RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 F8VRH5 84 aa11.14□□□□□ -0.63
SFXN3-202ENST00000393459 HTN1P15515 57 aa11.14□□□□□ -0.63
SFXN3-202ENST00000393459 ZMAT4Q9H898 229 aa11.14□□□□□ -0.63
SFXN3-202ENST00000393459 DPM3Q9P2X0 92 aa11.14□□□□□ -0.63
SFXN3-202ENST00000393459 ZNF256Q9Y2P7 627 aaPredicted RBP11.14□□□□□ -0.63
SFXN3-202ENST00000393459 C9JAW5 83 aa11.14□□□□□ -0.63
SFXN3-202ENST00000393459 NRACQ8N912 160 aa11.14□□□□□ -0.63
SFXN3-202ENST00000393459 C16orf92Q96LL3 132 aa11.14□□□□□ -0.63
SFXN3-202ENST00000393459 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
SFXN3-202ENST00000393459 H7C1H1 209 aa11.13□□□□□ -0.63
SFXN3-202ENST00000393459 C1QTNF4Q9BXJ3 329 aa11.13□□□□□ -0.63
SFXN3-202ENST00000393459 PHLDA3Q9Y5J5 127 aa11.13□□□□□ -0.63
SFXN3-202ENST00000393459 IGHV3-11P01762 117 aa11.13□□□□□ -0.63
SFXN3-202ENST00000393459 TRAV2A0A0B4J234 112 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
SFXN3-202ENST00000393459 TMEM30BQ3MIR4 351 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 ZANQ9Y493 2812 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 IGLV2-18A0A075B6J9 118 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 ANKRD29Q8N6D5 301 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 USP9XQ93008 2570 aaPredicted RBP11.12□□□□□ -0.63
SFXN3-202ENST00000393459 IGLV11-55A0A075B6I3 123 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 CFAP126Q5VTH2 177 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 RASL10AQ92737 203 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 ZNF580Q9UK33 172 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
SFXN3-202ENST00000393459 VSTM5A8MXK1 200 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 K7ENP7 123 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
SFXN3-202ENST00000393459 SMIM2Q9BVW6 85 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 MSRB2Q9Y3D2 182 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 ITPR1Q14643 2758 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 C11orf86A6NJI1 115 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 SCGB2A1O75556 95 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 SMPXQ9UHP9 88 aa11.11□□□□□ -0.63
SFXN3-202ENST00000393459 PRSS2P07478 247 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 SUMO2P61956 95 aaKnown RBP11.1□□□□□ -0.63
SFXN3-202ENST00000393459 PDE6HQ13956 83 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 BAALCQ8WXS3 180 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 RAB1BQ9H0U4 201 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 HIVEP3Q5T1R4 2406 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 IGHV7-4-1A0A0J9YVY3 117 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 SHISA9B4DS77 424 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 PLNP26678 52 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 ZNF672Q499Z4 452 aaPredicted RBP11.1□□□□□ -0.63
SFXN3-202ENST00000393459 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 NUP37Q8NFH4 326 aa11.1□□□□□ -0.63
SFXN3-202ENST00000393459 CRLF1O75462 422 aa11.09□□□□□ -0.63
SFXN3-202ENST00000393459 TSPEAR-AS2P59090 65 aa11.09□□□□□ -0.63
SFXN3-202ENST00000393459 UBTD1Q9HAC8 227 aa11.09□□□□□ -0.63
SFXN3-202ENST00000393459 TP53TG1Q9Y2A0 90 aa11.09□□□□□ -0.63
SFXN3-202ENST00000393459 Q6ZSV7 163 aa11.09□□□□□ -0.63
SFXN3-202ENST00000393459 Q8NA96 180 aa11.09□□□□□ -0.63
SFXN3-202ENST00000393459 AJUBAQ96IF1 538 aa11.09□□□□□ -0.63
SFXN3-202ENST00000393459 A0A0U1RRA0 63 aa11.08□□□□□ -0.64
SFXN3-202ENST00000393459 ATP6V0E1O15342 81 aa11.08□□□□□ -0.64
SFXN3-202ENST00000393459 BUB3O43684 328 aa11.07□□□□□ -0.64
SFXN3-202ENST00000393459 ELANEP08246 267 aa11.07□□□□□ -0.64
SFXN3-202ENST00000393459 MUC4Q99102 2169 aa11.07□□□□□ -0.64
SFXN3-202ENST00000393459 A8MWV9 139 aa11.07□□□□□ -0.64
SFXN3-202ENST00000393459 TEX29Q8N6K0 151 aa11.07□□□□□ -0.64
SFXN3-202ENST00000393459 NTN5Q8WTR8 489 aaPredicted RBP11.07□□□□□ -0.64
SFXN3-202ENST00000393459 UTP20O75691 2785 aaKnown RBP11.07□□□□□ -0.64
SFXN3-202ENST00000393459 TRAV4A0A0B4J268 109 aa11.07□□□□□ -0.64
SFXN3-202ENST00000393459 TRBV6-1A0A0K0K1D8 114 aa11.07□□□□□ -0.64
SFXN3-202ENST00000393459 TNFRSF13BO14836 293 aaPredicted RBP11.07□□□□□ -0.64
SFXN3-202ENST00000393459 TRBV12-3P01733 135 aa11.07□□□□□ -0.64
SFXN3-202ENST00000393459 IGHV3-73A0A0B4J1V6 119 aa11.06□□□□□ -0.64
SFXN3-202ENST00000393459 CD3EP07766 207 aa11.06□□□□□ -0.64
SFXN3-202ENST00000393459 C20orf173Q96LM9 149 aa11.06□□□□□ -0.64
SFXN3-202ENST00000393459 IGHV7-81A0A0B4J1V7 117 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 LINC01559Q495D7 138 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 SMIM20Q8N5G0 67 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 TEX49A0A1B0GTD5 131 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 CCDC179H3BU77 68 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 CFC1BP0CG36 223 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 CFC1P0CG37 223 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 SCGB1A1P11684 91 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 EDN2P20800 178 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 UCNP55089 124 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 OR11H6Q8NGC7 330 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 ZNF48Q96MX3 618 aaPredicted RBP11.05□□□□□ -0.64
SFXN3-202ENST00000393459 TTC32Q5I0X7 151 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 VMO1Q7Z5L0 202 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
SFXN3-202ENST00000393459 TMEM238LA0A1B0GVL6 79 aa11.04□□□□□ -0.64
SFXN3-202ENST00000393459 A4D1N5 150 aa11.04□□□□□ -0.64
SFXN3-202ENST00000393459 A6NJY4 79 aa11.04□□□□□ -0.64
SFXN3-202ENST00000393459 ZFAND6Q6FIF0 208 aa11.04□□□□□ -0.64
SFXN3-202ENST00000393459 NEXN-AS1Q8NBZ9 246 aa11.04□□□□□ -0.64
SFXN3-202ENST00000393459 CACNA1AO00555 2505 aa11.04□□□□□ -0.64
SFXN3-202ENST00000393459 A8MZ25 164 aa11.04□□□□□ -0.64
SFXN3-202ENST00000393459 UNQ9165/PRO28630Q6UXU0 137 aa11.04□□□□□ -0.64
SFXN3-202ENST00000393459 TRAV12-2A0A075B6T6 113 aa11.03□□□□□ -0.64
SFXN3-202ENST00000393459 CLPSL1A2RUU4 121 aa11.03□□□□□ -0.64
SFXN3-202ENST00000393459 SLC25A20O43772 301 aa11.03□□□□□ -0.64
SFXN3-202ENST00000393459 TCTEX1D4Q5JR98 221 aa11.03□□□□□ -0.64
SFXN3-202ENST00000393459 TEN1Q86WV5 123 aa11.03□□□□□ -0.64
SFXN3-202ENST00000393459 PPDPFLQ8WWR9 84 aa11.03□□□□□ -0.64
SFXN3-202ENST00000393459 KAAG1Q9UBP8 84 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms