RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 MSRB1Q9NZV6 116 aa12.46□□□□□ -0.41
COL4A3BP-204ENST00000405807 EFNA4P52798 201 aa12.46□□□□□ -0.42
COL4A3BP-204ENST00000405807 Q8TAT8 98 aa12.46□□□□□ -0.42
COL4A3BP-204ENST00000405807 RP1L1Q8IWN7 2480 aaPredicted RBP12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 TRBV7-7A0A0K0K1E9 115 aa12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 OVOL1O14753 267 aa12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 DPM2O94777 84 aa12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 CD3EP07766 207 aa12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 DEFB124Q8NES8 71 aa12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 POM121L12Q8N7R1 296 aa12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
COL4A3BP-204ENST00000405807 ZNF575Q86XF7 245 aa12.44□□□□□ -0.42
COL4A3BP-204ENST00000405807 FOXC2Q99958 501 aa12.44□□□□□ -0.42
COL4A3BP-204ENST00000405807 LINC00336Q6ZUF6 198 aa12.44□□□□□ -0.42
COL4A3BP-204ENST00000405807 IGLV11-55A0A075B6I3 123 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 E7EQL1 145 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 FANCD2OSQ96PS1 177 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 TEX49A0A1B0GTD5 131 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 A0A1W2PRX2 142 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 GAS8-AS1O95177 125 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 TMEM86BQ8N661 226 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 Q8N8P6 123 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 NPBQ8NG41 125 aa12.43□□□□□ -0.42
COL4A3BP-204ENST00000405807 NDUFA3O95167 84 aa12.42□□□□□ -0.42
COL4A3BP-204ENST00000405807 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
COL4A3BP-204ENST00000405807 F8W735 103 aaPredicted RBP12.42□□□□□ -0.42
COL4A3BP-204ENST00000405807 DSCR8Q96T75 97 aa12.42□□□□□ -0.42
COL4A3BP-204ENST00000405807 DPM3Q9P2X0 92 aa12.42□□□□□ -0.42
COL4A3BP-204ENST00000405807 PYGO1Q9Y3Y4 419 aa12.42□□□□□ -0.42
COL4A3BP-204ENST00000405807 PKDREJQ9NTG1 2253 aa12.41□□□□□ -0.42
COL4A3BP-204ENST00000405807 CRIP2P52943 208 aaPredicted RBP12.41□□□□□ -0.42
COL4A3BP-204ENST00000405807 IGFL4Q6B9Z1 124 aa12.41□□□□□ -0.42
COL4A3BP-204ENST00000405807 SMAD5-AS1Q9Y6J3 95 aa12.41□□□□□ -0.42
COL4A3BP-204ENST00000405807 DTX2Q86UW9 622 aa12.41□□□□□ -0.42
COL4A3BP-204ENST00000405807 MYOZ3Q8TDC0 251 aa12.41□□□□□ -0.42
COL4A3BP-204ENST00000405807 SIRPDQ9H106 197 aa12.41□□□□□ -0.42
COL4A3BP-204ENST00000405807 CRYGAP11844 174 aa12.4□□□□□ -0.42
COL4A3BP-204ENST00000405807 MGAQ8IWI9 3026 aa12.4□□□□□ -0.42
COL4A3BP-204ENST00000405807 ZGRF1Q86YA3 2104 aa12.4□□□□□ -0.42
COL4A3BP-204ENST00000405807 RELNP78509 3460 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 hADV29S1A0JD25 119 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 LYNX1G3V0Z9 82 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 TRACP01848 142 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 LYNX1P0DP58 116 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 GATA1P15976 413 aaPredicted RBP12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 UBE2D1P51668 147 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 EBI3Q14213 229 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 PSMG3-AS1Q96PY0 264 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 COX7CP15954 63 aa12.39□□□□□ -0.43
COL4A3BP-204ENST00000405807 IGLV2-18A0A075B6J9 118 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 LGALS9O00182 355 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 DEFB123Q8N688 67 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 FAM19A4Q96LR4 140 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 MRPL35Q9NZE8 188 aaKnown RBP12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 FAM236DA0A1B0GTK5 79 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 IGHV3-23P01764 117 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 FAM236CP0DP71 79 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 SVEP1Q4LDE5 3571 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 NCBP2LA6PVI3 153 aaKnown RBP12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 LINC01619G3V211 115 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 ERCC8Q13216 396 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 LAGE3Q14657 143 aa12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 ZNF256Q9Y2P7 627 aaPredicted RBP12.38□□□□□ -0.43
COL4A3BP-204ENST00000405807 CTSGP08311 255 aa12.37□□□□□ -0.43
COL4A3BP-204ENST00000405807 DYNAPQ8N1N2 210 aa12.37□□□□□ -0.43
COL4A3BP-204ENST00000405807 RPL13AP40429 203 aaKnown RBP12.36□□□□□ -0.43
COL4A3BP-204ENST00000405807 CYSTM1Q9H1C7 97 aa12.36□□□□□ -0.43
COL4A3BP-204ENST00000405807 EP300Q09472 2414 aaPredicted RBP12.36□□□□□ -0.43
COL4A3BP-204ENST00000405807 LGALS1P09382 135 aaKnown RBP12.36□□□□□ -0.43
COL4A3BP-204ENST00000405807 PLNP26678 52 aa12.36□□□□□ -0.43
COL4A3BP-204ENST00000405807 TMEM258P61165 79 aa12.36□□□□□ -0.43
COL4A3BP-204ENST00000405807 LY6G5BQ8NDX9 201 aa12.36□□□□□ -0.43
COL4A3BP-204ENST00000405807 ZZEF1O43149 2961 aa12.35□□□□□ -0.43
COL4A3BP-204ENST00000405807 RNF152Q8N8N0 203 aa12.35□□□□□ -0.43
COL4A3BP-204ENST00000405807 IMUPQ9GZP8 106 aa12.35□□□□□ -0.43
COL4A3BP-204ENST00000405807 PFN2P35080 140 aa12.34□□□□□ -0.43
COL4A3BP-204ENST00000405807 PRAC2D3DTV9 90 aa12.34□□□□□ -0.43
COL4A3BP-204ENST00000405807 K7ENP7 123 aa12.34□□□□□ -0.43
COL4A3BP-204ENST00000405807 IL17RELQ6ZVW7 336 aa12.34□□□□□ -0.43
COL4A3BP-204ENST00000405807 NDUFA11Q86Y39 141 aa12.34□□□□□ -0.43
COL4A3BP-204ENST00000405807 IGKV3D-20A0A0C4DH25 116 aa12.33□□□□□ -0.43
COL4A3BP-204ENST00000405807 CEP250Q9BV73 2442 aa12.33□□□□□ -0.43
COL4A3BP-204ENST00000405807 CUL9Q8IWT3 2517 aa12.33□□□□□ -0.44
COL4A3BP-204ENST00000405807 TRGV3P03979 118 aa12.33□□□□□ -0.44
COL4A3BP-204ENST00000405807 NRACQ8N912 160 aa12.33□□□□□ -0.44
COL4A3BP-204ENST00000405807 TTC28Q96AY4 2481 aa12.33□□□□□ -0.44
COL4A3BP-204ENST00000405807 H3BMM0 161 aa12.33□□□□□ -0.44
COL4A3BP-204ENST00000405807 NDPQ00604 133 aa12.33□□□□□ -0.44
COL4A3BP-204ENST00000405807 C1orf195Q5TG92 126 aa12.33□□□□□ -0.44
COL4A3BP-204ENST00000405807 UBE2WQ96B02 151 aa12.33□□□□□ -0.44
COL4A3BP-204ENST00000405807 J3QQQ9 107 aa12.32□□□□□ -0.44
COL4A3BP-204ENST00000405807 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
COL4A3BP-204ENST00000405807 SPANXDQ9BXN6 97 aa12.32□□□□□ -0.44
COL4A3BP-204ENST00000405807 IGHV3OR16-8A0A075B7F1 116 aa12.32□□□□□ -0.44
COL4A3BP-204ENST00000405807 TRAV13-1A0A0B4J241 112 aa12.32□□□□□ -0.44
COL4A3BP-204ENST00000405807 H7C1H1 209 aa12.32□□□□□ -0.44
COL4A3BP-204ENST00000405807 C2orf48Q96LS8 159 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms