RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 NBEAQ8NFP9 2946 aa1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 SMG1Q96Q15 3661 aaKnown RBP1.72□□□□□ -2.13
HMGB1P11-201ENST00000413899 USP9XQ93008 2570 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 SPTBN1Q01082 2364 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRBV24-1A0A075B6N3 115 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGHV6-1A0A0B4J1U7 121 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 A0A1W2PRF3 423 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 A0A1W2PRM7 423 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 OOSP1A8MZH6 123 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 C9JCJ5 164 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 CLDN34H7C241 214 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 SLC17A3O00476 420 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 SIVA1O15304 175 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 ENSAO43768 121 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 GGCTO75223 188 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 MT-CO2P00403 227 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 HLA-DRB1P01911 266 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 TYMSP04818 313 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 OR10J4P0C629 311 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGLC2P0DOY2 106 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 PYYP10082 97 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 SFTPCP11686 197 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 CD24P25063 80 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 IL3RAP26951 378 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 PSMB3P49720 205 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 EFNA4P52798 201 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 UBE2G2P60604 165 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 ARF6P62330 175 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 TNXAQ16473 311 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 KRTAP6-3Q3LI67 103 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 VMA21Q3ZAQ7 101 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 MINOS1Q5TGZ0 78 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 TCF24Q7RTU0 167 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 ADM2Q7Z4H4 148 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZFP82Q8N141 532 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 FAM24BQ8N5W8 94 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 C5orf56Q8N8D9 126 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 VSTM2AQ8TAG5 236 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 SCGB1C1Q8TD33 95 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 RNASEH2CQ8TDP1 164 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 C10orf105Q8TEF2 133 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 ZCCHC13Q8WW36 166 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 TRGV9Q99603 122 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 SMIM7Q9BQ49 75 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 FAM103A1Q9BTL3 118 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 PBDC1Q9BVG4 233 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 HINT2Q9BX68 163 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 MRPL32Q9BYC8 188 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 COMMD5Q9GZQ3 224 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 EIF5A2Q9GZV4 153 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 RAB1BQ9H0U4 201 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 NPVFQ9HCQ7 196 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 SMCO4Q9NRQ5 59 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 KCNIP2Q9NS61 270 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 DOK5Q9P104 306 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 METTL1Q9UBP6 276 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 NAT8Q9UHE5 227 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 FUT9Q9Y231 359 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 AMMECR1Q9Y4X0 333 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 INSIG2Q9Y5U4 225 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 MINOS1-NBL1R4GNA1 71 aa1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 PRRC2CQ9Y520 2896 aaKnown RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 RP1L1Q8IWN7 2480 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P11-201ENST00000413899 LRBAP50851 2863 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 NBASA2RRP1 2371 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 IGHV3-21A0A0B4J1V1 117 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 MDFIC2A0A1B0GVS7 189 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 CLPSL1A2RUU4 121 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 B4DEV8 164 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 C17orf112F2Z3M2 114 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 F6UZH7 168 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 M0R036 132 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BKO60814 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 CXorf1O96002 111 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 MBP02144 154 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 MT-ND4LP03901 98 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 IFNA4P05014 189 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BJP06899 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 CD99P14209 185 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BOP23527 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BBP33778 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 LGALS7P47929 136 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BDP58876 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 RHOBP62745 196 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST1H2BCP62807 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 GNG5P63218 68 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 UBE2L3P68036 154 aaKnown RBP1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 LCN2P80188 198 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 MMDQ15546 238 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 USF2Q15853 346 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST2H2BEQ16778 126 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 AKIRIN2Q53H80 203 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 CENPWQ5EE01 88 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 ACTL10Q5JWF8 245 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 FAM78BQ5VT40 261 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 DAZ4Q86SG3 579 aaKnown RBP1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 Q86TA4 180 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 GPHB5Q86YW7 130 aa1.7□□□□□ -2.14
HMGB1P11-201ENST00000413899 OR4X1Q8NH49 305 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms