RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 IGHV1-69DA0A0B4J2H0 117 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 IGLV1-47P01700 117 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 RUSC1-AS1Q66K80 236 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 LY6G5BQ8NDX9 201 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 FAM110DQ8TAY7 271 aaPredicted RBP5.72□□□□□ -1.49
HDAC9-202ENST00000405010 TOMM6Q96B49 74 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 TRAV41A0A0B4J266 112 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 M0R1W7 72 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 TMEM219Q86XT9 240 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 CHD7Q9P2D1 2997 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 GATD1Q8NB37 220 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 OR13C6PQ8NH95 151 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 SPRY4Q9C004 299 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 NDUFA12Q9UI09 145 aa5.72□□□□□ -1.49
HDAC9-202ENST00000405010 TRBV7-9A0A0J9YWB2 115 aa5.71□□□□□ -1.49
HDAC9-202ENST00000405010 MUSTN1Q8IVN3 82 aa5.71□□□□□ -1.49
HDAC9-202ENST00000405010 TRBV7-3A0A075B6L6 115 aa5.71□□□□□ -1.5
HDAC9-202ENST00000405010 IGHV3-73A0A0B4J1V6 119 aa5.71□□□□□ -1.5
HDAC9-202ENST00000405010 GNRH2O43555 120 aa5.71□□□□□ -1.5
HDAC9-202ENST00000405010 BUB3O43684 328 aa5.71□□□□□ -1.5
HDAC9-202ENST00000405010 LAMA2P24043 3122 aaKnown RBP5.71□□□□□ -1.5
HDAC9-202ENST00000405010 CEP192Q8TEP8 1941 aa5.71□□□□□ -1.5
HDAC9-202ENST00000405010 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.5
HDAC9-202ENST00000405010 Q6ZS92 163 aa5.71□□□□□ -1.5
HDAC9-202ENST00000405010 WNK1Q9H4A3 2382 aa5.71□□□□□ -1.5
HDAC9-202ENST00000405010 SRSF2Q01130 221 aaKnown RBP5.7□□□□□ -1.5
HDAC9-202ENST00000405010 GAGE2AQ6NT46 116 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 Q8N1Y9 231 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 FANCD2OSQ96PS1 177 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 COL4A2P08572 1712 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 IGKV3OR2-268A0A0C4DH90 116 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 FSTL3O95633 263 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 RNASE1P07998 156 aaKnown RBP5.7□□□□□ -1.5
HDAC9-202ENST00000405010 CFAP161Q6P656 301 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 SEM1Q6ZVN7 128 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 ZNF625Q96I27 306 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-202ENST00000405010 TOMM7Q9P0U1 55 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 A0A1W2PNU3 283 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-202ENST00000405010 MORN3Q6PF18 240 aaPredicted RBP5.7□□□□□ -1.5
HDAC9-202ENST00000405010 DUX3Q96PT4 197 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 RHPN1-AS1Q9BWJ2 59 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 LENEPQ9Y5L5 61 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 CSPG4Q6UVK1 2322 aa5.7□□□□□ -1.5
HDAC9-202ENST00000405010 IGHV3OR16-12A0A075B7B8 117 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 IGHG4P01861 327 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 MRPL53Q96EL3 112 aaKnown RBP5.69□□□□□ -1.5
HDAC9-202ENST00000405010 MKI67P46013 3256 aaKnown RBP5.69□□□□□ -1.5
HDAC9-202ENST00000405010 F6UB75 175 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 NEXN-AS1Q8NBZ9 246 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 A0A0J9YXV3 536 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 A0A0J9YY99 117 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 TRBV10-2A0A0K0K1G8 114 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 UBE2L6O14933 153 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 LEPROTO15243 131 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 THBDP07204 575 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 COLQQ9Y215 455 aaPredicted RBP5.69□□□□□ -1.5
HDAC9-202ENST00000405010 PIEZO2Q9H5I5 2752 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 FAM236AA0A1B0GUQ0 79 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 FAM236BA0A1B0GV22 79 aa5.69□□□□□ -1.5
HDAC9-202ENST00000405010 TRGV11A0A075B6L2 103 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 ZMAT4Q9H898 229 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 TEX49A0A1B0GTD5 131 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 I3L3M4 83 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 CRYGBP07316 175 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 SAA4P35542 130 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 MOB4Q9Y3A3 225 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 PTPRBP23467 1997 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 SLC25A29Q8N8R3 303 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 NPBQ8NG41 125 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 DYNLRB2Q8TF09 96 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 PHLDA1Q8WV24 401 aaPredicted RBP5.68□□□□□ -1.5
HDAC9-202ENST00000405010 DUX5Q96PT3 197 aa5.68□□□□□ -1.5
HDAC9-202ENST00000405010 LINC01619G3V211 115 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 OVOL3O00110 214 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 INAFM2P0DMQ5 153 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 HOXB4P17483 251 aaPredicted RBP5.67□□□□□ -1.5
HDAC9-202ENST00000405010 C9orf47Q6ZRZ4 202 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 PRIMA1Q86XR5 153 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 NRACQ8N912 160 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 RASL10AQ92737 203 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 ICOSQ9Y6W8 199 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 ADAMTS20P59510 1910 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 BDP1A6H8Y1 2624 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 IGHV7-81A0A0B4J1V7 117 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 TRAV4A0A0B4J268 109 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 RNASE13Q5GAN3 156 aaKnown RBP5.67□□□□□ -1.5
HDAC9-202ENST00000405010 SUMO4Q6EEV6 95 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 TIMM17AQ99595 171 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 TMEM126AQ9H061 195 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 FAM223BA6NKX1 122 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 HIST1H4AP62805 103 aaKnown RBP5.67□□□□□ -1.5
HDAC9-202ENST00000405010 FAM223AQ8IWN6 122 aa5.67□□□□□ -1.5
HDAC9-202ENST00000405010 H3BT86 120 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 CRPP02741 224 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 RHOHQ15669 191 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 KNCNA6PVL3 124 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 CCDC179H3BU77 68 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 DEFB1P60022 68 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 NFE4Q86UQ8 179 aa5.66□□□□□ -1.5
HDAC9-202ENST00000405010 SPANXDQ9BXN6 97 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms