RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
SKA3-203ENST00000400018 SMAGPQ0VAQ4 97 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 OR8A1Q8NGG7 326 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 GPR82Q96P67 336 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 PRR25Q96S07 402 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 TRAV26-1A0A087WT03 109 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 SERTM2A0A1B0GWG4 89 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 RPL35AP18077 110 aaKnown RBP8.67□□□□□ -1.02
SKA3-203ENST00000400018 RNASE4P34096 147 aaKnown RBP8.67□□□□□ -1.02
SKA3-203ENST00000400018 SLC50A1Q9BRV3 221 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 GTSF1LQ9H1H1 148 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 MAP6D1Q9H9H5 199 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 CRYBA4P53673 196 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 IBA57Q5T440 356 aaKnown RBP8.67□□□□□ -1.02
SKA3-203ENST00000400018 DEFB125Q8N687 156 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 MLST8Q9BVC4 326 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 NACAE9PAV3 2078 aa8.67□□□□□ -1.02
SKA3-203ENST00000400018 AZU1P20160 251 aa8.66□□□□□ -1.02
SKA3-203ENST00000400018 NTF3P20783 257 aa8.66□□□□□ -1.02
SKA3-203ENST00000400018 KLF12Q9Y4X4 402 aa8.66□□□□□ -1.02
SKA3-203ENST00000400018 TENM3Q9P273 2699 aa8.66□□□□□ -1.02
SKA3-203ENST00000400018 IGHV3OR16-12A0A075B7B8 117 aa8.66□□□□□ -1.02
SKA3-203ENST00000400018 TRAV12-3A0A0B4J271 114 aa8.66□□□□□ -1.02
SKA3-203ENST00000400018 TMEM78Q5T7P6 136 aa8.66□□□□□ -1.02
SKA3-203ENST00000400018 Q0VG73 95 aa8.65□□□□□ -1.02
SKA3-203ENST00000400018 LYPD1Q8N2G4 141 aa8.65□□□□□ -1.02
SKA3-203ENST00000400018 FMC1Q96HJ9 113 aa8.65□□□□□ -1.02
SKA3-203ENST00000400018 V9GYV3 84 aa8.65□□□□□ -1.02
SKA3-203ENST00000400018 SNURFLB1AK76 121 aa8.65□□□□□ -1.03
SKA3-203ENST00000400018 IGLV1-51P01701 117 aa8.65□□□□□ -1.03
SKA3-203ENST00000400018 RBMY1A1P0DJD3 496 aaKnown RBP8.65□□□□□ -1.03
SKA3-203ENST00000400018 RBMY1CP0DJD4 496 aa8.65□□□□□ -1.03
SKA3-203ENST00000400018 RBMY1FQ15415 496 aaKnown RBP8.65□□□□□ -1.03
SKA3-203ENST00000400018 BVES-AS1Q5T3Y7 98 aa8.65□□□□□ -1.03
SKA3-203ENST00000400018 OR10G8Q8NGN5 311 aa8.65□□□□□ -1.03
SKA3-203ENST00000400018 SH2D1AO60880 128 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 SNRPD3P62318 126 aaKnown RBP8.64□□□□□ -1.03
SKA3-203ENST00000400018 ZNF575Q86XF7 245 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 OR10J6PQ8NGY7 276 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 ZNF492Q9P255 531 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 GAGE10A6NGK3 116 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 ORM1P02763 201 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
SKA3-203ENST00000400018 MRPL54Q6P161 138 aaKnown RBP8.64□□□□□ -1.03
SKA3-203ENST00000400018 KCNS1Q96KK3 526 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 TXNDC17Q9BRA2 123 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 XCL2Q9UBD3 114 aa8.64□□□□□ -1.03
SKA3-203ENST00000400018 TRAV9-2A0A087WT02 112 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 A0A0J9YX75 114 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 C9JCJ5 164 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 ZNF324O75467 553 aaPredicted RBP8.63□□□□□ -1.03
SKA3-203ENST00000400018 ZNF138P52744 262 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 ZFAND2AQ8N6M9 145 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 BORCS7Q96B45 105 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 K7EQM0 130 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 GNRH2O43555 120 aa8.63□□□□□ -1.03
SKA3-203ENST00000400018 ID1P41134 155 aa8.62□□□□□ -1.03
SKA3-203ENST00000400018 PGLYRP4Q96LB8 373 aa8.62□□□□□ -1.03
SKA3-203ENST00000400018 TMEM158Q8WZ71 300 aa8.62□□□□□ -1.03
SKA3-203ENST00000400018 KRTAP10-11P60412 298 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 SLAQ13239 276 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 PMCHL1Q16048 86 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 MSRB1Q9NZV6 116 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 IGKV3D-20A0A0C4DH25 116 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 P01737 135 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 CKS1BP61024 79 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 ZNF747Q9BV97 191 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 SSBP4Q9BWG4 385 aaPredicted RBP8.61□□□□□ -1.03
SKA3-203ENST00000400018 NAT8BQ9UHF3 227 aa8.61□□□□□ -1.03
SKA3-203ENST00000400018 FAM231BA6NCW3 169 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 H3BMM0 161 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 EBLN2Q6P2I7 272 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 C9orf47Q6ZRZ4 202 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 DAZAP1Q96EP5 407 aaKnown RBP8.6□□□□□ -1.03
SKA3-203ENST00000400018 NAA38Q9BRA0 125 aaKnown RBP8.6□□□□□ -1.03
SKA3-203ENST00000400018 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 C19orf71A6NCJ1 209 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 OR11H12B2RN74 326 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 CAMPP49913 170 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 TSKUQ8WUA8 353 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 HIGD1CA8MV81 97 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 NPIPB6E9PJ23 425 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 DEFB104AQ8WTQ1 72 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 SIGMAR1Q99720 223 aa8.6□□□□□ -1.03
SKA3-203ENST00000400018 SPAG8Q99932 426 aaPredicted RBP8.6□□□□□ -1.03
SKA3-203ENST00000400018 MUC4Q99102 2169 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 C7orf71A4D174 169 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 OR4C46A6NHA9 309 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 SRIP30626 198 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 UFSP1Q6NVU6 142 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 AMTNQ6UX39 209 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 SPATA12Q7Z6I5 190 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 CRXO43186 299 aaPredicted RBP8.59□□□□□ -1.03
SKA3-203ENST00000400018 ANXA2RQ3ZCQ2 193 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 NEGR1Q7Z3B1 354 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 NUP35Q8NFH5 326 aa8.59□□□□□ -1.03
SKA3-203ENST00000400018 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
SKA3-203ENST00000400018 FAM162BQ5T6X4 162 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms