RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 LRCOL1A6NCL2 159 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 HIGD2AQ9BW72 106 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 MTCL1Q9Y4B5 1905 aaKnown RBP3.12□□□□□ -1.91
UBR3-202ENST00000392632 STRCP1A6NGW2 1772 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 A4D1N5 150 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 USP17L23D6RBM5 183 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 MED14OSP0DP75 135 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 MIFP14174 115 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 C17orf58Q2M2W7 97 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 DEFB136Q30KP8 78 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 PRR31Q5SQ13 230 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 CRIPAKQ8N1N5 446 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 DEFB125Q8N687 156 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 HIST1H2BLQ99880 126 aa3.12□□□□□ -1.91
UBR3-202ENST00000392632 ZFC3H1O60293 1989 aaKnown RBP3.12□□□□□ -1.91
UBR3-202ENST00000392632 F8W1H4 67 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 NDUFC2O95298 119 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 CFC1BP0CG36 223 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 CFC1P0CG37 223 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 C16orf54Q6UWD8 224 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 NPBQ8NG41 125 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 AGPAT4-IT1Q9H0P7 198 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 LINC00474Q9P2X8 69 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 A0A087X0K7 114 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 IGKV2-24A0A0C4DH68 120 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 CRYBA4P53673 196 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 MLANAQ16655 118 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 APRG1Q8IVJ8 170 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 WFDC1Q9HC57 220 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 IGHV4-28A0A0C4DH34 117 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 SIVA1O15304 175 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 PRB1P04280 392 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 P0DMU3 169 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 FAM231AP0DMU4 169 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 FAM231CP0DMU5 169 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 COX7BP24311 80 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 WT1-ASQ06250 92 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 Q6ZR03 302 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 PRR15LQ9BU68 103 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 ZNRD1Q9P1U0 126 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 MIA3Q5JRA6 1907 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 SCN8AQ9UQD0 1980 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 DOCK6Q96HP0 2047 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 SCN2AQ99250 2005 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 HIVEP3Q5T1R4 2406 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 IGHV4-4A0A075B6R2 117 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 IGHV1-58A0A0C4DH39 117 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 TNFRSF13BO14836 293 aaPredicted RBP3.11□□□□□ -1.91
UBR3-202ENST00000392632 TCL1BO95988 128 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 CRYGDP07320 174 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 MRPL35Q9NZE8 188 aaKnown RBP3.11□□□□□ -1.91
UBR3-202ENST00000392632 MED13Q9UHV7 2174 aa3.11□□□□□ -1.91
UBR3-202ENST00000392632 IGKV2D-26A0A0A0MRZ7 120 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 NDUFS7O75251 213 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 NDUFS6O75380 124 aaKnown RBP3.1□□□□□ -1.91
UBR3-202ENST00000392632 IGHV4-38-2P0DP08 117 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 Q8N1Y9 231 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.1□□□□□ -1.91
UBR3-202ENST00000392632 TET1Q8NFU7 2136 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.1□□□□□ -1.91
UBR3-202ENST00000392632 TRBV10-2A0A0K0K1G8 114 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 IGKV2-29A2NJV5 120 aaPredicted RBP3.1□□□□□ -1.91
UBR3-202ENST00000392632 TMEM256-PLSCR3K7ERE1 68 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 NPSP0C0P6 89 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 LYL1P12980 280 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 UBE2D3P61077 147 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 CD300CQ08708 224 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.1□□□□□ -1.91
UBR3-202ENST00000392632 SERP1Q9Y6X1 66 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 DOCK3Q8IZD9 2030 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 WDR90Q96KV7 1748 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 IGHV4OR15-8A0A075B7B6 117 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 A0A087WW49 117 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 GAGE12HA6NDE8 117 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 DNAJC9-AS1A6NH13 148 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 PSMB8P28062 276 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 BLCAPP62952 87 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 RNF185Q96GF1 192 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 RSPO3Q9BXY4 272 aaPredicted RBP3.1□□□□□ -1.91
UBR3-202ENST00000392632 CHD5Q8TDI0 1954 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 CHD8Q9HCK8 2581 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 IGHV7-81A0A0B4J1V7 117 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 LY6G6EA0A0G2JKS1 128 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 HIST3H2BBQ8N257 126 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 C18orf32Q8TCD1 76 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 C11orf52Q96A22 123 aa3.1□□□□□ -1.91
UBR3-202ENST00000392632 NAA38Q9BRA0 125 aaKnown RBP3.1□□□□□ -1.91
UBR3-202ENST00000392632 YLPM1P49750 1951 aaKnown RBP3.09□□□□□ -1.91
UBR3-202ENST00000392632 IGKV1-6A0A0C4DH72 117 aa3.09□□□□□ -1.91
UBR3-202ENST00000392632 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.09□□□□□ -1.91
UBR3-202ENST00000392632 J3QRE1 110 aa3.09□□□□□ -1.91
UBR3-202ENST00000392632 NPYP01303 97 aa3.09□□□□□ -1.91
UBR3-202ENST00000392632 CXCL1P09341 107 aa3.09□□□□□ -1.91
UBR3-202ENST00000392632 GATA1P15976 413 aaPredicted RBP3.09□□□□□ -1.91
UBR3-202ENST00000392632 UBE2V1Q13404 147 aa3.09□□□□□ -1.91
UBR3-202ENST00000392632 C15orf65H3BRN8 121 aa3.09□□□□□ -1.91
UBR3-202ENST00000392632 ATOX1O00244 68 aa3.09□□□□□ -1.91
UBR3-202ENST00000392632 DLEU1O43261 78 aa3.09□□□□□ -1.91
UBR3-202ENST00000392632 WT1P19544 449 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms