RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 A0A087WX48 190 aa11.49□□□□□ -0.57
UFD1-202ENST00000399523 CIRBPQ14011 172 aaKnown RBP11.49□□□□□ -0.57
UFD1-202ENST00000399523 ARL6IP6Q8N6S5 226 aa11.49□□□□□ -0.57
UFD1-202ENST00000399523 OR2T35Q8NGX2 323 aa11.49□□□□□ -0.57
UFD1-202ENST00000399523 THAP6Q8TBB0 222 aa11.49□□□□□ -0.57
UFD1-202ENST00000399523 ZC2HC1AQ96GY0 325 aa11.49□□□□□ -0.57
UFD1-202ENST00000399523 NMES1Q9C002 83 aa11.49□□□□□ -0.57
UFD1-202ENST00000399523 DPH3P1Q9H4G8 78 aa11.49□□□□□ -0.57
UFD1-202ENST00000399523 OTORQ9NRC9 128 aa11.49□□□□□ -0.57
UFD1-202ENST00000399523 FAM25EA8MYX2 175 aa11.48□□□□□ -0.57
UFD1-202ENST00000399523 RNASE3P12724 160 aaKnown RBP11.48□□□□□ -0.57
UFD1-202ENST00000399523 ENHOQ6UWT2 76 aa11.48□□□□□ -0.57
UFD1-202ENST00000399523 GOLT1AQ6ZVE7 132 aa11.48□□□□□ -0.57
UFD1-202ENST00000399523 PGPA6NDG6 321 aa11.47□□□□□ -0.57
UFD1-202ENST00000399523 A8MWV9 139 aa11.47□□□□□ -0.57
UFD1-202ENST00000399523 BTCP35070 178 aa11.47□□□□□ -0.57
UFD1-202ENST00000399523 PIK3CD-AS1Q5SR53 167 aa11.47□□□□□ -0.57
UFD1-202ENST00000399523 UFSP1Q6NVU6 142 aa11.47□□□□□ -0.57
UFD1-202ENST00000399523 C14orf178Q8N769 122 aaPredicted RBP11.47□□□□□ -0.57
UFD1-202ENST00000399523 CMTM2Q8TAZ6 248 aa11.47□□□□□ -0.57
UFD1-202ENST00000399523 H3BMQ9 156 aa11.46□□□□□ -0.57
UFD1-202ENST00000399523 TAAR5O14804 337 aa11.46□□□□□ -0.57
UFD1-202ENST00000399523 ZNF80P51504 273 aaPredicted RBP11.46□□□□□ -0.57
UFD1-202ENST00000399523 RPL19P84098 196 aaKnown RBP11.46□□□□□ -0.57
UFD1-202ENST00000399523 IL15RAQ13261 267 aa11.46□□□□□ -0.57
UFD1-202ENST00000399523 DMRTA1Q5VZB9 504 aa11.46□□□□□ -0.57
UFD1-202ENST00000399523 KRTAP9-2Q9BYQ4 174 aa11.46□□□□□ -0.57
UFD1-202ENST00000399523 KCNIP2Q9NS61 270 aa11.46□□□□□ -0.57
UFD1-202ENST00000399523 S100A10P60903 97 aa11.45□□□□□ -0.58
UFD1-202ENST00000399523 FAM74A1Q5RGS3 127 aa11.45□□□□□ -0.58
UFD1-202ENST00000399523 KCNIP4Q6PIL6 250 aa11.45□□□□□ -0.58
UFD1-202ENST00000399523 NHLH2Q02577 135 aa11.44□□□□□ -0.58
UFD1-202ENST00000399523 RAB32Q13637 225 aa11.44□□□□□ -0.58
UFD1-202ENST00000399523 CNPY1Q3B7I2 92 aa11.43□□□□□ -0.58
UFD1-202ENST00000399523 KHDC3LQ587J8 217 aa11.43□□□□□ -0.58
UFD1-202ENST00000399523 TMEM75Q8N9X5 138 aa11.43□□□□□ -0.58
UFD1-202ENST00000399523 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
UFD1-202ENST00000399523 OR5C1Q8NGR4 320 aa11.43□□□□□ -0.58
UFD1-202ENST00000399523 MBD2Q9UBB5 411 aa11.43□□□□□ -0.58
UFD1-202ENST00000399523 HLA-DQA1P01909 254 aa11.42□□□□□ -0.58
UFD1-202ENST00000399523 S100A5P33763 92 aa11.42□□□□□ -0.58
UFD1-202ENST00000399523 KRTAP10-8P60410 259 aa11.42□□□□□ -0.58
UFD1-202ENST00000399523 LGALSLQ3ZCW2 172 aaPredicted RBP11.42□□□□□ -0.58
UFD1-202ENST00000399523 RNF185Q96GF1 192 aa11.42□□□□□ -0.58
UFD1-202ENST00000399523 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
UFD1-202ENST00000399523 WDR61Q9GZS3 305 aaKnown RBP11.42□□□□□ -0.58
UFD1-202ENST00000399523 JPT2Q9H910 190 aa11.42□□□□□ -0.58
UFD1-202ENST00000399523 LPAP08519 4548 aa11.41□□□□□ -0.58
UFD1-202ENST00000399523 A0A0J9YXV3 536 aa11.41□□□□□ -0.58
UFD1-202ENST00000399523 GCGP01275 180 aa11.41□□□□□ -0.58
UFD1-202ENST00000399523 CRPP02741 224 aa11.41□□□□□ -0.58
UFD1-202ENST00000399523 TAS2R45P59539 299 aa11.41□□□□□ -0.58
UFD1-202ENST00000399523 OR2G3Q8NGZ4 309 aa11.41□□□□□ -0.58
UFD1-202ENST00000399523 A0A087WYN8 130 aa11.4□□□□□ -0.58
UFD1-202ENST00000399523 GNG5P63218 68 aa11.4□□□□□ -0.58
UFD1-202ENST00000399523 TRIQKQ629K1 86 aa11.4□□□□□ -0.58
UFD1-202ENST00000399523 C15orf54Q8N8G6 183 aa11.4□□□□□ -0.58
UFD1-202ENST00000399523 SGK494Q96LW2 274 aa11.4□□□□□ -0.58
UFD1-202ENST00000399523 OR5AC2Q9NZP5 309 aa11.4□□□□□ -0.58
UFD1-202ENST00000399523 CENPXA8MT69 81 aa11.39□□□□□ -0.59
UFD1-202ENST00000399523 TMEM262E9PQX1 116 aa11.39□□□□□ -0.59
UFD1-202ENST00000399523 C17orf112F2Z3M2 114 aa11.39□□□□□ -0.59
UFD1-202ENST00000399523 RHODO00212 210 aa11.39□□□□□ -0.59
UFD1-202ENST00000399523 NOL3O60936 208 aaKnown RBP11.39□□□□□ -0.59
UFD1-202ENST00000399523 MIAQ16674 131 aa11.39□□□□□ -0.59
UFD1-202ENST00000399523 PHOX2AO14813 284 aa11.38□□□□□ -0.59
UFD1-202ENST00000399523 CNBPP62633 177 aaKnown RBP11.38□□□□□ -0.59
UFD1-202ENST00000399523 KRTAP26-1Q6PEX3 210 aa11.38□□□□□ -0.59
UFD1-202ENST00000399523 CLRN3Q8NCR9 226 aa11.38□□□□□ -0.59
UFD1-202ENST00000399523 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
UFD1-202ENST00000399523 SERTM2A0A1B0GWG4 89 aa11.37□□□□□ -0.59
UFD1-202ENST00000399523 MPV17L2Q567V2 206 aa11.37□□□□□ -0.59
UFD1-202ENST00000399523 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
UFD1-202ENST00000399523 SPACA4Q8TDM5 124 aa11.37□□□□□ -0.59
UFD1-202ENST00000399523 IGKV3D-20A0A0C4DH25 116 aa11.36□□□□□ -0.59
UFD1-202ENST00000399523 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
UFD1-202ENST00000399523 ANGP03950 147 aaKnown RBP11.36□□□□□ -0.59
UFD1-202ENST00000399523 S100A4P26447 101 aaKnown RBP11.36□□□□□ -0.59
UFD1-202ENST00000399523 UBE2D3P61077 147 aa11.36□□□□□ -0.59
UFD1-202ENST00000399523 UBE2D2P62837 147 aa11.36□□□□□ -0.59
UFD1-202ENST00000399523 SMUG1Q53HV7 270 aa11.36□□□□□ -0.59
UFD1-202ENST00000399523 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
UFD1-202ENST00000399523 PLAC8Q9NZF1 115 aa11.36□□□□□ -0.59
UFD1-202ENST00000399523 KIF25-AS1Q9Y6Z4 181 aa11.36□□□□□ -0.59
UFD1-202ENST00000399523 TRBV6-8A0A0A6YYG3 113 aa11.35□□□□□ -0.59
UFD1-202ENST00000399523 TRBV10-1A0A0K0K1A3 114 aa11.35□□□□□ -0.59
UFD1-202ENST00000399523 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
UFD1-202ENST00000399523 PQLC2Q6ZP29 291 aa11.35□□□□□ -0.59
UFD1-202ENST00000399523 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
UFD1-202ENST00000399523 SDHCQ99643 169 aaPredicted RBP11.35□□□□□ -0.59
UFD1-202ENST00000399523 PRR34Q9NV39 138 aa11.35□□□□□ -0.59
UFD1-202ENST00000399523 IL36BQ9NZH7 164 aa11.35□□□□□ -0.59
UFD1-202ENST00000399523 PSG8Q9UQ74 426 aa11.35□□□□□ -0.59
UFD1-202ENST00000399523 IGHV3-64A0A075B6Q5 118 aa11.34□□□□□ -0.59
UFD1-202ENST00000399523 RPL36AP83881 106 aaKnown RBP11.34□□□□□ -0.59
UFD1-202ENST00000399523 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
UFD1-202ENST00000399523 RPL36ALQ969Q0 106 aaKnown RBP11.34□□□□□ -0.59
UFD1-202ENST00000399523 MUC2Q02817 5179 aa11.33□□□□□ -0.6
UFD1-202ENST00000399523 TRBV7-3A0A075B6L6 115 aa11.33□□□□□ -0.6
UFD1-202ENST00000399523 TCRAP04437 139 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms