RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 MALRD1Q5VYJ5 2156 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 LY6EQ16553 131 aa6.64□□□□□ -1.35
GABRA1-202ENST00000393943 A0A096LNJ9 63 aa6.63□□□□□ -1.35
GABRA1-202ENST00000393943 IGKV3D-20A0A0C4DH25 116 aa6.63□□□□□ -1.35
GABRA1-202ENST00000393943 Q6Q795 121 aa6.63□□□□□ -1.35
GABRA1-202ENST00000393943 PIP4P1Q86T03 277 aa6.63□□□□□ -1.35
GABRA1-202ENST00000393943 WNK2Q9Y3S1 2297 aa6.63□□□□□ -1.35
GABRA1-202ENST00000393943 IGHV7-4-1A0A0J9YVY3 117 aa6.63□□□□□ -1.35
GABRA1-202ENST00000393943 M0QXV9 152 aa6.63□□□□□ -1.35
GABRA1-202ENST00000393943 SS18L2Q9UHA2 77 aa6.63□□□□□ -1.35
GABRA1-202ENST00000393943 A0A1W2PNU3 283 aaPredicted RBP6.62□□□□□ -1.35
GABRA1-202ENST00000393943 LY6LH3BQJ8 138 aa6.62□□□□□ -1.35
GABRA1-202ENST00000393943 MRPS12O15235 138 aaKnown RBP6.62□□□□□ -1.35
GABRA1-202ENST00000393943 TCL1BO95988 128 aa6.62□□□□□ -1.35
GABRA1-202ENST00000393943 IGKV3-20P01619 116 aa6.62□□□□□ -1.35
GABRA1-202ENST00000393943 RPL39LQ96EH5 51 aaKnown RBP6.62□□□□□ -1.35
GABRA1-202ENST00000393943 PRAC2D3DTV9 90 aa6.62□□□□□ -1.35
GABRA1-202ENST00000393943 MAPKAPK5-AS1Q8N8E1 139 aa6.62□□□□□ -1.35
GABRA1-202ENST00000393943 NRACQ8N912 160 aa6.62□□□□□ -1.35
GABRA1-202ENST00000393943 DNAJC30Q96LL9 226 aa6.62□□□□□ -1.35
GABRA1-202ENST00000393943 ICOSQ9Y6W8 199 aa6.62□□□□□ -1.35
GABRA1-202ENST00000393943 NDUFV3P56181 108 aaKnown RBP6.62□□□□□ -1.35
GABRA1-202ENST00000393943 SRCAPQ6ZRS2 3230 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 A0A0J9YY99 117 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 ODF3BA8MYP8 253 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 MT-ATP8P03928 68 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 EBI3Q14213 229 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 SUMO4Q6EEV6 95 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 Q8N9W7 124 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 MDFICQ9P1T7 246 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 HERVK_113P63121 156 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 RNF183Q96D59 192 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 RPL36AP83881 106 aaKnown RBP6.61□□□□□ -1.35
GABRA1-202ENST00000393943 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 KLHL30-AS1Q8NEE0 82 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 RPL36ALQ969Q0 106 aaKnown RBP6.61□□□□□ -1.35
GABRA1-202ENST00000393943 LINC01587Q99440 93 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 TRAV13-2A0A0B4J235 113 aa6.61□□□□□ -1.35
GABRA1-202ENST00000393943 CMC4P56277 68 aaPredicted RBP6.6□□□□□ -1.35
GABRA1-202ENST00000393943 G3V318 75 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 HERV-K104P63124 156 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 ODF3Q96PU9 254 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 TRIOBPQ9H2D6 2365 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 PLCE1Q9P212 2302 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 TRBV30A0A0K0K1B3 111 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 TMEM86BQ8N661 226 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 IMUPQ9GZP8 106 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 ROS1P08922 2347 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 PKDREJQ9NTG1 2253 aa6.6□□□□□ -1.35
GABRA1-202ENST00000393943 CEP250Q9BV73 2442 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 CENPVL3A0A0U1RRI6 287 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 UBE2D1P51668 147 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 PRIMA1Q86XR5 153 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 CITED1Q99966 193 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 K7EMT4 169 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 OVOL3O00110 214 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 TNFRSF13BO14836 293 aaPredicted RBP6.59□□□□□ -1.35
GABRA1-202ENST00000393943 TET2Q6N021 2002 aaPredicted RBP6.59□□□□□ -1.35
GABRA1-202ENST00000393943 CACNA1GO43497 2377 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 NSUN5P1Q3KNT7 163 aa6.59□□□□□ -1.35
GABRA1-202ENST00000393943 IGHV4OR15-8A0A075B7B6 117 aa6.59□□□□□ -1.36
GABRA1-202ENST00000393943 A0A087WW49 117 aa6.59□□□□□ -1.36
GABRA1-202ENST00000393943 ADARB2-AS1A8MUL3 147 aa6.59□□□□□ -1.36
GABRA1-202ENST00000393943 RNF152Q8N8N0 203 aa6.59□□□□□ -1.36
GABRA1-202ENST00000393943 PSMG3-AS1Q96PY0 264 aa6.59□□□□□ -1.36
GABRA1-202ENST00000393943 ATOX1O00244 68 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 Q8N1Y9 231 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 A0A0J9YX75 114 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 A0A0J9YXY3 114 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 GNRH2O43555 120 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 DSCR9P59020 149 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 UBE2D3P61077 147 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 UBE2D2P62837 147 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 PHLDA1Q8WV24 401 aaPredicted RBP6.58□□□□□ -1.36
GABRA1-202ENST00000393943 WFDC12Q8WWY7 111 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 ZFAND3Q9H8U3 227 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 GAGE2AQ6NT46 116 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 TMEM219Q86XT9 240 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 C20orf203Q8NBC4 194 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 IGHV3-30P01768 117 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 IGHV3-30-5P0DP03 117 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 FBXL19-AS1Q494R0 122 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 LINC00643Q86TS7 51 aa6.58□□□□□ -1.36
GABRA1-202ENST00000393943 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 INSP01308 110 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 GATA3P23771 443 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 ATP5J2P56134 94 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 PTH2Q96A98 100 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 CCL19Q99731 98 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 EDA2RQ9HAV5 297 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 SMAD5-AS1Q9Y6J3 95 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 SOCS3O14543 225 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 IGHV3-33P01772 117 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 NFE4Q86UQ8 179 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 IGHV1-58A0A0C4DH39 117 aa6.57□□□□□ -1.36
GABRA1-202ENST00000393943 H3BUX3 64 aa6.56□□□□□ -1.36
GABRA1-202ENST00000393943 TRACP01848 142 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms