RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 DSCAMO60469 2012 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 COX8AP10176 69 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 PRIMA1Q86XR5 153 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 NDUFA11Q86Y39 141 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 IGF2BP2-AS1Q96M15 143 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 DEFB136Q30KP8 78 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 LGALS9BQ3B8N2 356 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 LGALS9CQ6DKI2 356 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 PATE2Q6UY27 113 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 C9orf47Q6ZRZ4 202 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 SIGLEC8Q9NYZ4 499 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 TRAV8-2A0A0B4J237 113 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 SCGB1A1P11684 91 aa13□□□□□ -0.33
PCDHA13-202ENST00000409494 FANCD2OSQ96PS1 177 aa12.99□□□□□ -0.33
PCDHA13-202ENST00000409494 PTPN13Q12923 2485 aa12.99□□□□□ -0.33
PCDHA13-202ENST00000409494 ZNF561-AS1K7EIQ3 104 aa12.99□□□□□ -0.33
PCDHA13-202ENST00000409494 KMT2EQ8IZD2 1858 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 LEPROTO15243 131 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 PAX2Q02962 417 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 C22orf34Q6ZV56 151 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 C17orf77Q96MU5 243 aa12.98□□□□□ -0.33
PCDHA13-202ENST00000409494 LGALS9O00182 355 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 U3KQE9 123 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 CFHR4Q92496 578 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 ATP5G1P05496 136 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 PIFOQ8TCI5 191 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 CST9LQ9H4G1 147 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 NAV2Q8IVL1 2488 aa12.97□□□□□ -0.33
PCDHA13-202ENST00000409494 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
PCDHA13-202ENST00000409494 FAM167A-AS1Q96KT0 104 aa12.96□□□□□ -0.33
PCDHA13-202ENST00000409494 KLF12Q9Y4X4 402 aa12.96□□□□□ -0.33
PCDHA13-202ENST00000409494 ESDP10768 282 aa12.96□□□□□ -0.33
PCDHA13-202ENST00000409494 NPYP01303 97 aa12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 EGR2P11161 476 aaPredicted RBP12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 MRPL23Q16540 153 aaKnown RBP12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 MORN5Q5VZ52 161 aa12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 DEFB104AQ8WTQ1 72 aa12.96□□□□□ -0.34
PCDHA13-202ENST00000409494 IGHV3-16A0A0C4DH30 117 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 HLA-DRB4P13762 266 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 HERVK_113P63121 156 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 CFHR3Q02985 330 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 OCIAD2Q56VL3 154 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 HLA-DRB4X5D2U9 266 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 ATXN8Q156A1 80 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 NAV3Q8IVL0 2385 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 TSPAN13O95857 204 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 DLX4Q92988 240 aaPredicted RBP12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 LY6LH3BQJ8 138 aa12.95□□□□□ -0.34
PCDHA13-202ENST00000409494 C9orf118A6NHY6 69 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 F6UB75 175 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 HLA-DMBP28068 263 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 IGF2RP11717 2491 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 ARHGAP21Q5T5U3 1957 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 IL17DQ8TAD2 202 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 NOP10Q9NPE3 64 aaKnown RBP12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 PGPEP1Q9NXJ5 209 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 WFDC11Q8NEX6 87 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 ZNF747Q9BV97 191 aa12.94□□□□□ -0.34
PCDHA13-202ENST00000409494 ZNF295-AS1Q8N0V1 137 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 CITED2Q99967 270 aaPredicted RBP12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 PROP1O75360 226 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 TDRG1Q3Y452 100 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 BVES-AS1Q5T3Y7 98 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 ODF3Q96PU9 254 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 SPANXA1Q9NS26 97 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 IGKV1OR2-108A0A075B7D4 117 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 MBD6Q96DN6 1003 aa12.93□□□□□ -0.34
PCDHA13-202ENST00000409494 C10orf126Q8N4M7 172 aa12.92□□□□□ -0.34
PCDHA13-202ENST00000409494 F8VRH5 84 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 SHISA2Q6UWI4 295 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 CRYGBP07316 175 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 BOD1L2Q8IYS8 172 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 PLA2G2AP14555 144 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 DAZ2Q13117 558 aaKnown RBP12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 DAZ4Q86SG3 579 aaKnown RBP12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 DAZ3Q9NR90 486 aaKnown RBP12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 ICOSQ9Y6W8 199 aa12.91□□□□□ -0.34
PCDHA13-202ENST00000409494 GNRH2O43555 120 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 ADAMTSL5Q6ZMM2 481 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 A0A0U1RRA0 63 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 GAGE6Q13070 117 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 APRG1Q8IVJ8 170 aa12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 EIF4EBP1Q13541 118 aaPredicted RBP12.9□□□□□ -0.34
PCDHA13-202ENST00000409494 BRWD1-AS2P59051 145 aa12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 MRPL35Q9NZE8 188 aaKnown RBP12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 TRAV26-2A0A0B4J265 109 aa12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 E7EUB6 86 aa12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 CCL18P55774 89 aa12.89□□□□□ -0.35
PCDHA13-202ENST00000409494 A0A0J9YX75 114 aa12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 SIVA1O15304 175 aa12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 TMEM61Q8N0U2 210 aa12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 ANGP03950 147 aaKnown RBP12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 GTSF1LQ9H1H1 148 aa12.88□□□□□ -0.35
PCDHA13-202ENST00000409494 K7EP34 96 aa12.87□□□□□ -0.35
PCDHA13-202ENST00000409494 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 K7EP13 123 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 FRMD6-AS1P0C7T7 363 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms