RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 SNAI2O43623 268 aa12.24□□□□□ -0.45
CGREF1-206ENST00000405600 ZNF324O75467 553 aaPredicted RBP12.24□□□□□ -0.45
CGREF1-206ENST00000405600 INSP01308 110 aa12.24□□□□□ -0.45
CGREF1-206ENST00000405600 NDUFA6P56556 154 aa12.24□□□□□ -0.45
CGREF1-206ENST00000405600 TWIST1Q15672 202 aa12.24□□□□□ -0.45
CGREF1-206ENST00000405600 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
CGREF1-206ENST00000405600 MUC21Q5SSG8 566 aa12.24□□□□□ -0.45
CGREF1-206ENST00000405600 MUC7Q8TAX7 377 aa12.24□□□□□ -0.45
CGREF1-206ENST00000405600 SSBP4Q9BWG4 385 aaPredicted RBP12.24□□□□□ -0.45
CGREF1-206ENST00000405600 TRGV11A0A075B6L2 103 aa12.23□□□□□ -0.45
CGREF1-206ENST00000405600 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
CGREF1-206ENST00000405600 SPANXN1Q5VSR9 72 aa12.23□□□□□ -0.45
CGREF1-206ENST00000405600 TRPT1Q86TN4 253 aaKnown RBP12.23□□□□□ -0.45
CGREF1-206ENST00000405600 DEFB125Q8N687 156 aa12.23□□□□□ -0.45
CGREF1-206ENST00000405600 TM2D3Q9BRN9 247 aa12.23□□□□□ -0.45
CGREF1-206ENST00000405600 TRAV12-2A0A075B6T6 113 aa12.22□□□□□ -0.45
CGREF1-206ENST00000405600 NTF3P20783 257 aa12.22□□□□□ -0.45
CGREF1-206ENST00000405600 KIR3DS1Q14943 382 aa12.22□□□□□ -0.45
CGREF1-206ENST00000405600 MORN3Q6PF18 240 aaPredicted RBP12.22□□□□□ -0.45
CGREF1-206ENST00000405600 ZNF493Q6ZR52 646 aa12.22□□□□□ -0.45
CGREF1-206ENST00000405600 SPATA25Q9BR10 227 aa12.22□□□□□ -0.45
CGREF1-206ENST00000405600 WFDC10AQ9H1F0 79 aa12.22□□□□□ -0.45
CGREF1-206ENST00000405600 PHLDA3Q9Y5J5 127 aa12.22□□□□□ -0.45
CGREF1-206ENST00000405600 IGHV4-4A0A075B6R2 117 aa12.21□□□□□ -0.45
CGREF1-206ENST00000405600 H3BVH4 76 aa12.21□□□□□ -0.45
CGREF1-206ENST00000405600 ZNF124Q15973 351 aa12.21□□□□□ -0.45
CGREF1-206ENST00000405600 ZFAND6Q6FIF0 208 aa12.21□□□□□ -0.45
CGREF1-206ENST00000405600 TMEM256Q8N2U0 113 aa12.21□□□□□ -0.45
CGREF1-206ENST00000405600 C1QTNF4Q9BXJ3 329 aa12.21□□□□□ -0.45
CGREF1-206ENST00000405600 C5orf52A6NGY3 159 aa12.2□□□□□ -0.46
CGREF1-206ENST00000405600 FXYD7P58549 80 aa12.2□□□□□ -0.46
CGREF1-206ENST00000405600 LINC00467Q9BRT7 94 aa12.2□□□□□ -0.46
CGREF1-206ENST00000405600 TMEM191AQ9H0A3 160 aa12.2□□□□□ -0.46
CGREF1-206ENST00000405600 RETNQ9HD89 108 aa12.2□□□□□ -0.46
CGREF1-206ENST00000405600 HUWE1Q7Z6Z7 4374 aaKnown RBP12.19□□□□□ -0.46
CGREF1-206ENST00000405600 RBMY1BA6NDE4 496 aaKnown RBP12.19□□□□□ -0.46
CGREF1-206ENST00000405600 RBMY1EA6NEQ0 496 aaKnown RBP12.19□□□□□ -0.46
CGREF1-206ENST00000405600 RBMY1DP0C7P1 496 aaKnown RBP12.19□□□□□ -0.46
CGREF1-206ENST00000405600 SNRPEP62304 92 aaKnown RBP12.19□□□□□ -0.46
CGREF1-206ENST00000405600 SLAQ13239 276 aa12.19□□□□□ -0.46
CGREF1-206ENST00000405600 OR10J3Q5JRS4 329 aa12.19□□□□□ -0.46
CGREF1-206ENST00000405600 CASC10Q5T4H9 136 aa12.19□□□□□ -0.46
CGREF1-206ENST00000405600 Q6ZQT7 251 aa12.19□□□□□ -0.46
CGREF1-206ENST00000405600 ZNF575Q86XF7 245 aa12.19□□□□□ -0.46
CGREF1-206ENST00000405600 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
CGREF1-206ENST00000405600 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
CGREF1-206ENST00000405600 KMT2CQ8NEZ4 4911 aaKnown RBP12.18□□□□□ -0.46
CGREF1-206ENST00000405600 LOC102724200A0A096LPH7 203 aaPredicted RBP12.18□□□□□ -0.46
CGREF1-206ENST00000405600 CBY3A6NI87 242 aa12.18□□□□□ -0.46
CGREF1-206ENST00000405600 GNRH2O43555 120 aa12.18□□□□□ -0.46
CGREF1-206ENST00000405600 Q0VG73 95 aa12.18□□□□□ -0.46
CGREF1-206ENST00000405600 COA6Q5JTJ3 125 aaKnown RBP12.18□□□□□ -0.46
CGREF1-206ENST00000405600 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
CGREF1-206ENST00000405600 SCRT2Q9NQ03 307 aa12.18□□□□□ -0.46
CGREF1-206ENST00000405600 TIMM8BQ9Y5J9 83 aaPredicted RBP12.18□□□□□ -0.46
CGREF1-206ENST00000405600 STAB2Q8WWQ8 2551 aa12.18□□□□□ -0.46
CGREF1-206ENST00000405600 LOC105371267A0A1B0GV96 52 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 CRXO43186 299 aaPredicted RBP12.17□□□□□ -0.46
CGREF1-206ENST00000405600 HOXA5P20719 270 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 SRIP30626 198 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 SSTP61278 116 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 KIAA1644Q3SXP7 199 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 FAM104BQ5XKR9 115 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 BAGE3Q86Y29 109 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 LINC01587Q99440 93 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 TMEM208Q9BTX3 173 aa12.17□□□□□ -0.46
CGREF1-206ENST00000405600 IGHV3-16A0A0C4DH30 117 aa12.16□□□□□ -0.46
CGREF1-206ENST00000405600 MUC21A0A0G2JKD1 596 aa12.16□□□□□ -0.46
CGREF1-206ENST00000405600 MUC21A0A140T8X8 626 aa12.16□□□□□ -0.46
CGREF1-206ENST00000405600 UBE2CO00762 179 aa12.16□□□□□ -0.46
CGREF1-206ENST00000405600 S100A2P29034 98 aa12.16□□□□□ -0.46
CGREF1-206ENST00000405600 APOC4P55056 127 aa12.16□□□□□ -0.46
CGREF1-206ENST00000405600 GOLT1BQ9Y3E0 138 aa12.16□□□□□ -0.46
CGREF1-206ENST00000405600 PPBPP02775 128 aa12.15□□□□□ -0.46
CGREF1-206ENST00000405600 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
CGREF1-206ENST00000405600 ZNF415Q09FC8 603 aa12.15□□□□□ -0.46
CGREF1-206ENST00000405600 ALKBH7Q9BT30 221 aaPredicted RBP12.15□□□□□ -0.46
CGREF1-206ENST00000405600 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
CGREF1-206ENST00000405600 M0R381 172 aa12.14□□□□□ -0.47
CGREF1-206ENST00000405600 DMRTA1Q5VZB9 504 aa12.14□□□□□ -0.47
CGREF1-206ENST00000405600 C9orf85Q96MD7 179 aa12.14□□□□□ -0.47
CGREF1-206ENST00000405600 AP1S3Q96PC3 154 aa12.14□□□□□ -0.47
CGREF1-206ENST00000405600 KIR2DL5BA0A0G2JN68 375 aa12.13□□□□□ -0.47
CGREF1-206ENST00000405600 KIR2DL5BA0A0G2JPC4 375 aa12.13□□□□□ -0.47
CGREF1-206ENST00000405600 NXPH4O95158 308 aa12.13□□□□□ -0.47
CGREF1-206ENST00000405600 SMIM17P0DL12 118 aa12.13□□□□□ -0.47
CGREF1-206ENST00000405600 KIR2DL5AQ8N109 375 aa12.13□□□□□ -0.47
CGREF1-206ENST00000405600 ORMDL3Q8N138 153 aa12.13□□□□□ -0.47
CGREF1-206ENST00000405600 KIR2DL5BQ8NHK3 375 aa12.13□□□□□ -0.47
CGREF1-206ENST00000405600 RPL35AP18077 110 aaKnown RBP12.12□□□□□ -0.47
CGREF1-206ENST00000405600 CKS2P33552 79 aa12.12□□□□□ -0.47
CGREF1-206ENST00000405600 AMN1Q8IY45 258 aa12.12□□□□□ -0.47
CGREF1-206ENST00000405600 SPXQ9BT56 116 aa12.12□□□□□ -0.47
CGREF1-206ENST00000405600 DPH3P1Q9H4G8 78 aa12.12□□□□□ -0.47
CGREF1-206ENST00000405600 EDA2RQ9HAV5 297 aa12.12□□□□□ -0.47
CGREF1-206ENST00000405600 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
CGREF1-206ENST00000405600 LAMTOR2Q9Y2Q5 125 aa12.12□□□□□ -0.47
CGREF1-206ENST00000405600 MUC4Q99102 2169 aa12.12□□□□□ -0.47
CGREF1-206ENST00000405600 RBMY1A1P0DJD3 496 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms