RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CMYA5Q8N3K9 4069 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 IGHV4-4A0A075B6R2 117 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 G3V4G9 280 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 NXPH4O95158 308 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 RIPPLY3P57055 190 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 RAB5BP61020 215 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 CACNG7P62955 275 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 FABP9Q0Z7S8 132 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 SLAQ13239 276 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 TWIST1Q15672 202 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 SAMD5Q5TGI4 173 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 ZNF493Q6ZR52 646 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 ZFP82Q8N141 532 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 TMEM256Q8N2U0 113 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 CSNK1G2-AS1Q8NCQ2 148 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 FRZBQ92765 325 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 LINC01587Q99440 93 aa4.84□□□□□ -1.63
VPS41-204ENST00000413141 ZMAT5Q9UDW3 170 aaKnown RBP4.84□□□□□ -1.63
VPS41-204ENST00000413141 TIMM8BQ9Y5J9 83 aaPredicted RBP4.84□□□□□ -1.63
VPS41-204ENST00000413141 LOC102724200A0A096LPH7 203 aaPredicted RBP4.83□□□□□ -1.64
VPS41-204ENST00000413141 KIR2DL5BA0A0G2JN68 375 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 KIR2DL5BA0A0G2JPC4 375 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 M0R381 172 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 SPRY2O43597 315 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BKO60814 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 APCSP02743 223 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BJP06899 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 TRGC1P0CF51 173 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 IGHV4-30-4P0DP06 118 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 NTF3P20783 257 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BOP23527 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BBP33778 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BDP58876 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 SSTP61278 116 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BCP62807 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 ZNF415Q09FC8 603 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST2H2BEQ16778 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.83□□□□□ -1.64
VPS41-204ENST00000413141 SPANXN1Q5VSR9 72 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 ZNF705AQ6ZN79 300 aaPredicted RBP4.83□□□□□ -1.64
VPS41-204ENST00000413141 KIR2DL5AQ8N109 375 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 C11orf72Q8NBR9 251 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 KIR2DL5BQ8NHK3 375 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BHQ93079 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BNQ99877 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 HIST1H2BMQ99879 126 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 TMEM208Q9BTX3 173 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 CSTL1Q9H114 145 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 MSRB1Q9NZV6 116 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 MDFICQ9P1T7 246 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 GOLT1BQ9Y3E0 138 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 PHLDA3Q9Y5J5 127 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 NOTCH3Q9UM47 2321 aa4.83□□□□□ -1.64
VPS41-204ENST00000413141 IGHV3OR16-12A0A075B7B8 117 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 PRM2P04554 102 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 HTN1P15515 57 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 APOC4P55056 127 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 IL17DQ8TAD2 202 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 RNASE8Q8TDE3 154 aaKnown RBP4.82□□□□□ -1.64
VPS41-204ENST00000413141 AP1S3Q96PC3 154 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 TMEM191AQ9H0A3 160 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 DNAH3Q8TD57 4116 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 PKD1L1Q8TDX9 2849 aa4.82□□□□□ -1.64
VPS41-204ENST00000413141 A8MZ25 164 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 AZU1P20160 251 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 EVI2AP22794 236 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 KIAA1644Q3SXP7 199 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 FAM104BQ5XKR9 115 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 AMN1Q8IY45 258 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 SYT8Q8NBV8 401 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 TMEM263Q8WUH6 116 aaKnown RBP4.81□□□□□ -1.64
VPS41-204ENST00000413141 RNF185Q96GF1 192 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 GSN-AS1Q9NRJ2 163 aa4.81□□□□□ -1.64
VPS41-204ENST00000413141 PLAC8L1A1L4L8 177 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 SRIP30626 198 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 RRN3P1Q2M238 152 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 DEFB135Q30KP9 77 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 KPRPQ5T749 579 aaPredicted RBP4.8□□□□□ -1.64
VPS41-204ENST00000413141 SMIM15Q7Z3B0 74 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 PTH2Q96A98 100 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 C16orf74Q96GX8 76 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 RCHY1Q96PM5 261 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
VPS41-204ENST00000413141 SPXQ9BT56 116 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 DPH3P1Q9H4G8 78 aa4.8□□□□□ -1.64
VPS41-204ENST00000413141 D6R8Y8 96 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 M0R2P5 195 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 UBE2CO00762 179 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 NCR2O95944 276 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 S100A6P06703 90 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 RAB4AP20338 218 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 KRTAP21-3Q3LHN1 58 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 ZNF876PQ49A33 203 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 MRPL51Q4U2R6 128 aaKnown RBP4.79□□□□□ -1.64
VPS41-204ENST00000413141 PIK3CD-AS1Q5SR53 167 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 C14orf178Q8N769 122 aaPredicted RBP4.79□□□□□ -1.64
VPS41-204ENST00000413141 NDUFAF3Q9BU61 184 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 JPT2Q9H910 190 aa4.79□□□□□ -1.64
VPS41-204ENST00000413141 MRPL16Q9NX20 251 aaKnown RBP4.79□□□□□ -1.64
VPS41-204ENST00000413141 KIF25-AS1Q9Y6Z4 181 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 425.9 ms