RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 HOXB4P17483 251 aaPredicted RBP8.55□□□□□ -1.04
CSGALNACT1-202ENST00000397998 MRGPRG-AS1Q2M3A8 158 aa8.55□□□□□ -1.04
CSGALNACT1-202ENST00000397998 ATP5J2P56134 94 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 PRO3102Q9H379 93 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 SPANXB1Q9NS25 103 aaPredicted RBP8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 PRO1854Q9UHT4 67 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 ACACBO00763 2458 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 PTPRBP23467 1997 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 FAM208BQ5VWN6 2430 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 LGALS1P09382 135 aaKnown RBP8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 TRBV20-1A0A075B6N2 111 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 TRAV12-2A0A075B6T6 113 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 J3QQQ9 107 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 HHLA3Q9XRX5 114 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 AGRNO00468 2067 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 DSPP15924 2871 aaKnown RBP8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 IGF1P05019 195 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 RPL39P62891 51 aaKnown RBP8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 MEIG1Q5JSS6 88 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 BAALCQ8WXS3 180 aa8.54□□□□□ -1.04
CSGALNACT1-202ENST00000397998 LINC01548A6NM66 108 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 ADARB2-AS1A8MUL3 147 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 MRPS12O15235 138 aaKnown RBP8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 CIRBPQ14011 172 aaKnown RBP8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 PIMREGQ9BSJ6 248 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 C11orf21Q9P2W6 132 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 TRAV8-4A0A0B4J246 113 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 FAM223BA6NKX1 122 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 LY6LH3BQJ8 138 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 FOXI1Q12951 378 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 FAM223AQ8IWN6 122 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 ZNF48Q96MX3 618 aaPredicted RBP8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 C1QTNF4Q9BXJ3 329 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 KLK9Q9UKQ9 250 aa8.53□□□□□ -1.04
CSGALNACT1-202ENST00000397998 ZFP36P26651 326 aaKnown RBP8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TCF15Q12870 199 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 C16orf54Q6UWD8 224 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 Q6ZQT7 251 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 GATD1Q8NB37 220 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 DUX5Q96PT3 197 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 DUX3Q96PT4 197 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 WNK1Q9H4A3 2382 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 C11orf86A6NJI1 115 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TNFRSF13BO14836 293 aaPredicted RBP8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 SLC25A20O43772 301 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 Q8NA96 180 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 DAZ1Q9NQZ3 744 aaKnown RBP8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 MSRB2Q9Y3D2 182 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 CACNA1AO00555 2505 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 INSL3P51460 131 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 UCNP55089 124 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 SPINK13Q1W4C9 94 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 C2orf82Q6UX34 121 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 ZFP2Q6ZN57 461 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
CSGALNACT1-202ENST00000397998 ANKRD11Q6UB99 2663 aaPredicted RBP8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TRAV12-1A0A0B4J245 112 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 C9orf47Q6ZRZ4 202 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 DYNLRB2Q8TF09 96 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 RAI1Q7Z5J4 1906 aaPredicted RBP8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 CENPVL3A0A0U1RRI6 287 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 KNCNA6PVL3 124 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 MRPL53Q96EL3 112 aaKnown RBP8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 JPT2Q9H910 190 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 CUL9Q8IWT3 2517 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 CCDC140Q96MF4 163 aa8.51□□□□□ -1.05
CSGALNACT1-202ENST00000397998 IGKV3OR2-268A0A0C4DH90 116 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 M0R2P5 195 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 SRSF2Q01130 221 aaKnown RBP8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 ATXN8Q156A1 80 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 LY6G5BQ8NDX9 201 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 NTN5Q8WTR8 489 aaPredicted RBP8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 USMG5Q96IX5 58 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TIMM21Q9BVV7 248 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 PTPN13Q12923 2485 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 SPTBN5Q9NRC6 3674 aaKnown RBP8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TRAV26-1A0A087WT03 109 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 NDUFA4O00483 81 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 RNASE13Q5GAN3 156 aaKnown RBP8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 UNQ9165/PRO28630Q6UXU0 137 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 RASL10AQ92737 203 aa8.5□□□□□ -1.05
CSGALNACT1-202ENST00000397998 A4D1N5 150 aa8.49□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TSPAN13O95857 204 aa8.49□□□□□ -1.05
CSGALNACT1-202ENST00000397998 LY6DQ14210 128 aa8.49□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TEN1Q86WV5 123 aa8.49□□□□□ -1.05
CSGALNACT1-202ENST00000397998 K7ENP7 123 aa8.49□□□□□ -1.05
CSGALNACT1-202ENST00000397998 NRACQ8N912 160 aa8.49□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TRBV12-3P01733 135 aa8.48□□□□□ -1.05
CSGALNACT1-202ENST00000397998 TMEM95Q3KNT9 176 aa8.48□□□□□ -1.05
CSGALNACT1-202ENST00000397998 SUMO4Q6EEV6 95 aa8.48□□□□□ -1.05
CSGALNACT1-202ENST00000397998 ZFAND3Q9H8U3 227 aa8.48□□□□□ -1.05
CSGALNACT1-202ENST00000397998 ODF3BA8MYP8 253 aa8.48□□□□□ -1.05
CSGALNACT1-202ENST00000397998 PIP4P2Q8N4L2 257 aa8.48□□□□□ -1.05
CSGALNACT1-202ENST00000397998 C10orf126Q8N4M7 172 aa8.48□□□□□ -1.05
CSGALNACT1-202ENST00000397998 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms