RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 CGB7P0DN87 165 aa9.65□□□□□ -0.86
SHANK2-203ENST00000409161 BRD3OSQ6XYD6 125 aa9.65□□□□□ -0.86
SHANK2-203ENST00000409161 MYO9AB2RTY4 2548 aa9.65□□□□□ -0.86
SHANK2-203ENST00000409161 IGHV3-16A0A0C4DH30 117 aa9.65□□□□□ -0.86
SHANK2-203ENST00000409161 HIGD2BQ4VC39 106 aa9.65□□□□□ -0.86
SHANK2-203ENST00000409161 BAALCQ8WXS3 180 aa9.65□□□□□ -0.86
SHANK2-203ENST00000409161 EPOPA6NHQ4 379 aa9.65□□□□□ -0.87
SHANK2-203ENST00000409161 PRR31Q5SQ13 230 aa9.65□□□□□ -0.87
SHANK2-203ENST00000409161 CCDC168Q8NDH2 2452 aa9.64□□□□□ -0.87
SHANK2-203ENST00000409161 IGHV1-69P01742 117 aa9.64□□□□□ -0.87
SHANK2-203ENST00000409161 C3orf56Q8N813 242 aa9.64□□□□□ -0.87
SHANK2-203ENST00000409161 C2CD3Q4AC94 2353 aa9.64□□□□□ -0.87
SHANK2-203ENST00000409161 PTPRSQ13332 1948 aa9.64□□□□□ -0.87
SHANK2-203ENST00000409161 IGLL5B9A064 214 aa9.63□□□□□ -0.87
SHANK2-203ENST00000409161 IGLC1P0CG04 106 aa9.63□□□□□ -0.87
SHANK2-203ENST00000409161 ABCA2Q9BZC7 2435 aa9.63□□□□□ -0.87
SHANK2-203ENST00000409161 TEX36Q5VZQ5 186 aa9.63□□□□□ -0.87
SHANK2-203ENST00000409161 MRPL55Q7Z7F7 128 aaKnown RBP9.63□□□□□ -0.87
SHANK2-203ENST00000409161 C14orf132Q9NPU4 83 aa9.63□□□□□ -0.87
SHANK2-203ENST00000409161 CPAMD8Q8IZJ3 1885 aa9.63□□□□□ -0.87
SHANK2-203ENST00000409161 CLPSP04118 112 aa9.63□□□□□ -0.87
SHANK2-203ENST00000409161 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
SHANK2-203ENST00000409161 XCL1P47992 114 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 IGKV1-6A0A0C4DH72 117 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 ZNF726P1Q15940 193 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 HIVEP2P31629 2446 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 DKK4Q9UBT3 224 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 CFHR3Q02985 330 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 ATP5EP2Q5VTU8 51 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 IGF2BP2-AS1Q96M15 143 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 BPESC1Q9GZL8 116 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
SHANK2-203ENST00000409161 BUB3O43684 328 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 B3GALT5-AS1P59052 145 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 FOXI1Q12951 378 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 KLF2Q9Y5W3 355 aaPredicted RBP9.61□□□□□ -0.87
SHANK2-203ENST00000409161 PRB4P10163 310 aaPredicted RBP9.61□□□□□ -0.87
SHANK2-203ENST00000409161 COL4A5P29400 1685 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 LGALS9O00182 355 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 V9GYY9 64 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 G3V4G9 280 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 PCP2Q8IVA1 136 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 ELANEP08246 267 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 BRK1Q8WUW1 75 aa9.61□□□□□ -0.87
SHANK2-203ENST00000409161 LYPD2Q6UXB3 125 aa9.6□□□□□ -0.87
SHANK2-203ENST00000409161 COX7A2LO14548 114 aa9.6□□□□□ -0.87
SHANK2-203ENST00000409161 C17orf82Q86X59 251 aaPredicted RBP9.6□□□□□ -0.87
SHANK2-203ENST00000409161 MUC6Q6W4X9 2439 aa9.6□□□□□ -0.87
SHANK2-203ENST00000409161 C16orf74Q96GX8 76 aa9.6□□□□□ -0.87
SHANK2-203ENST00000409161 K7ERS5 55 aa9.6□□□□□ -0.87
SHANK2-203ENST00000409161 CD59P13987 128 aa9.6□□□□□ -0.87
SHANK2-203ENST00000409161 DUX4L9Q6RFH8 374 aaPredicted RBP9.6□□□□□ -0.87
SHANK2-203ENST00000409161 IGKV1-39P01597 117 aa9.6□□□□□ -0.87
SHANK2-203ENST00000409161 IGKV1D-39P04432 117 aa9.6□□□□□ -0.87
SHANK2-203ENST00000409161 WT1-ASQ06250 92 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 ZNF503Q96F45 646 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 TRAV12-2A0A075B6T6 113 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 K7EN84 100 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 CRYGBP07316 175 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 C17orf58Q2M2W7 97 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 TRAV4A0A0B4J268 109 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 IGHV3-38A0A0C4DH36 116 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 TRBV10-2A0A0K0K1G8 114 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 BDP1A6H8Y1 2624 aa9.59□□□□□ -0.87
SHANK2-203ENST00000409161 FOXE3Q13461 319 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 MLANAQ16655 118 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 ETV2O00321 342 aaPredicted RBP9.58□□□□□ -0.88
SHANK2-203ENST00000409161 PIFOQ8TCI5 191 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 ADAMTS20P59510 1910 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 K7EQD1 137 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 NDUFC1O43677 76 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 TIRAPP58753 221 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 RPL18AQ02543 176 aaKnown RBP9.58□□□□□ -0.88
SHANK2-203ENST00000409161 LINC00643Q86TS7 51 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 E7EQL1 145 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 COL8A2P25067 703 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 TMEM61Q8N0U2 210 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 KAAG1Q9UBP8 84 aa9.58□□□□□ -0.88
SHANK2-203ENST00000409161 UQCRQO14949 82 aa9.57□□□□□ -0.88
SHANK2-203ENST00000409161 A4D1N5 150 aa9.57□□□□□ -0.88
SHANK2-203ENST00000409161 C15orf65H3BRN8 121 aa9.57□□□□□ -0.88
SHANK2-203ENST00000409161 TRBV12-3P01733 135 aa9.57□□□□□ -0.88
SHANK2-203ENST00000409161 HIST2H2BCQ6DN03 193 aa9.57□□□□□ -0.88
SHANK2-203ENST00000409161 IGKV2D-24A0A075B6R9 120 aa9.57□□□□□ -0.88
SHANK2-203ENST00000409161 LINC00205P59089 165 aa9.57□□□□□ -0.88
SHANK2-203ENST00000409161 Q6ZS92 163 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 IGHV1-58A0A0C4DH39 117 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 IGKV3D-7A0A0C4DH55 119 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 FAM120AOSQ5T036 256 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 RAI1Q7Z5J4 1906 aaPredicted RBP9.56□□□□□ -0.88
SHANK2-203ENST00000409161 PRR20EP86478 221 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 PRR20CP86479 221 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 PRR20DP86480 221 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 PRR20BP86481 221 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 PRR20AP86496 221 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
SHANK2-203ENST00000409161 C11orf86A6NJI1 115 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms