RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 FAM74A4Q5TZK3 123 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 BAALCQ8WXS3 180 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 RASL10AQ92737 203 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 OPRPNQ99935 248 aaPredicted RBP7.3□□□□□ -1.24
SMC1B-202ENST00000404354 SPATA25Q9BR10 227 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 C1orf122Q6ZSJ8 110 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 PIP4P1Q86T03 277 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 C20orf173Q96LM9 149 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 ZFP36P26651 326 aaKnown RBP7.29□□□□□ -1.24
SMC1B-202ENST00000404354 Q8NA96 180 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 NPBQ8NG41 125 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 DLX4Q92988 240 aaPredicted RBP7.29□□□□□ -1.24
SMC1B-202ENST00000404354 RNF5Q99942 180 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 CLPSL1A2RUU4 121 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 PIFOQ8TCI5 191 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 CCDC140Q96MF4 163 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 CDIP1Q9H305 208 aa7.29□□□□□ -1.24
SMC1B-202ENST00000404354 C11orf86A6NJI1 115 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 TCL1BO95988 128 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 TRBV12-3P01733 135 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 ZFAND3Q9H8U3 227 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 ZNF256Q9Y2P7 627 aaPredicted RBP7.28□□□□□ -1.24
SMC1B-202ENST00000404354 RNF183Q96D59 192 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 METTL26Q96S19 204 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 PRSS47A8MTI9 375 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 ADARB2-AS1A8MUL3 147 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 CCL21O00585 134 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 CFAP126Q5VTH2 177 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 TRPT1Q86TN4 253 aaKnown RBP7.28□□□□□ -1.24
SMC1B-202ENST00000404354 Q8N9W7 124 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 NEXN-AS1Q8NBZ9 246 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 CARD19Q96LW7 228 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 PSMG3-AS1Q96PY0 264 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 C1QTNF4Q9BXJ3 329 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 UBTD1Q9HAC8 227 aa7.28□□□□□ -1.24
SMC1B-202ENST00000404354 SCGB2A1O75556 95 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 CRIP2P52943 208 aaPredicted RBP7.27□□□□□ -1.25
SMC1B-202ENST00000404354 TIMD4Q96H15 378 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 SS18L2Q9UHA2 77 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 TP53TG1Q9Y2A0 90 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 HIVEP3Q5T1R4 2406 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 UNQ9165/PRO28630Q6UXU0 137 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 OR11H6Q8NGC7 330 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 MRAP2Q96G30 205 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 MUC4Q99102 2169 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 COX8CQ7Z4L0 72 aa7.27□□□□□ -1.25
SMC1B-202ENST00000404354 TSPEAR-AS2P59090 65 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 NPC2P61916 151 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 TRBV20-1A0A075B6N2 111 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 TAL2Q16559 108 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 Q6ZUT4 128 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 SPTBN4Q9H254 2564 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 USP9YO00507 2555 aaPredicted RBP7.26□□□□□ -1.25
SMC1B-202ENST00000404354 Q1RN00 199 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 ORMDL2Q53FV1 153 aa7.26□□□□□ -1.25
SMC1B-202ENST00000404354 TRAV2A0A0B4J234 112 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 C9JAW5 83 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 IGHV4-39P01824 125 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 HTN1P15515 57 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 EDN2P20800 178 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 TOMM6Q96B49 74 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 SLC50A1Q9BRV3 221 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 ZNF580Q9UK33 172 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 SETD2Q9BYW2 2564 aaPredicted RBP7.25□□□□□ -1.25
SMC1B-202ENST00000404354 LINC01546A6NGU7 62 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 ANKRD29Q8N6D5 301 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 LY6G5BQ8NDX9 201 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 CENPEQ02224 2701 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 CRYGDP07320 174 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 SCGB1A1P11684 91 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 SAA4P35542 130 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 ASIPP42127 132 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 LY6EQ16553 131 aa7.25□□□□□ -1.25
SMC1B-202ENST00000404354 TMEM238LA0A1B0GVL6 79 aa7.24□□□□□ -1.25
SMC1B-202ENST00000404354 A6NJY4 79 aa7.24□□□□□ -1.25
SMC1B-202ENST00000404354 BRD3OSQ6XYD6 125 aa7.24□□□□□ -1.25
SMC1B-202ENST00000404354 NDUFA11Q86Y39 141 aa7.24□□□□□ -1.25
SMC1B-202ENST00000404354 DPH3P1Q9H4G8 78 aa7.24□□□□□ -1.25
SMC1B-202ENST00000404354 TSHBP01222 138 aa7.24□□□□□ -1.25
SMC1B-202ENST00000404354 CFC1BP0CG36 223 aa7.24□□□□□ -1.25
SMC1B-202ENST00000404354 CFC1P0CG37 223 aa7.24□□□□□ -1.25
SMC1B-202ENST00000404354 ODF3BA8MYP8 253 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 B5MCH6 92 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 RNASE13Q5GAN3 156 aaKnown RBP7.23□□□□□ -1.25
SMC1B-202ENST00000404354 OR10J6PQ8NGY7 276 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 ANAPC13Q9BS18 74 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 A0A0J9YY99 117 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 A8MWV9 139 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 PRSS2P07478 247 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 CD7P09564 240 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 PSMG4Q5JS54 123 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 ZFAND2AQ8N6M9 145 aa7.23□□□□□ -1.25
SMC1B-202ENST00000404354 TRAV12-2A0A075B6T6 113 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 TRAV12-3A0A0B4J271 114 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 A4D1N5 150 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 EEF1AKMT3Q96AZ1 226 aa7.22□□□□□ -1.25
SMC1B-202ENST00000404354 ZNF48Q96MX3 618 aaPredicted RBP7.22□□□□□ -1.25
SMC1B-202ENST00000404354 TRAV12-1A0A0B4J245 112 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms