RNA–Protein interactions for RNA: ENST00000398795.6

TNFSF11-203, Transcript of TNF superfamily member 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF11, Length 2,199 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-203ENST00000398795 IGHV3-11P01762 117 aa14.8□□□□□ -0.04
TNFSF11-203ENST00000398795 RIPPLY3P57055 190 aa14.8□□□□□ -0.04
TNFSF11-203ENST00000398795 DAZ1Q9NQZ3 744 aaKnown RBP14.8□□□□□ -0.04
TNFSF11-203ENST00000398795 PRSS29PA6NIE9 313 aa14.8□□□□□ -0.04
TNFSF11-203ENST00000398795 KLLNB2CW77 178 aa14.8□□□□□ -0.04
TNFSF11-203ENST00000398795 SAMD13Q5VXD3 122 aa14.8□□□□□ -0.04
TNFSF11-203ENST00000398795 KIF25-AS1Q9Y6Z4 181 aa14.8□□□□□ -0.04
TNFSF11-203ENST00000398795 IGHV4-61A0A0C4DH41 118 aa14.79□□□□□ -0.04
TNFSF11-203ENST00000398795 PF4V1P10720 104 aa14.79□□□□□ -0.04
TNFSF11-203ENST00000398795 IGLV1-40P01703 118 aa14.78□□□□□ -0.04
TNFSF11-203ENST00000398795 LINC00315P59091 139 aa14.78□□□□□ -0.04
TNFSF11-203ENST00000398795 LY6EQ16553 131 aa14.78□□□□□ -0.04
TNFSF11-203ENST00000398795 LGALS1P09382 135 aaKnown RBP14.78□□□□□ -0.04
TNFSF11-203ENST00000398795 RRN3P1Q2M238 152 aa14.78□□□□□ -0.04
TNFSF11-203ENST00000398795 H3BUX3 64 aa14.77□□□□□ -0.04
TNFSF11-203ENST00000398795 K7EMT4 169 aa14.77□□□□□ -0.04
TNFSF11-203ENST00000398795 IGHV4-38-2P0DP08 117 aa14.77□□□□□ -0.04
TNFSF11-203ENST00000398795 PRADC1Q9BSG0 188 aa14.77□□□□□ -0.04
TNFSF11-203ENST00000398795 CYSLTR1Q9Y271 337 aa14.77□□□□□ -0.04
TNFSF11-203ENST00000398795 RPL24P83731 157 aaKnown RBP14.77□□□□□ -0.05
TNFSF11-203ENST00000398795 TEX48A0A1B0GUV7 120 aa14.76□□□□□ -0.05
TNFSF11-203ENST00000398795 LY6DQ14210 128 aa14.76□□□□□ -0.05
TNFSF11-203ENST00000398795 NDUFS8O00217 210 aa14.75□□□□□ -0.05
TNFSF11-203ENST00000398795 ID1P41134 155 aa14.75□□□□□ -0.05
TNFSF11-203ENST00000398795 PAPPA-AS1Q5QFB9 102 aa14.75□□□□□ -0.05
TNFSF11-203ENST00000398795 C10orf105Q8TEF2 133 aa14.75□□□□□ -0.05
TNFSF11-203ENST00000398795 MED13LQ71F56 2210 aa14.75□□□□□ -0.05
TNFSF11-203ENST00000398795 CFHR3Q02985 330 aa14.75□□□□□ -0.05
TNFSF11-203ENST00000398795 FAM159AQ6UWV7 190 aa14.75□□□□□ -0.05
TNFSF11-203ENST00000398795 IGKV3-7A0A075B6H7 116 aa14.74□□□□□ -0.05
TNFSF11-203ENST00000398795 COX6B1P14854 86 aa14.74□□□□□ -0.05
TNFSF11-203ENST00000398795 BLCAPP62952 87 aa14.74□□□□□ -0.05
TNFSF11-203ENST00000398795 ZNF580Q9UK33 172 aa14.74□□□□□ -0.05
TNFSF11-203ENST00000398795 CRYGDP07320 174 aa14.74□□□□□ -0.05
TNFSF11-203ENST00000398795 POLR2KP53803 58 aaKnown RBP14.74□□□□□ -0.05
TNFSF11-203ENST00000398795 ZNF815PA8K554 130 aa14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 DUSP14O95147 198 aaKnown RBP14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 SCGB2A2Q13296 93 aa14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 SPANXB1Q9NS25 103 aaPredicted RBP14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 TMEM238LA0A1B0GVL6 79 aa14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 IGIPA6NJ69 53 aa14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 A6NJY4 79 aa14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 VCYO14598 125 aa14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 DCANP1Q8TF63 244 aa14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 TMEM141Q96I45 108 aa14.73□□□□□ -0.05
TNFSF11-203ENST00000398795 ZFP2Q6ZN57 461 aa14.72□□□□□ -0.05
TNFSF11-203ENST00000398795 HOXA3O43365 443 aaPredicted RBP14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 TSHBP01222 138 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 SUMO4Q6EEV6 95 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 Q6ZS46 218 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 ODF3Q96PU9 254 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 TIMM17AQ99595 171 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 KIR2DL4Q99706 377 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 TP53TG1Q9Y2A0 90 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 NBASA2RRP1 2371 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 IGLV4-69A0A075B6H9 119 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 H3BMG7 143 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 HERVK_113P61574 105 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 PMVKQ15126 192 aa14.71□□□□□ -0.05
TNFSF11-203ENST00000398795 CACNA1BQ00975 2339 aa14.71□□□□□ -0.06
TNFSF11-203ENST00000398795 TRBV6-5A0A0K0K1A5 114 aa14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 J3QR89 54 aa14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 GNLYP22749 145 aa14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 WFDC2Q14508 124 aa14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 MORN3Q6PF18 240 aaPredicted RBP14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 CLEC2AQ6UVW9 174 aa14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 LCNL1Q6ZST4 164 aa14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 CCL19Q99731 98 aa14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 SCGB1D4Q6XE38 83 aa14.7□□□□□ -0.06
TNFSF11-203ENST00000398795 IGF2RP11717 2491 aa14.69□□□□□ -0.06
TNFSF11-203ENST00000398795 C11orf86A6NJI1 115 aa14.69□□□□□ -0.06
TNFSF11-203ENST00000398795 LGALS9O00182 355 aa14.69□□□□□ -0.06
TNFSF11-203ENST00000398795 MSMBP08118 114 aa14.69□□□□□ -0.06
TNFSF11-203ENST00000398795 GAGE13Q4V321 117 aa14.69□□□□□ -0.06
TNFSF11-203ENST00000398795 PRO0461Q9UI25 63 aa14.69□□□□□ -0.06
TNFSF11-203ENST00000398795 CD7P09564 240 aa14.68□□□□□ -0.06
TNFSF11-203ENST00000398795 SRD5A1P18405 259 aa14.68□□□□□ -0.06
TNFSF11-203ENST00000398795 PRORYQ9H606 182 aa14.68□□□□□ -0.06
TNFSF11-203ENST00000398795 ATRXP46100 2492 aa14.68□□□□□ -0.06
TNFSF11-203ENST00000398795 TRBV27A0A0K0K1C4 114 aa14.68□□□□□ -0.06
TNFSF11-203ENST00000398795 UBE2D1P51668 147 aa14.68□□□□□ -0.06
TNFSF11-203ENST00000398795 C9orf85Q96MD7 179 aa14.68□□□□□ -0.06
TNFSF11-203ENST00000398795 AMTNQ6UX39 209 aa14.67□□□□□ -0.06
TNFSF11-203ENST00000398795 PLEKHB2Q96CS7 222 aa14.67□□□□□ -0.06
TNFSF11-203ENST00000398795 JPT2Q9H910 190 aa14.67□□□□□ -0.06
TNFSF11-203ENST00000398795 SDHAF1A6NFY7 115 aa14.67□□□□□ -0.06
TNFSF11-203ENST00000398795 TRAV12-3A0A0B4J271 114 aa14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 TMEM238C9JI98 176 aa14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 CD300EQ496F6 205 aaPredicted RBP14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 PGPEP1Q9NXJ5 209 aa14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 IGHV4-30-2A0A087WSY4 118 aa14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 A0A087WWL8 130 aa14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 EDN2P20800 178 aa14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 PSMB8P28062 276 aa14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 SRSF9Q13242 221 aaKnown RBP eCLIP14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 MRPL16Q9NX20 251 aaKnown RBP14.66□□□□□ -0.06
TNFSF11-203ENST00000398795 IGHV3-16A0A0C4DH30 117 aa14.65□□□□□ -0.06
TNFSF11-203ENST00000398795 F5H697 171 aa14.65□□□□□ -0.06
TNFSF11-203ENST00000398795 SYT8Q8NBV8 401 aa14.65□□□□□ -0.06
TNFSF11-203ENST00000398795 ZNF876PQ49A33 203 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms