RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 TMEM70Q9BUB7 260 aa13.02□□□□□ -0.32
LRPPRC-203ENST00000409946 SIGLEC8Q9NYZ4 499 aa13.02□□□□□ -0.32
LRPPRC-203ENST00000409946 IGHV1-24A0A0C4DH33 117 aa13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 A0A1B0GV90 55 aa13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 OR4C46A6NHA9 309 aa13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 DUSP14O95147 198 aaKnown RBP13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 LEPP41159 167 aa13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 TWIST1Q15672 202 aa13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 AMTNQ6UX39 209 aa13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 ODF3Q96PU9 254 aa13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 TIMM8BQ9Y5J9 83 aaPredicted RBP13.02□□□□□ -0.33
LRPPRC-203ENST00000409946 H3BVH4 76 aa13.01□□□□□ -0.33
LRPPRC-203ENST00000409946 EREGO14944 169 aa13.01□□□□□ -0.33
LRPPRC-203ENST00000409946 SPRY2O43597 315 aa13.01□□□□□ -0.33
LRPPRC-203ENST00000409946 OR10AG1Q8NH19 301 aa13.01□□□□□ -0.33
LRPPRC-203ENST00000409946 U3KQK5 164 aa13.01□□□□□ -0.33
LRPPRC-203ENST00000409946 TRAV25A0A0B4J276 109 aa13□□□□□ -0.33
LRPPRC-203ENST00000409946 C7orf71A4D174 169 aa13□□□□□ -0.33
LRPPRC-203ENST00000409946 RBMY1BA6NDE4 496 aaKnown RBP13□□□□□ -0.33
LRPPRC-203ENST00000409946 RBMY1EA6NEQ0 496 aaKnown RBP13□□□□□ -0.33
LRPPRC-203ENST00000409946 RBMY1DP0C7P1 496 aaKnown RBP13□□□□□ -0.33
LRPPRC-203ENST00000409946 ODF3L2Q3SX64 289 aa13□□□□□ -0.33
LRPPRC-203ENST00000409946 LINC00469Q8N7U9 141 aa13□□□□□ -0.33
LRPPRC-203ENST00000409946 GNRH2O43555 120 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 LEPROTL1O95214 131 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 PF4P02776 101 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 HLA-DRB4P13762 266 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 FAM104BQ5XKR9 115 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 UQCR10Q9UDW1 63 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 HLA-DRB4X5D2U9 266 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 TRAV9-2A0A087WT02 112 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 H3BMM0 161 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 CDKN1BP46527 198 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 CNFNQ9BYD5 112 aa12.99□□□□□ -0.33
LRPPRC-203ENST00000409946 JMJD1CQ15652 2540 aa12.98□□□□□ -0.33
LRPPRC-203ENST00000409946 IGLC3P0DOY3 106 aa12.98□□□□□ -0.33
LRPPRC-203ENST00000409946 AMN1Q8IY45 258 aa12.98□□□□□ -0.33
LRPPRC-203ENST00000409946 HSPB8Q9UJY1 196 aa12.98□□□□□ -0.33
LRPPRC-203ENST00000409946 MUC4Q99102 2169 aa12.97□□□□□ -0.33
LRPPRC-203ENST00000409946 SYS1-DBNDD2H3BUS1 97 aa12.97□□□□□ -0.33
LRPPRC-203ENST00000409946 LINC00482Q8N8I6 264 aa12.97□□□□□ -0.33
LRPPRC-203ENST00000409946 SPATA3Q8NHX4 192 aa12.97□□□□□ -0.33
LRPPRC-203ENST00000409946 AP5S1Q9NUS5 200 aa12.97□□□□□ -0.33
LRPPRC-203ENST00000409946 SNAI2O43623 268 aa12.97□□□□□ -0.33
LRPPRC-203ENST00000409946 IGLV1-51P01701 117 aa12.97□□□□□ -0.33
LRPPRC-203ENST00000409946 ASIPP42127 132 aa12.97□□□□□ -0.33
LRPPRC-203ENST00000409946 A8MTW9 85 aa12.96□□□□□ -0.33
LRPPRC-203ENST00000409946 TSPOP30536 169 aa12.96□□□□□ -0.33
LRPPRC-203ENST00000409946 NUTF2P61970 127 aaKnown RBP12.96□□□□□ -0.33
LRPPRC-203ENST00000409946 ORMDL3Q8N138 153 aa12.96□□□□□ -0.33
LRPPRC-203ENST00000409946 RBMY1A1P0DJD3 496 aaKnown RBP12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 RBMY1CP0DJD4 496 aa12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 RBMY1FQ15415 496 aaKnown RBP12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 PET117Q6UWS5 81 aa12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 FAM159AQ6UWV7 190 aa12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 FA2HQ7L5A8 372 aa12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 PRSS3P2Q8NHM4 247 aa12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 MAP1LC3CQ9BXW4 147 aa12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 NIPBLQ6KC79 2804 aaeCLIP12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 RNASE3P12724 160 aaKnown RBP12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 TMEM191AQ9H0A3 160 aa12.95□□□□□ -0.34
LRPPRC-203ENST00000409946 TENM1Q9UKZ4 2725 aa12.94□□□□□ -0.34
LRPPRC-203ENST00000409946 TEP1Q99973 2627 aaKnown RBP12.94□□□□□ -0.34
LRPPRC-203ENST00000409946 D6R8Y8 96 aa12.94□□□□□ -0.34
LRPPRC-203ENST00000409946 SPANXN1Q5VSR9 72 aa12.94□□□□□ -0.34
LRPPRC-203ENST00000409946 PRELID3AQ96N28 172 aa12.94□□□□□ -0.34
LRPPRC-203ENST00000409946 CITED1Q99966 193 aa12.94□□□□□ -0.34
LRPPRC-203ENST00000409946 OR11H12B2RN74 326 aa12.93□□□□□ -0.34
LRPPRC-203ENST00000409946 CD7P09564 240 aa12.93□□□□□ -0.34
LRPPRC-203ENST00000409946 MRPL51Q4U2R6 128 aaKnown RBP12.93□□□□□ -0.34
LRPPRC-203ENST00000409946 SPATA12Q7Z6I5 190 aa12.93□□□□□ -0.34
LRPPRC-203ENST00000409946 ATOH7Q8N100 152 aa12.93□□□□□ -0.34
LRPPRC-203ENST00000409946 WFDC10AQ9H1F0 79 aa12.93□□□□□ -0.34
LRPPRC-203ENST00000409946 SMKR1H3BMG3 65 aa12.92□□□□□ -0.34
LRPPRC-203ENST00000409946 M0R381 172 aa12.92□□□□□ -0.34
LRPPRC-203ENST00000409946 EVI2AP22794 236 aa12.92□□□□□ -0.34
LRPPRC-203ENST00000409946 LINC00173Q6ZV60 143 aa12.92□□□□□ -0.34
LRPPRC-203ENST00000409946 RNF185Q96GF1 192 aa12.92□□□□□ -0.34
LRPPRC-203ENST00000409946 NCR2O95944 276 aa12.92□□□□□ -0.34
LRPPRC-203ENST00000409946 PPBPP02775 128 aa12.92□□□□□ -0.34
LRPPRC-203ENST00000409946 CACNG7P62955 275 aa12.91□□□□□ -0.34
LRPPRC-203ENST00000409946 Q6ZN92 141 aa12.91□□□□□ -0.34
LRPPRC-203ENST00000409946 ST20Q9HBF5 79 aa12.91□□□□□ -0.34
LRPPRC-203ENST00000409946 SCRT2Q9NQ03 307 aa12.91□□□□□ -0.34
LRPPRC-203ENST00000409946 LAMTOR2Q9Y2Q5 125 aa12.91□□□□□ -0.34
LRPPRC-203ENST00000409946 PHLDA3Q9Y5J5 127 aa12.91□□□□□ -0.34
LRPPRC-203ENST00000409946 ATRQ13535 2644 aa12.91□□□□□ -0.34
LRPPRC-203ENST00000409946 IGHV4-4A0A075B6R2 117 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 IGHV1OR15-1A0A075B7D0 117 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 GAS8-AS1O95177 125 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 IGLL1P15814 213 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 IFI27P40305 119 aaPredicted RBP12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 MAJINQ3KP22 176 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 Q8N1Y9 231 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 ZNF747Q9BV97 191 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 MRPS16Q9Y3D3 137 aaKnown RBP12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 MED14OSP0DP75 135 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 CKS2P33552 79 aa12.9□□□□□ -0.34
LRPPRC-203ENST00000409946 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms