RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 ZNF493Q6ZR52 646 aa11.22□□□□□ -0.61
VAMP1-202ENST00000396308 TMEM263Q8WUH6 116 aaKnown RBP11.22□□□□□ -0.61
VAMP1-202ENST00000396308 RCHY1Q96PM5 261 aa11.22□□□□□ -0.61
VAMP1-202ENST00000396308 M0R381 172 aa11.21□□□□□ -0.61
VAMP1-202ENST00000396308 SSTP61278 116 aa11.21□□□□□ -0.61
VAMP1-202ENST00000396308 ZNF705AQ6ZN79 300 aaPredicted RBP11.21□□□□□ -0.61
VAMP1-202ENST00000396308 FRZBQ92765 325 aa11.21□□□□□ -0.61
VAMP1-202ENST00000396308 SPXQ9BT56 116 aa11.21□□□□□ -0.61
VAMP1-202ENST00000396308 SSBP4Q9BWG4 385 aaPredicted RBP11.21□□□□□ -0.61
VAMP1-202ENST00000396308 CNFNQ9BYD5 112 aa11.21□□□□□ -0.61
VAMP1-202ENST00000396308 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.61
VAMP1-202ENST00000396308 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 RNASE3P12724 160 aaKnown RBP11.2□□□□□ -0.62
VAMP1-202ENST00000396308 DEFB135Q30KP9 77 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 Q6ZWC4 215 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 CSNK1G2-AS1Q8NCQ2 148 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 OR10AG1Q8NH19 301 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 C9orf85Q96MD7 179 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 AP1S3Q96PC3 154 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 GNB1LQ9BYB4 327 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 TRAPPC1Q9Y5R8 145 aa11.2□□□□□ -0.62
VAMP1-202ENST00000396308 MUC21A0A0G2JKD1 596 aa11.19□□□□□ -0.62
VAMP1-202ENST00000396308 MUC21A0A140T8X8 626 aa11.19□□□□□ -0.62
VAMP1-202ENST00000396308 A0A1B0GXF2 115 aa11.19□□□□□ -0.62
VAMP1-202ENST00000396308 FRMD6-AS1P0C7T7 363 aa11.19□□□□□ -0.62
VAMP1-202ENST00000396308 SMIM17P0DL12 118 aa11.19□□□□□ -0.62
VAMP1-202ENST00000396308 NTF3P20783 257 aa11.19□□□□□ -0.62
VAMP1-202ENST00000396308 SCRT2Q9NQ03 307 aa11.19□□□□□ -0.62
VAMP1-202ENST00000396308 MDFICQ9P1T7 246 aa11.19□□□□□ -0.62
VAMP1-202ENST00000396308 IGHV4-4A0A075B6R2 117 aa11.18□□□□□ -0.62
VAMP1-202ENST00000396308 GSN-AS1Q9NRJ2 163 aa11.18□□□□□ -0.62
VAMP1-202ENST00000396308 C1orf196B1AJZ1 125 aa11.17□□□□□ -0.62
VAMP1-202ENST00000396308 M0R2P5 195 aa11.17□□□□□ -0.62
VAMP1-202ENST00000396308 NXPH4O95158 308 aa11.17□□□□□ -0.62
VAMP1-202ENST00000396308 RNASE8Q8TDE3 154 aaKnown RBP11.17□□□□□ -0.62
VAMP1-202ENST00000396308 MRPL18Q9H0U6 180 aaKnown RBP11.17□□□□□ -0.62
VAMP1-202ENST00000396308 SPRY2O43597 315 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 APCSP02743 223 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 ZNF876PQ49A33 203 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 TMEM136Q6ZRR5 245 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 ZNF575Q86XF7 245 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 C11orf72Q8NBR9 251 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 OR11H2Q8NH07 326 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 NDUFAF3Q9BU61 184 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 TP53TG1Q9Y2A0 90 aa11.16□□□□□ -0.62
VAMP1-202ENST00000396308 MIFP14174 115 aa11.15□□□□□ -0.62
VAMP1-202ENST00000396308 FABP9Q0Z7S8 132 aa11.15□□□□□ -0.62
VAMP1-202ENST00000396308 DEFB121Q5J5C9 76 aa11.15□□□□□ -0.62
VAMP1-202ENST00000396308 GATD1Q8NB37 220 aa11.15□□□□□ -0.62
VAMP1-202ENST00000396308 PTH2Q96A98 100 aa11.15□□□□□ -0.62
VAMP1-202ENST00000396308 RNF183Q96D59 192 aa11.15□□□□□ -0.62
VAMP1-202ENST00000396308 TMEM191AQ9H0A3 160 aa11.15□□□□□ -0.62
VAMP1-202ENST00000396308 AZU1P20160 251 aa11.14□□□□□ -0.63
VAMP1-202ENST00000396308 RAB5BP61020 215 aa11.14□□□□□ -0.63
VAMP1-202ENST00000396308 DPH3P1Q9H4G8 78 aa11.14□□□□□ -0.63
VAMP1-202ENST00000396308 A8MWV9 139 aa11.13□□□□□ -0.63
VAMP1-202ENST00000396308 K7EIL1 84 aa11.13□□□□□ -0.63
VAMP1-202ENST00000396308 PRB2P02812 416 aaPredicted RBP11.13□□□□□ -0.63
VAMP1-202ENST00000396308 TRGC2P03986 189 aa11.13□□□□□ -0.63
VAMP1-202ENST00000396308 LGALS9BQ3B8N2 356 aa11.13□□□□□ -0.63
VAMP1-202ENST00000396308 X6R8D5 127 aa11.13□□□□□ -0.63
VAMP1-202ENST00000396308 TRGV1A0A0A0MS02 117 aa11.12□□□□□ -0.63
VAMP1-202ENST00000396308 PRM2P04554 102 aa11.12□□□□□ -0.63
VAMP1-202ENST00000396308 MGPP08493 103 aa11.12□□□□□ -0.63
VAMP1-202ENST00000396308 DAZ2Q13117 558 aaKnown RBP11.12□□□□□ -0.63
VAMP1-202ENST00000396308 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
VAMP1-202ENST00000396308 IL17DQ8TAD2 202 aa11.12□□□□□ -0.63
VAMP1-202ENST00000396308 MRPL16Q9NX20 251 aaKnown RBP11.12□□□□□ -0.63
VAMP1-202ENST00000396308 MSRB1Q9NZV6 116 aa11.12□□□□□ -0.63
VAMP1-202ENST00000396308 MUC4Q99102 2169 aa11.11□□□□□ -0.63
VAMP1-202ENST00000396308 RHODO00212 210 aa11.11□□□□□ -0.63
VAMP1-202ENST00000396308 EMP1P54849 157 aa11.11□□□□□ -0.63
VAMP1-202ENST00000396308 FAM104BQ5XKR9 115 aa11.11□□□□□ -0.63
VAMP1-202ENST00000396308 NOP10Q9NPE3 64 aaKnown RBP11.11□□□□□ -0.63
VAMP1-202ENST00000396308 TEX48A0A1B0GUV7 120 aa11.1□□□□□ -0.63
VAMP1-202ENST00000396308 PPBPP02775 128 aa11.1□□□□□ -0.63
VAMP1-202ENST00000396308 EVI2AP22794 236 aa11.1□□□□□ -0.63
VAMP1-202ENST00000396308 SLAQ13239 276 aa11.1□□□□□ -0.63
VAMP1-202ENST00000396308 FAM74A4Q5TZK3 123 aa11.1□□□□□ -0.63
VAMP1-202ENST00000396308 AMN1Q8IY45 258 aa11.1□□□□□ -0.63
VAMP1-202ENST00000396308 C14orf178Q8N769 122 aaPredicted RBP11.1□□□□□ -0.63
VAMP1-202ENST00000396308 MRAPQ8TCY5 172 aa11.1□□□□□ -0.63
VAMP1-202ENST00000396308 SPATA25Q9BR10 227 aa11.1□□□□□ -0.63
VAMP1-202ENST00000396308 TRGV2A0A075B6R0 118 aa11.09□□□□□ -0.63
VAMP1-202ENST00000396308 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
VAMP1-202ENST00000396308 LYRM9A8MSI8 78 aa11.09□□□□□ -0.63
VAMP1-202ENST00000396308 ZNF56Q15929 161 aa11.09□□□□□ -0.63
VAMP1-202ENST00000396308 RASL10AQ92737 203 aa11.09□□□□□ -0.63
VAMP1-202ENST00000396308 MRAP2Q96G30 205 aa11.09□□□□□ -0.63
VAMP1-202ENST00000396308 OVOL2Q9BRP0 275 aa11.09□□□□□ -0.63
VAMP1-202ENST00000396308 TMA7Q9Y2S6 64 aaKnown RBP11.09□□□□□ -0.63
VAMP1-202ENST00000396308 PKD1L1Q8TDX9 2849 aa11.09□□□□□ -0.63
VAMP1-202ENST00000396308 F5H697 171 aa11.08□□□□□ -0.64
VAMP1-202ENST00000396308 CKS2P33552 79 aa11.08□□□□□ -0.64
VAMP1-202ENST00000396308 ORMDL3Q8N138 153 aa11.08□□□□□ -0.64
VAMP1-202ENST00000396308 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
VAMP1-202ENST00000396308 A0A087WWL8 130 aa11.07□□□□□ -0.64
VAMP1-202ENST00000396308 PLAC8L1A1L4L8 177 aa11.07□□□□□ -0.64
VAMP1-202ENST00000396308 H7C1H1 209 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms