RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 PRCDQ00LT1 54 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 MRGPRG-AS1Q2M3A8 158 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 TMEM97Q5BJF2 176 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 C2orf91Q6ZV80 131 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 MIR17HGQ75NE6 70 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 BOD1L2Q8IYS8 172 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 THAP8Q8NA92 274 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 SRSF12Q8WXF0 261 aaKnown RBP3.99□□□□□ -1.77
LINC00342-201ENST00000412393 GPR82Q96P67 336 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 SIGMAR1Q99720 223 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 FAM110AQ9BQ89 295 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 MAP1LC3CQ9BXW4 147 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 RNASE7Q9H1E1 156 aaKnown RBP3.99□□□□□ -1.77
LINC00342-201ENST00000412393 SIGLEC8Q9NYZ4 499 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 HIGD1BQ9P298 99 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 SMAD5-AS1Q9Y6J3 95 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 U3KQK5 164 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 COL7A1Q02388 2944 aa3.99□□□□□ -1.77
LINC00342-201ENST00000412393 IGKV1OR2-108A0A075B7D4 117 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 LOC102724200A0A096LPH7 203 aaPredicted RBP3.98□□□□□ -1.77
LINC00342-201ENST00000412393 TRAV8-6A0A0B4J262 113 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 IGHV1-24A0A0C4DH33 117 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 C7orf71A4D174 169 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 A6NDN8 102 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 LINC01546A6NGU7 62 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 OR2T8A6NH00 312 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 K7EP34 96 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 UPK2O00526 184 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 BRI3O95415 125 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 APOHP02749 345 aaPredicted RBP3.98□□□□□ -1.77
LINC00342-201ENST00000412393 CLEC3BP05452 202 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 SAA1P0DJI8 122 aaPredicted RBP3.98□□□□□ -1.77
LINC00342-201ENST00000412393 FGF6P10767 208 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 DEFA4P12838 97 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 HLA-DRB4P13762 266 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 GP9P14770 177 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 S100A7P31151 101 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 ARL3P36405 182 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 PLP1P60201 277 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 CKS1BP61024 79 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 LGALS9BQ3B8N2 356 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 KIAA1644Q3SXP7 199 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 Q56UQ5 140 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 C10orf55Q5SWW7 151 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 SPATA31B1PQ5VZV4 182 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 LGALS9CQ6DKI2 356 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 FOXI2Q6ZQN5 318 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 ZNF493Q6ZR52 646 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 RBPMS2Q6ZRY4 209 aaKnown RBP3.98□□□□□ -1.77
LINC00342-201ENST00000412393 FA2HQ7L5A8 372 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 COX8CQ7Z4L0 72 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 VKORC1L1Q8N0U8 176 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 OR1L4Q8NGR5 311 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 VSTM2AQ8TAG5 236 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 USMG5Q96IX5 58 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 AP1S3Q96PC3 154 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 ASCL2Q99929 193 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 EPDR1Q9UM22 224 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 HLA-DRB4X5D2U9 266 aa3.98□□□□□ -1.77
LINC00342-201ENST00000412393 MUC21A0A0G2JKD1 596 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 MUC21A0A140T8X8 626 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 FAM223BA6NKX1 122 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 HIGD1CA8MV81 97 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 F5H697 171 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 PEX7O00628 323 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 ZNF207O43670 478 aaKnown RBP3.97□□□□□ -1.77
LINC00342-201ENST00000412393 TSPAN13O95857 204 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 LTAP01374 205 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 IGLV1-51P01701 117 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 TRBV12-3P01733 135 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 NTF3P20783 257 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 RPL27AP46776 148 aaKnown RBP3.97□□□□□ -1.77
LINC00342-201ENST00000412393 CSN1S1P47710 185 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 CRYBA4P53673 196 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 SYNJ2BPP57105 145 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 RPL8P62917 257 aaKnown RBP3.97□□□□□ -1.77
LINC00342-201ENST00000412393 ATP5G2Q06055 141 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 HSD52Q0P140 79 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 MUC21Q5SSG8 566 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 Q6AWC8 147 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 BPIFA4PQ86YQ2 179 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 FAM223AQ8IWN6 122 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 TTC9CQ8N5M4 171 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 C5orf17Q8NAS9 161 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 OR2K2Q8NGT1 345 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 OR4A5Q8NH83 315 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 TMEM167AQ8TBQ9 72 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 FMC1Q96HJ9 113 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 SLC25A2Q9BXI2 301 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 RPP21Q9H633 154 aaKnown RBP3.97□□□□□ -1.77
LINC00342-201ENST00000412393 RABAC1Q9UI14 185 aa3.97□□□□□ -1.77
LINC00342-201ENST00000412393 HUWE1Q7Z6Z7 4374 aaKnown RBP3.97□□□□□ -1.77
LINC00342-201ENST00000412393 TRAV26-1A0A087WT03 109 aa3.96□□□□□ -1.78
LINC00342-201ENST00000412393 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.96□□□□□ -1.78
LINC00342-201ENST00000412393 TEX50A0A1B0GTY4 177 aa3.96□□□□□ -1.78
LINC00342-201ENST00000412393 NPIPB5A8MRT5 1133 aa3.96□□□□□ -1.78
LINC00342-201ENST00000412393 TEX22C9J3V5 150 aa3.96□□□□□ -1.78
LINC00342-201ENST00000412393 E7EUB6 86 aa3.96□□□□□ -1.78
LINC00342-201ENST00000412393 F8W1H4 67 aa3.96□□□□□ -1.78
LINC00342-201ENST00000412393 K7EQM0 130 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms