RNA–Protein interactions for RNA: ENST00000390887.1

RNU6-328P-201, Transcript of RNA, U6 small nuclear 328, pseudogene, humanhuman

BASIC

Gene RNU6-328P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-328P-201ENST00000390887 SHROOM3Q8TF72 1996 aa2.7□□□□□ -1.98
RNU6-328P-201ENST00000390887 AGRNO00468 2067 aa2.7□□□□□ -1.98
RNU6-328P-201ENST00000390887 PHF3Q92576 2039 aaKnown RBP2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 COL18A1P39060 1754 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 DYSFO75923 2080 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 NCOA6Q14686 2063 aaPredicted RBP2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 DOCK11Q5JSL3 2073 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 IGLV3-32A0A0A0MS00 114 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 IGHV1-69DA0A0B4J2H0 117 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 TRBV30A0A0K0K1B3 111 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 TEX49A0A1B0GTD5 131 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 IQCF6A8MYZ5 107 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 ERC2-IT1O76042 136 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 SAA1P0DJI8 122 aaPredicted RBP2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 MGST1P10620 155 aaKnown RBP2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 FUSP35637 526 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 CIRBPQ14011 172 aaKnown RBP2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 FOXL2NBQ6ZUU3 175 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 PRNTQ86SH4 94 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 CCL4L1Q8NHW4 92 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 CHCHD10Q8WYQ3 142 aaPredicted RBP2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 PLA2G12AQ9BZM1 189 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 FGF22Q9HCT0 170 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 LINC00474Q9P2X8 69 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 SPRR3Q9UBC9 169 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 PRO1854Q9UHT4 67 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 PLXNB3Q9ULL4 1909 aa2.69□□□□□ -1.98
RNU6-328P-201ENST00000390887 POLEQ07864 2286 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 GREB1Q4ZG55 1949 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 IGLV3-10A0A075B6K4 115 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 IGKV1D-17A0A075B6S4 117 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 TMSB15BA0A087X1C1 80 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 TRGV8A0A0C4DH27 118 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 LINC01546A6NGU7 62 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 COX7A2P2O60397 106 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 CFC1BP0CG36 223 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 CFC1P0CG37 223 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 CD28P10747 220 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 RPL38P63173 70 aaKnown RBP2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 PLGLAQ15195 96 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 C2orf82Q6UX34 121 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 RPS27LQ71UM5 84 aaKnown RBP2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 SCXQ7RTU7 201 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 FAM72BQ86X60 149 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 LYPD6Q86Y78 171 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 FAM223AQ8IWN6 122 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 ODF3L1Q8IXM7 274 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 ZNF525Q8N782 197 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 FAM216BQ8N7L0 139 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 PRSS33Q8NF86 280 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 ZNF524Q96C55 264 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 Q96M85 177 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 GFRA4Q9GZZ7 299 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 CYP4F30PQ9H0H9 118 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 ZNF702PQ9H963 129 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 UBE2D4Q9Y2X8 147 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 MGAMO43451 1857 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 DOCK7Q96N67 2140 aa2.68□□□□□ -1.98
RNU6-328P-201ENST00000390887 C3orf84H3BNL1 204 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 FRMD6-AS1P0C7T7 363 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 IGHV4-30-4P0DP06 118 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 ZNF22P17026 224 aaPredicted RBP2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 FGF12P61328 243 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 EIF4EBP1Q13541 118 aaPredicted RBP2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 KIAA2026Q5HYC2 2103 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 S100A7L2Q5SY68 101 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 PATE2Q6UY27 113 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 ITLN1Q8WWA0 313 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 ITLN2Q8WWU7 325 aaPredicted RBP2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 PTPRSQ13332 1948 aa2.67□□□□□ -1.98
RNU6-328P-201ENST00000390887 COL2A1P02458 1487 aaPredicted RBP2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 IGHV4OR15-8A0A075B7B6 117 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 A0A0G2JRQ6 117 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 FAM223BA6NKX1 122 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 H7C423 109 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 GNRH2O43555 120 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 SH2D1AO60880 128 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 LINC00271P0C7V0 271 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 RPS21P63220 83 aaKnown RBP2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 GDF5OSQ5U4N7 250 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 SPANXN1Q5VSR9 72 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 IGFL3Q6UXB1 125 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 ZNF826PQ6ZT77 177 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 C20orf197Q8N268 126 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 ZNF843Q8N446 348 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 SMCR5Q8TEV8 140 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 UBR3Q6ZT12 1888 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 SCN3AQ9NY46 2000 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 COL4A6Q14031 1691 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 LRP4O75096 1905 aa2.66□□□□□ -1.98
RNU6-328P-201ENST00000390887 NUP98P52948 1817 aa2.65□□□□□ -1.98
RNU6-328P-201ENST00000390887 BRWD3Q6RI45 1802 aa2.65□□□□□ -1.98
RNU6-328P-201ENST00000390887 TNS1Q9HBL0 1735 aaKnown RBP2.65□□□□□ -1.98
RNU6-328P-201ENST00000390887 THADAQ6YHU6 1953 aa2.65□□□□□ -1.98
RNU6-328P-201ENST00000390887 PCDH15Q96QU1 1955 aa2.65□□□□□ -1.98
RNU6-328P-201ENST00000390887 IGKV1-27A0A075B6S5 117 aa2.65□□□□□ -1.99
RNU6-328P-201ENST00000390887 IGHV3OR16-13A0A075B7E8 117 aa2.65□□□□□ -1.99
RNU6-328P-201ENST00000390887 IGKV2D-26A0A0A0MRZ7 120 aa2.65□□□□□ -1.99
RNU6-328P-201ENST00000390887 IGHV1-45A0A0A0MS14 117 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms