RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ZNF324O75467 553 aaPredicted RBP12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 GZMBP10144 247 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 CTRLP40313 264 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 PLECQ15149 4684 aaKnown RBP12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 DNLZQ5SXM8 178 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 PGLYRP4Q96LB8 373 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 ALMS1Q8TCU4 4167 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 HYDINQ4G0P3 5121 aa12.24□□□□□ -0.45
SCAMP4-204ENST00000414057 MED14OSP0DP75 135 aa12.23□□□□□ -0.45
SCAMP4-204ENST00000414057 RAB5BP61020 215 aa12.23□□□□□ -0.45
SCAMP4-204ENST00000414057 HBBP68871 147 aa12.23□□□□□ -0.45
SCAMP4-204ENST00000414057 RIGQ13278 110 aa12.23□□□□□ -0.45
SCAMP4-204ENST00000414057 MRPL54Q6P161 138 aaKnown RBP12.23□□□□□ -0.45
SCAMP4-204ENST00000414057 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
SCAMP4-204ENST00000414057 TRAV12-3A0A0B4J271 114 aa12.22□□□□□ -0.45
SCAMP4-204ENST00000414057 A0A1B0GXF2 115 aa12.22□□□□□ -0.45
SCAMP4-204ENST00000414057 HLA-DQA1P01909 254 aa12.22□□□□□ -0.45
SCAMP4-204ENST00000414057 KIR3DS1Q14943 382 aa12.22□□□□□ -0.45
SCAMP4-204ENST00000414057 CNFNQ9BYD5 112 aa12.22□□□□□ -0.45
SCAMP4-204ENST00000414057 SPINK4O60575 86 aa12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 OR5AL1P0C617 328 aa12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 ASIPP42127 132 aa12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 LYZL1Q6UWQ5 148 aa12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 ZNF575Q86XF7 245 aa12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 SSBP4Q9BWG4 385 aaPredicted RBP12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 NAGKQ9UJ70 344 aa12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 TRAPPC1Q9Y5R8 145 aa12.21□□□□□ -0.45
SCAMP4-204ENST00000414057 AGRNO00468 2067 aa12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 TRAV12-2A0A075B6T6 113 aa12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 CRXO43186 299 aaPredicted RBP12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 INSP01308 110 aa12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 TRGC2P03986 189 aa12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 MIFP14174 115 aa12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 TCTAP57738 103 aa12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 NANOS2P60321 138 aaKnown RBP12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 ANXA2RQ3ZCQ2 193 aa12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 TMA7Q9Y2S6 64 aaKnown RBP12.21□□□□□ -0.46
SCAMP4-204ENST00000414057 IGHV1OR15-1A0A075B7D0 117 aa12.2□□□□□ -0.46
SCAMP4-204ENST00000414057 GRIFINA4D1Z8 144 aa12.2□□□□□ -0.46
SCAMP4-204ENST00000414057 SNURFLB1AK76 121 aa12.2□□□□□ -0.46
SCAMP4-204ENST00000414057 SNAI2O43623 268 aa12.2□□□□□ -0.46
SCAMP4-204ENST00000414057 Q6ZQT7 251 aa12.2□□□□□ -0.46
SCAMP4-204ENST00000414057 TMEM136Q6ZRR5 245 aa12.2□□□□□ -0.46
SCAMP4-204ENST00000414057 TPPP3Q9BW30 176 aa12.2□□□□□ -0.46
SCAMP4-204ENST00000414057 ARMS2P0C7Q2 107 aa12.19□□□□□ -0.46
SCAMP4-204ENST00000414057 S100A4P26447 101 aaKnown RBP12.19□□□□□ -0.46
SCAMP4-204ENST00000414057 CACNG7P62955 275 aa12.19□□□□□ -0.46
SCAMP4-204ENST00000414057 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
SCAMP4-204ENST00000414057 GATD1Q8NB37 220 aa12.19□□□□□ -0.46
SCAMP4-204ENST00000414057 LINC00467Q9BRT7 94 aa12.19□□□□□ -0.46
SCAMP4-204ENST00000414057 DEFB4AO15263 64 aa12.18□□□□□ -0.46
SCAMP4-204ENST00000414057 GIG44P09565 113 aaPredicted RBP12.18□□□□□ -0.46
SCAMP4-204ENST00000414057 RAB4BP61018 213 aa12.18□□□□□ -0.46
SCAMP4-204ENST00000414057 MUC21Q5SSG8 566 aa12.18□□□□□ -0.46
SCAMP4-204ENST00000414057 LGALS9CQ6DKI2 356 aa12.18□□□□□ -0.46
SCAMP4-204ENST00000414057 Q8NAQ8 132 aa12.18□□□□□ -0.46
SCAMP4-204ENST00000414057 FRZBQ92765 325 aa12.18□□□□□ -0.46
SCAMP4-204ENST00000414057 TRGV11A0A075B6L2 103 aa12.17□□□□□ -0.46
SCAMP4-204ENST00000414057 IGHV4-4A0A075B6R2 117 aa12.17□□□□□ -0.46
SCAMP4-204ENST00000414057 PHOX2AO14813 284 aa12.17□□□□□ -0.46
SCAMP4-204ENST00000414057 CAMPP49913 170 aa12.17□□□□□ -0.46
SCAMP4-204ENST00000414057 FXYD7P58549 80 aa12.17□□□□□ -0.46
SCAMP4-204ENST00000414057 FABP9Q0Z7S8 132 aa12.17□□□□□ -0.46
SCAMP4-204ENST00000414057 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
SCAMP4-204ENST00000414057 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
SCAMP4-204ENST00000414057 ZNF493Q6ZR52 646 aa12.16□□□□□ -0.46
SCAMP4-204ENST00000414057 SCRT2Q9NQ03 307 aa12.16□□□□□ -0.46
SCAMP4-204ENST00000414057 EPPK1P58107 5090 aaKnown RBP12.15□□□□□ -0.46
SCAMP4-204ENST00000414057 H3BVH4 76 aa12.15□□□□□ -0.46
SCAMP4-204ENST00000414057 APCSP02743 223 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 NTF3P20783 257 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 TWIST1Q15672 202 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 CSNK1G2-AS1Q8NCQ2 148 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 PHLDA3Q9Y5J5 127 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 X6R8D5 127 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 GNRH2O43555 120 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BKO60814 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BJP06899 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BOP23527 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BBP33778 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BDP58876 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BCP62807 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 RBMY1FQ15415 496 aaKnown RBP12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST2H2BEQ16778 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 SPANXN1Q5VSR9 72 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BHQ93079 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BNQ99877 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 HIST1H2BMQ99879 126 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 XCL2Q9UBD3 114 aa12.14□□□□□ -0.47
SCAMP4-204ENST00000414057 IGHV3-16A0A0C4DH30 117 aa12.13□□□□□ -0.47
SCAMP4-204ENST00000414057 CBY3A6NI87 242 aa12.13□□□□□ -0.47
SCAMP4-204ENST00000414057 TRGC1P0CF51 173 aa12.13□□□□□ -0.47
SCAMP4-204ENST00000414057 SMIM15Q7Z3B0 74 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms