RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
CDH16-202ENST00000394055 UBR5O95071 2799 aaPredicted RBP11.12□□□□□ -0.63
CDH16-202ENST00000394055 TMEM97Q5BJF2 176 aa11.12□□□□□ -0.63
CDH16-202ENST00000394055 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
CDH16-202ENST00000394055 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
CDH16-202ENST00000394055 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
CDH16-202ENST00000394055 HBDP02042 147 aa11.11□□□□□ -0.63
CDH16-202ENST00000394055 TCTAP57738 103 aa11.11□□□□□ -0.63
CDH16-202ENST00000394055 A6NDN8 102 aa11.1□□□□□ -0.63
CDH16-202ENST00000394055 OVOL1O14753 267 aa11.1□□□□□ -0.63
CDH16-202ENST00000394055 PSMB8P28062 276 aa11.1□□□□□ -0.63
CDH16-202ENST00000394055 MTURNQ8N3F0 131 aa11.1□□□□□ -0.63
CDH16-202ENST00000394055 LINC00477Q96M19 166 aa11.1□□□□□ -0.63
CDH16-202ENST00000394055 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
CDH16-202ENST00000394055 CREBBPQ92793 2442 aa11.1□□□□□ -0.63
CDH16-202ENST00000394055 RNASE4P34096 147 aaKnown RBP11.1□□□□□ -0.63
CDH16-202ENST00000394055 CACNG7P62955 275 aa11.09□□□□□ -0.63
CDH16-202ENST00000394055 SS18L2Q9UHA2 77 aa11.09□□□□□ -0.63
CDH16-202ENST00000394055 M0R381 172 aa11.08□□□□□ -0.63
CDH16-202ENST00000394055 TSPAN13O95857 204 aa11.08□□□□□ -0.63
CDH16-202ENST00000394055 MXRA5Q9NR99 2828 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 J3QR89 54 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 SNAI2O43623 268 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 LEPP41159 167 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 RAB37Q96AX2 223 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 DUX5Q96PT3 197 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 LENEPQ9Y5L5 61 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 S100A4P26447 101 aaKnown RBP11.08□□□□□ -0.64
CDH16-202ENST00000394055 ANXA2RQ3ZCQ2 193 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 C2orf91Q6ZV80 131 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 IFI27L1Q96BM0 104 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 SPATA25Q9BR10 227 aa11.08□□□□□ -0.64
CDH16-202ENST00000394055 BEX4Q9NWD9 120 aaPredicted RBP11.08□□□□□ -0.64
CDH16-202ENST00000394055 TLN2Q9Y4G6 2542 aa11.07□□□□□ -0.64
CDH16-202ENST00000394055 TRAV21A0A0B4J279 112 aa11.07□□□□□ -0.64
CDH16-202ENST00000394055 A0A1W2PPM0 123 aa11.07□□□□□ -0.64
CDH16-202ENST00000394055 IGHV4-31P0DP07 118 aa11.07□□□□□ -0.64
CDH16-202ENST00000394055 MS4A6AQ9H2W1 248 aa11.07□□□□□ -0.64
CDH16-202ENST00000394055 J3QLI3 93 aa11.07□□□□□ -0.64
CDH16-202ENST00000394055 CR1P17927 2039 aa11.06□□□□□ -0.64
CDH16-202ENST00000394055 TEX15Q9BXT5 2789 aa11.06□□□□□ -0.64
CDH16-202ENST00000394055 GNRH2O43555 120 aa11.06□□□□□ -0.64
CDH16-202ENST00000394055 VPREB3Q9UKI3 123 aa11.06□□□□□ -0.64
CDH16-202ENST00000394055 HOXA3O43365 443 aaPredicted RBP11.05□□□□□ -0.64
CDH16-202ENST00000394055 FABP2P12104 132 aa11.05□□□□□ -0.64
CDH16-202ENST00000394055 OR11H12B2RN74 326 aa11.05□□□□□ -0.64
CDH16-202ENST00000394055 ZNF688P0C7X2 276 aa11.05□□□□□ -0.64
CDH16-202ENST00000394055 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
CDH16-202ENST00000394055 OR11H1Q8NG94 326 aa11.05□□□□□ -0.64
CDH16-202ENST00000394055 OR11H2Q8NH07 326 aa11.05□□□□□ -0.64
CDH16-202ENST00000394055 NXT2Q9NPJ8 142 aaKnown RBP11.05□□□□□ -0.64
CDH16-202ENST00000394055 COX8AP10176 69 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 ASIPP42127 132 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 SYNJ2BPP57105 145 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 HERV-K104P63124 156 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 NRACQ8N912 160 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 DCANP1Q8TF63 244 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 TMEM158Q8WZ71 300 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 FAM19A4Q96LR4 140 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 MRPL16Q9NX20 251 aaKnown RBP11.04□□□□□ -0.64
CDH16-202ENST00000394055 SORL1Q92673 2214 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.04□□□□□ -0.64
CDH16-202ENST00000394055 K7EMT4 169 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 IGKV3-20P01619 116 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 DKK2Q9UBU2 259 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 LGALS9CQ6DKI2 356 aa11.04□□□□□ -0.64
CDH16-202ENST00000394055 IGHV4-4A0A075B6R2 117 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 FCER1GP30273 86 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 DEFB113Q30KQ7 82 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 C14orf178Q8N769 122 aaPredicted RBP11.03□□□□□ -0.64
CDH16-202ENST00000394055 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 PSMG4Q5JS54 123 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 Q6YL49 198 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 Q8N8P6 123 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 Q96MF0 132 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 ZNF702PQ9H963 129 aa11.03□□□□□ -0.64
CDH16-202ENST00000394055 IGLV2-18A0A075B6J9 118 aa11.02□□□□□ -0.65
CDH16-202ENST00000394055 IGHV4OR15-8A0A075B7B6 117 aa11.02□□□□□ -0.65
CDH16-202ENST00000394055 A0A087WW49 117 aa11.02□□□□□ -0.65
CDH16-202ENST00000394055 ID1P41134 155 aa11.02□□□□□ -0.65
CDH16-202ENST00000394055 MYO9AB2RTY4 2548 aa11.02□□□□□ -0.65
CDH16-202ENST00000394055 FSHBP01225 129 aa11.02□□□□□ -0.65
CDH16-202ENST00000394055 SONP18583 2426 aaKnown RBP11.02□□□□□ -0.65
CDH16-202ENST00000394055 MGPP08493 103 aa11.01□□□□□ -0.65
CDH16-202ENST00000394055 AGRNO00468 2067 aa11.01□□□□□ -0.65
CDH16-202ENST00000394055 PRSS1P07477 247 aa11.01□□□□□ -0.65
CDH16-202ENST00000394055 RNASE3P12724 160 aaKnown RBP11.01□□□□□ -0.65
CDH16-202ENST00000394055 PRRC2AP48634 2157 aaKnown RBP11□□□□□ -0.65
CDH16-202ENST00000394055 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
CDH16-202ENST00000394055 TRBV7-9A0A0J9YWB2 115 aa11□□□□□ -0.65
CDH16-202ENST00000394055 LINC01546A6NGU7 62 aa11□□□□□ -0.65
CDH16-202ENST00000394055 HIST2H2BDQ6DRA6 164 aa11□□□□□ -0.65
CDH16-202ENST00000394055 DEFB136Q30KP8 78 aa11□□□□□ -0.65
CDH16-202ENST00000394055 SAMD5Q5TGI4 173 aa11□□□□□ -0.65
CDH16-202ENST00000394055 C18orf65Q6ZTR6 163 aa11□□□□□ -0.65
CDH16-202ENST00000394055 RPL39LQ96EH5 51 aaKnown RBP11□□□□□ -0.65
CDH16-202ENST00000394055 SPAG8Q99932 426 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms