RNA–Protein interactions for RNA: ENST00000411956.1

AP001056.1-201, humanhuman

TSL 3 BASIC

Gene AP001056.1, Length 821 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001056.1-201ENST00000411956 Q6ZTI0 123 aa11.24□□□□□ -0.61
AP001056.1-201ENST00000411956 LINC00612Q8N6U2 182 aa11.24□□□□□ -0.61
AP001056.1-201ENST00000411956 CLRN3Q8NCR9 226 aa11.24□□□□□ -0.61
AP001056.1-201ENST00000411956 TSKUQ8WUA8 353 aa11.24□□□□□ -0.61
AP001056.1-201ENST00000411956 ANAPC16Q96DE5 110 aa11.24□□□□□ -0.61
AP001056.1-201ENST00000411956 SSBP4Q9BWG4 385 aaPredicted RBP11.24□□□□□ -0.61
AP001056.1-201ENST00000411956 A0A1W2PPQ1 181 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 CXorf65A6NEN9 183 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 CTRLP40313 264 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 LGALS9BQ3B8N2 356 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 SVBPQ8N300 66 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 GFRA4Q9GZZ7 299 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
AP001056.1-201ENST00000411956 NBEAL2Q6ZNJ1 2754 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 COL7A1Q02388 2944 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 GAGE7O76087 117 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 RHEBQ15382 184 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 LYZL1Q6UWQ5 148 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 C11orf45Q8TAV5 145 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 RASL10AQ92737 203 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 PTH2Q96A98 100 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 TENM3Q9P273 2699 aa11.22□□□□□ -0.61
AP001056.1-201ENST00000411956 MUC21A0A0G2JKD1 596 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 MUC21A0A140T8X8 626 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 SMIM27A0A1W2PRY6 76 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 C7orf77A4D0Y5 90 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 FAM231BA6NCW3 169 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 HIGD1CA8MV81 97 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 NXPH4O95158 308 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 SNAPINO95295 136 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 DEFB130BP0DP73 79 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 DEFB130AP0DP74 79 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 NANOS2P60321 138 aaKnown RBP11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 DAD1P61803 113 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 C12orf74Q32Q52 190 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 ZNF876PQ49A33 203 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 ZFP82Q8N141 532 aa11.21□□□□□ -0.61
AP001056.1-201ENST00000411956 F2Z2F3 143 aa11.2□□□□□ -0.62
AP001056.1-201ENST00000411956 M0R381 172 aa11.2□□□□□ -0.62
AP001056.1-201ENST00000411956 FOXA3P55318 350 aaPredicted RBP11.2□□□□□ -0.62
AP001056.1-201ENST00000411956 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
AP001056.1-201ENST00000411956 SYT8Q8NBV8 401 aa11.2□□□□□ -0.62
AP001056.1-201ENST00000411956 PGLYRP4Q96LB8 373 aa11.2□□□□□ -0.62
AP001056.1-201ENST00000411956 CTDSP1Q9GZU7 261 aa11.2□□□□□ -0.62
AP001056.1-201ENST00000411956 CACNG7P62955 275 aa11.19□□□□□ -0.62
AP001056.1-201ENST00000411956 PIK3CD-AS1Q5SR53 167 aa11.19□□□□□ -0.62
AP001056.1-201ENST00000411956 SPANXN1Q5VSR9 72 aa11.19□□□□□ -0.62
AP001056.1-201ENST00000411956 C18orf15Q96N68 181 aa11.19□□□□□ -0.62
AP001056.1-201ENST00000411956 NDUFAF3Q9BU61 184 aa11.19□□□□□ -0.62
AP001056.1-201ENST00000411956 CNFNQ9BYD5 112 aa11.19□□□□□ -0.62
AP001056.1-201ENST00000411956 RPS10P5Q9NQ39 176 aa11.19□□□□□ -0.62
AP001056.1-201ENST00000411956 NAT8BQ9UHF3 227 aa11.19□□□□□ -0.62
AP001056.1-201ENST00000411956 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
AP001056.1-201ENST00000411956 A0A087WWC5 75 aa11.18□□□□□ -0.62
AP001056.1-201ENST00000411956 Q6ZTC4 211 aa11.18□□□□□ -0.62
AP001056.1-201ENST00000411956 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
AP001056.1-201ENST00000411956 IGHV4-4A0A075B6R2 117 aa11.17□□□□□ -0.62
AP001056.1-201ENST00000411956 SSTP61278 116 aa11.17□□□□□ -0.62
AP001056.1-201ENST00000411956 WDR73Q6P4I2 378 aa11.17□□□□□ -0.62
AP001056.1-201ENST00000411956 POM121L12Q8N7R1 296 aa11.17□□□□□ -0.62
AP001056.1-201ENST00000411956 MUC4Q99102 2169 aa11.17□□□□□ -0.62
AP001056.1-201ENST00000411956 TRAV4A0A0B4J268 109 aa11.16□□□□□ -0.62
AP001056.1-201ENST00000411956 RS1O15537 224 aa11.16□□□□□ -0.62
AP001056.1-201ENST00000411956 ATRAIDQ6UW56 229 aa11.16□□□□□ -0.62
AP001056.1-201ENST00000411956 BORCS7Q96B45 105 aa11.16□□□□□ -0.62
AP001056.1-201ENST00000411956 JPT2Q9H910 190 aa11.16□□□□□ -0.62
AP001056.1-201ENST00000411956 TMEM242Q9NWH2 141 aa11.16□□□□□ -0.62
AP001056.1-201ENST00000411956 MSRB1Q9NZV6 116 aa11.16□□□□□ -0.62
AP001056.1-201ENST00000411956 A0A1B0GUT8 65 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 A8MWV9 139 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 IGHV3-53P01767 116 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 ATP5G1P05496 136 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 NTF3P20783 257 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 OR4C5Q8NGB2 326 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 AP1S3Q96PC3 154 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 IMMP2LQ96T52 175 aa11.15□□□□□ -0.62
AP001056.1-201ENST00000411956 TWIST1Q15672 202 aa11.14□□□□□ -0.63
AP001056.1-201ENST00000411956 ZNF479Q96JC4 524 aa11.14□□□□□ -0.63
AP001056.1-201ENST00000411956 SAMD10Q9BYL1 202 aa11.14□□□□□ -0.63
AP001056.1-201ENST00000411956 ATP6V1G1O75348 118 aa11.13□□□□□ -0.63
AP001056.1-201ENST00000411956 TRGC1P0CF51 173 aa11.13□□□□□ -0.63
AP001056.1-201ENST00000411956 HTN3P15516 51 aa11.13□□□□□ -0.63
AP001056.1-201ENST00000411956 KCNIP4Q6PIL6 250 aa11.13□□□□□ -0.63
AP001056.1-201ENST00000411956 WWC2-AS2Q96NR7 200 aa11.13□□□□□ -0.63
AP001056.1-201ENST00000411956 A0A087WWL8 130 aa11.12□□□□□ -0.63
AP001056.1-201ENST00000411956 TRAV10A0A0B4J240 114 aa11.12□□□□□ -0.63
AP001056.1-201ENST00000411956 HOXA5P20719 270 aa11.12□□□□□ -0.63
AP001056.1-201ENST00000411956 RIGQ13278 110 aa11.12□□□□□ -0.63
AP001056.1-201ENST00000411956 FAM74A4Q5TZK3 123 aa11.12□□□□□ -0.63
AP001056.1-201ENST00000411956 UFSP1Q6NVU6 142 aa11.12□□□□□ -0.63
AP001056.1-201ENST00000411956 MRPL54Q6P161 138 aaKnown RBP11.12□□□□□ -0.63
AP001056.1-201ENST00000411956 DEFB131BA0A096LNP1 70 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms