RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 GATA1P15976 413 aaPredicted RBP8.81□□□□□ -1
TTC28-201ENST00000397906 ZNF843Q8N446 348 aa8.81□□□□□ -1
TTC28-201ENST00000397906 IGLV3-1P01715 115 aa8.81□□□□□ -1
TTC28-201ENST00000397906 IGHV4-28A0A0C4DH34 117 aa8.81□□□□□ -1
TTC28-201ENST00000397906 TRBV12-3P01733 135 aa8.81□□□□□ -1
TTC28-201ENST00000397906 ZNF106Q9H2Y7 1883 aaKnown RBP8.81□□□□□ -1
TTC28-201ENST00000397906 Q8N7P7 452 aa8.81□□□□□ -1
TTC28-201ENST00000397906 I3L2K1 104 aa8.81□□□□□ -1
TTC28-201ENST00000397906 A8MWP6 167 aa8.8□□□□□ -1
TTC28-201ENST00000397906 IGHG4P01861 327 aa8.8□□□□□ -1
TTC28-201ENST00000397906 IGLV11-55A0A075B6I3 123 aa8.8□□□□□ -1
TTC28-201ENST00000397906 CTSGP08311 255 aa8.8□□□□□ -1
TTC28-201ENST00000397906 PCNX2A6NKB5 2137 aa8.8□□□□□ -1
TTC28-201ENST00000397906 Q8N1Y9 231 aa8.8□□□□□ -1
TTC28-201ENST00000397906 J3QQQ9 107 aa8.8□□□□□ -1
TTC28-201ENST00000397906 K7EN84 100 aa8.8□□□□□ -1
TTC28-201ENST00000397906 TRAV4A0A0B4J268 109 aa8.8□□□□□ -1
TTC28-201ENST00000397906 ETDCA0A1B0GVM5 59 aa8.8□□□□□ -1
TTC28-201ENST00000397906 SLC25A29Q8N8R3 303 aa8.79□□□□□ -1
TTC28-201ENST00000397906 FANCD2OSQ96PS1 177 aa8.79□□□□□ -1
TTC28-201ENST00000397906 MUC6Q6W4X9 2439 aa8.79□□□□□ -1
TTC28-201ENST00000397906 K7EIM0 57 aa8.79□□□□□ -1
TTC28-201ENST00000397906 RBAKDNA6NC62 111 aa8.79□□□□□ -1
TTC28-201ENST00000397906 COX7A2LO14548 114 aa8.79□□□□□ -1
TTC28-201ENST00000397906 DKK2Q9UBU2 259 aa8.79□□□□□ -1
TTC28-201ENST00000397906 ABCA1O95477 2261 aa8.79□□□□□ -1
TTC28-201ENST00000397906 RNF138Q8WVD3 245 aa8.79□□□□□ -1
TTC28-201ENST00000397906 C20orf78Q9BR46 151 aa8.79□□□□□ -1
TTC28-201ENST00000397906 UBE2AP49459 152 aa8.78□□□□□ -1
TTC28-201ENST00000397906 SPTAN1Q13813 2472 aaKnown RBP8.78□□□□□ -1
TTC28-201ENST00000397906 MYCNOSP40205 109 aa8.78□□□□□ -1
TTC28-201ENST00000397906 MED13Q9UHV7 2174 aa8.78□□□□□ -1
TTC28-201ENST00000397906 C16orf54Q6UWD8 224 aa8.78□□□□□ -1
TTC28-201ENST00000397906 FAM110AQ9BQ89 295 aa8.78□□□□□ -1
TTC28-201ENST00000397906 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
TTC28-201ENST00000397906 NCR3O14931 201 aa8.78□□□□□ -1
TTC28-201ENST00000397906 Q8NFD4 153 aa8.78□□□□□ -1
TTC28-201ENST00000397906 K7ERJ3 54 aa8.78□□□□□ -1
TTC28-201ENST00000397906 RS1O15537 224 aa8.77□□□□□ -1
TTC28-201ENST00000397906 Q0VG73 95 aa8.77□□□□□ -1
TTC28-201ENST00000397906 PYY3Q5JQD4 70 aa8.77□□□□□ -1
TTC28-201ENST00000397906 KIAA1549LQ6ZVL6 1849 aa8.77□□□□□ -1
TTC28-201ENST00000397906 NACAE9PAV3 2078 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 LRCOL1A6NCL2 159 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 POU2AF1Q16633 256 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 RNF152Q8N8N0 203 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 PRR20EP86478 221 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 PRR20CP86479 221 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 PRR20DP86480 221 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 PRR20BP86481 221 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 PRR20AP86496 221 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 UBL5Q9BZL1 73 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 UNQ9165/PRO28630Q6UXU0 137 aa8.77□□□□□ -1.01
TTC28-201ENST00000397906 RNF183Q96D59 192 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 GTSF1LQ9H1H1 148 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 OBSL1O75147 1896 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 FAM231DQ6ZW35 169 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 CARD19Q96LW7 228 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 POLR3KQ9Y2Y1 108 aaPredicted RBP8.76□□□□□ -1.01
TTC28-201ENST00000397906 SIRPDQ9H106 197 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 F8VRH5 84 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 IGHV4-31P0DP07 118 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 PRAC2D3DTV9 90 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 ZNF664Q8N3J9 261 aa8.76□□□□□ -1.01
TTC28-201ENST00000397906 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
TTC28-201ENST00000397906 DAZ4Q86SG3 579 aaKnown RBP8.76□□□□□ -1.01
TTC28-201ENST00000397906 DAZ3Q9NR90 486 aaKnown RBP8.76□□□□□ -1.01
TTC28-201ENST00000397906 CHD3Q12873 2000 aaKnown RBP8.75□□□□□ -1.01
TTC28-201ENST00000397906 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
TTC28-201ENST00000397906 ZNF493Q6ZR52 646 aa8.75□□□□□ -1.01
TTC28-201ENST00000397906 NDUFA11Q86Y39 141 aa8.75□□□□□ -1.01
TTC28-201ENST00000397906 TECTAO75443 2155 aa8.75□□□□□ -1.01
TTC28-201ENST00000397906 C4orf48Q5BLP8 95 aa8.75□□□□□ -1.01
TTC28-201ENST00000397906 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 SH2D6Q7Z4S9 175 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 E7EUB6 86 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 CEND1Q8N111 149 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 IGHG2P01859 326 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 DAND5Q8N907 189 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 MSMPQ1L6U9 139 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 C9orf153Q5TBE3 101 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 NOTCH3Q9UM47 2321 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 TEX22C9J3V5 150 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 IGLL1P15814 213 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 TMEM61Q8N0U2 210 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 SPRY4Q9C004 299 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 LTBP2Q14767 1821 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 MAJINQ3KP22 176 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 LY6G6DO95868 133 aa8.74□□□□□ -1.01
TTC28-201ENST00000397906 TRBV7-3A0A075B6L6 115 aa8.73□□□□□ -1.01
TTC28-201ENST00000397906 C15orf53Q8NAA6 179 aa8.73□□□□□ -1.01
TTC28-201ENST00000397906 VSIG2Q96IQ7 327 aa8.73□□□□□ -1.01
TTC28-201ENST00000397906 MRPL36Q9P0J6 103 aaKnown RBP8.73□□□□□ -1.01
TTC28-201ENST00000397906 KRTAP27-1Q3LI81 207 aa8.73□□□□□ -1.01
TTC28-201ENST00000397906 Q6ZWC4 215 aa8.73□□□□□ -1.01
TTC28-201ENST00000397906 SRCAPQ6ZRS2 3230 aa8.73□□□□□ -1.01
TTC28-201ENST00000397906 MALRD1Q5VYJ5 2156 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms