RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FAM208BQ5VWN6 2430 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 K7EMI3 77 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 C12orf74Q32Q52 190 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 C16orf54Q6UWD8 224 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 DUX5Q96PT3 197 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 F8W1H4 67 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 TGFAP01135 160 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 TNFRSF18Q9Y5U5 241 aa8.99□□□□□ -0.97
UBE2D3-209ENST00000394804 IGKV3D-20A0A0C4DH25 116 aa8.98□□□□□ -0.97
UBE2D3-209ENST00000394804 EBI3Q14213 229 aa8.98□□□□□ -0.97
UBE2D3-209ENST00000394804 ETDBQ3ZM63 59 aa8.98□□□□□ -0.97
UBE2D3-209ENST00000394804 SMAD5-AS1Q9Y6J3 95 aa8.98□□□□□ -0.97
UBE2D3-209ENST00000394804 RELNP78509 3460 aa8.98□□□□□ -0.97
UBE2D3-209ENST00000394804 RPL13AP40429 203 aaKnown RBP8.98□□□□□ -0.97
UBE2D3-209ENST00000394804 BSNQ9UPA5 3926 aa8.98□□□□□ -0.97
UBE2D3-209ENST00000394804 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
UBE2D3-209ENST00000394804 SPRY2O43597 315 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 LCNL1Q6ZST4 164 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 C5orf56Q8N8D9 126 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 RNF185Q96GF1 192 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 TRGV11A0A075B6L2 103 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 PMVKQ15126 192 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 NEGR1Q7Z3B1 354 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 CCDC140Q96MF4 163 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 BEX4Q9NWD9 120 aaPredicted RBP8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 PRSS29PA6NIE9 313 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 F6UB75 175 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 H3BMG7 143 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 RAX2Q96IS3 184 aa8.97□□□□□ -0.97
UBE2D3-209ENST00000394804 TRAV2A0A0B4J234 112 aa8.96□□□□□ -0.97
UBE2D3-209ENST00000394804 A8MWV9 139 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 MTURNQ8N3F0 131 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 IGHV7-4-1A0A0J9YVY3 117 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 SDHAF1A6NFY7 115 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 IGLL5B9A064 214 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 GNRH2O43555 120 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 AMTNQ6UX39 209 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 DUX3Q96PT4 197 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 ATP6V0BQ99437 205 aa8.96□□□□□ -0.98
UBE2D3-209ENST00000394804 CSPG4Q6UVK1 2322 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 RRN3P1Q2M238 152 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 TEX48A0A1B0GUV7 120 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 H3BUA1 57 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 NDUFS8O00217 210 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 GNLYP22749 145 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 Q8N6K4 173 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 DOPEY2Q9Y3R5 2298 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 ZNF876PQ49A33 203 aa8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 BBC3Q96PG8 261 aaPredicted RBP8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 TSSC4Q9Y5U2 329 aaPredicted RBP8.95□□□□□ -0.98
UBE2D3-209ENST00000394804 IGHV3-64A0A075B6Q5 118 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 CD28P10747 220 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 B4DSR2 109 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 ZNF462Q96JM2 2506 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 IGKV2D-26A0A0A0MRZ7 120 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 PLEKHB2Q96CS7 222 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 TMEM238C9JI98 176 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 FOXI2Q6ZQN5 318 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 ERG28Q9UKR5 140 aa8.94□□□□□ -0.98
UBE2D3-209ENST00000394804 A0A096LNJ9 63 aa8.93□□□□□ -0.98
UBE2D3-209ENST00000394804 MSMBP08118 114 aa8.93□□□□□ -0.98
UBE2D3-209ENST00000394804 CIRBPQ14011 172 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-209ENST00000394804 CNFNQ9BYD5 112 aa8.93□□□□□ -0.98
UBE2D3-209ENST00000394804 LINC01548A6NM66 108 aa8.93□□□□□ -0.98
UBE2D3-209ENST00000394804 TRPT1Q86TN4 253 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-209ENST00000394804 FGF6P10767 208 aa8.93□□□□□ -0.98
UBE2D3-209ENST00000394804 C11orf71Q6IPW1 123 aa8.92□□□□□ -0.98
UBE2D3-209ENST00000394804 COX8CQ7Z4L0 72 aa8.92□□□□□ -0.98
UBE2D3-209ENST00000394804 TOMM6Q96B49 74 aa8.92□□□□□ -0.98
UBE2D3-209ENST00000394804 CFAP46Q8IYW2 2715 aa8.92□□□□□ -0.98
UBE2D3-209ENST00000394804 G3V4G9 280 aa8.92□□□□□ -0.98
UBE2D3-209ENST00000394804 COL12A1Q99715 3063 aa8.92□□□□□ -0.98
UBE2D3-209ENST00000394804 F8W735 103 aaPredicted RBP8.92□□□□□ -0.98
UBE2D3-209ENST00000394804 MED14OSP0DP75 135 aa8.92□□□□□ -0.98
UBE2D3-209ENST00000394804 IGHV3OR16-12A0A075B7B8 117 aa8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 DEFB1P60022 68 aa8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 GAGE12HA6NDE8 117 aa8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 GAS8-AS1O95177 125 aa8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 SPINK13Q1W4C9 94 aa8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 UNQ9165/PRO28630Q6UXU0 137 aa8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 LMO4P61968 165 aa8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 TM2D2Q9BX73 214 aa8.91□□□□□ -0.98
UBE2D3-209ENST00000394804 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 IGHV1OR15-1A0A075B7D0 117 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 E9PLD3 99 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 TMEM262E9PQX1 116 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 SYNJ2BPP57105 145 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 BAALCQ8WXS3 180 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 LINC01587Q99440 93 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 C11orf21Q9P2W6 132 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 TRAV8-2A0A0B4J237 113 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 COX6B1P14854 86 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 WFDC2Q14508 124 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 PIP4P2Q8N4L2 257 aa8.9□□□□□ -0.98
UBE2D3-209ENST00000394804 KLK9Q9UKQ9 250 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 233.7 ms