□□ -0.78
UBXN4-203ENST00000416538 MAP1LC3B2A6NCE7 125 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 CRYGDP07320 174 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 LINC00694P0DN24 101 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 FHITP49789 147 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 CRIP1P50238 77 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 Q8N1X5 172 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 Q8N3U1 123 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 PTH2Q96A98 100 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 MAP1LC3BQ9GZQ8 125 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 PARLQ9H300 379 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 JPT2Q9H910 190 aa10.16□□□□□ -0.78
UBXN4-203ENST00000416538 TRBV6-4A0A1B0GX49 114 aa10.15□□□□□ -0.78
UBXN4-203ENST00000416538 IFNA7P01567 189 aa10.15□□□□□ -0.78
UBXN4-203ENST00000416538 PPT1P50897 306 aa10.15□□□□□ -0.78
UBXN4-203ENST00000416538 RHOHQ15669 191 aa10.15□□□□□ -0.78
UBXN4-203ENST00000416538 SAPCD1Q5SSQ6 148 aa10.15□□□□□ -0.78
UBXN4-203ENST00000416538 AKR1C8PQ5T2L2 129 aa10.15□□□□□ -0.78
UBXN4-203ENST00000416538 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
UBXN4-203ENST00000416538 H3BVH4 76 aa10.14□□□□□ -0.79
UBXN4-203ENST00000416538 EVI2AP22794 236 aa10.14□□□□□ -0.79
UBXN4-203ENST00000416538 KRTAP10-1P60331 282 aa10.14□□□□□ -0.79
UBXN4-203ENST00000416538 LINC01556Q5JQF7 62 aa10.14□□□□□ -0.79
UBXN4-203ENST00000416538 UFSP1Q6NVU6 142 aa10.14□□□□□ -0.79
UBXN4-203ENST00000416538 NFE4Q86UQ8 179 aa10.14□□□□□ -0.79
UBXN4-203ENST00000416538 SAMD10Q9BYL1 202 aa10.14□□□□□ -0.79
UBXN4-203ENST00000416538 SH2D1AO60880 128 aa10.13□□□□□ -0.79
UBXN4-203ENST00000416538 OR11H4Q8NGC9 324 aa10.13□□□□□ -0.79
UBXN4-203ENST00000416538 SCRT2Q9NQ03 307 aa10.13□□□□□ -0.79
UBXN4-203ENST00000416538 TRAV9-2A0A087WT02 112 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 LRCOL1A6NCL2 159 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 K7EP13 123 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 M0R036 132 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 MGST1P10620 155 aaKnown RBP10.12□□□□□ -0.79
UBXN4-203ENST00000416538 XGP55808 180 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 COX8CQ7Z4L0 72 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 SH2D6Q7Z4S9 175 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 PRADC1Q9BSG0 188 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 IL36BQ9NZH7 164 aa10.12□□□□□ -0.79
UBXN4-203ENST00000416538 GRIFINA4D1Z8 144 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 FABP5P3A8MUU1 101 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 B4DEV8 164 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 KRBOX1C9JBD0 128 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 IGHV3-30P01768 117 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 IGHV3-33P01772 117 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 IGHV3-30-3P0DP02 117 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 IGHV3-30-5P0DP03 117 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 ASIPP42127 132 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 CDPF1Q6NVV7 123 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 C10orf126Q8N4M7 172 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 KCNRGQ8N5I3 272 aa10.11□□□□□ -0.79
UBXN4-203ENST00000416538 C14orf178Q8N769 122 aaPredicted RBP10.11□□□□□ -0.79
UBXN4-203ENST00000416538 IBA57-AS1B1ANH7 110 aa10.1□□□□□ -0.79
UBXN4-203ENST00000416538 CIDEAO60543 219 aa10.1□□□□□ -0.79
UBXN4-203ENST00000416538 ZNF345Q14585 488 aa10.1□□□□□ -0.79
UBXN4-203ENST00000416538 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
UBXN4-203ENST00000416538 DNLZQ5SXM8 178 aa10.1□□□□□ -0.79
UBXN4-203ENST00000416538 LELP1Q5T871 98 aa10.1□□□□□ -0.79
UBXN4-203ENST00000416538 ATP6V0E2Q8NHE4 81 aa10.1□□□□□ -0.79
UBXN4-203ENST00000416538 FAT1Q14517 4588 aa10.1□□□□□ -0.79
UBXN4-203ENST00000416538 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 A8MWV9 139 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 LTAP01374 205 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
UBXN4-203ENST00000416538 GAGE1Q13065 139 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 GAGE4Q13068 117 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 GAGE5Q13069 117 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 LGALSLQ3ZCW2 172 aaPredicted RBP10.09□□□□□ -0.79
UBXN4-203ENST00000416538 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 PIK3CD-AS1Q5SR53 167 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 ZFP2Q6ZN57 461 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 FMC1Q96HJ9 113 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 NKX6-2Q9C056 277 aaPredicted RBP10.09□□□□□ -0.79
UBXN4-203ENST00000416538 GTSF1LQ9H1H1 148 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 Q9HAA7 133 aa10.09□□□□□ -0.79
UBXN4-203ENST00000416538 TMSB15BA0A087X1C1 80 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 TRAV8-6A0A0B4J262 113 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 TRBV6-1A0A0K0K1D8 114 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 A0A1B0GV50 99 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 EREGO14944 169 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 PAGE4O60829 102 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 ARMS2P0C7Q2 107 aa10.08□□□□□ -0.8
UBXN4-203ENST00000416538 WFDC2Q14508 124 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms