RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 EBI3Q14213 229 aa9.01□□□□□ -0.97
RAPGEF3-201ENST00000389212 MRPL51Q4U2R6 128 aaKnown RBP9.01□□□□□ -0.97
RAPGEF3-201ENST00000389212 A8MWV9 139 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 TMEM262E9PQX1 116 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 SRSF2Q01130 221 aaKnown RBP9□□□□□ -0.97
RAPGEF3-201ENST00000389212 CCDC140Q96MF4 163 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 TMEM8BA6NDV4 472 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 HOXA3O43365 443 aaPredicted RBP9□□□□□ -0.97
RAPGEF3-201ENST00000389212 CRLF1O75462 422 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 ZFP2Q6ZN57 461 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 IL17RELQ6ZVW7 336 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 CITED2Q99967 270 aaPredicted RBP9□□□□□ -0.97
RAPGEF3-201ENST00000389212 A0A096LNJ9 63 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 LMO4P61968 165 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 RRN3P1Q2M238 152 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 ZC2HC1BQ5TFG8 222 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 FAM104BQ5XKR9 115 aa9□□□□□ -0.97
RAPGEF3-201ENST00000389212 NPYP01303 97 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 UBE2E1P51965 193 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 ZNF575Q86XF7 245 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 LINC01549A6NIU2 74 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 GNLYP22749 145 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 EFNA4P52798 201 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 C9orf153Q5TBE3 101 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 FAM110DQ8TAY7 271 aaPredicted RBP8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 CRYBG3Q68DQ2 2970 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 OOSP1A8MZH6 123 aa8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 GATA1P15976 413 aaPredicted RBP8.99□□□□□ -0.97
RAPGEF3-201ENST00000389212 CELSR2Q9HCU4 2923 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 CLPSL1A2RUU4 121 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 RHODO00212 210 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 BUB3O43684 328 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 CKS2P33552 79 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 SRSF1Q07955 248 aaKnown RBP eCLIP8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 ORMDL3Q8N138 153 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 CENPVL3A0A0U1RRI6 287 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 NPFFO15130 113 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 SPRY2O43597 315 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 TNFRSF6BO95407 300 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 DEFB1P60022 68 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 SCGB1D4Q6XE38 83 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 CSMD2Q7Z408 3487 aa8.98□□□□□ -0.97
RAPGEF3-201ENST00000389212 LY6EQ16553 131 aa8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 FOXC2Q99958 501 aa8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 FLNCQ14315 2725 aa8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 UTP20O75691 2785 aaKnown RBP8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 CFAP46Q8IYW2 2715 aa8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 F5H768 121 aa8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 ZNF493Q6ZR52 646 aa8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 FAM19A5Q7Z5A7 132 aaPredicted RBP8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 C15orf53Q8NAA6 179 aa8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 ITLN2Q8WWU7 325 aaPredicted RBP8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 NRGNQ92686 78 aa8.97□□□□□ -0.97
RAPGEF3-201ENST00000389212 IGKV3-7A0A075B6H7 116 aa8.96□□□□□ -0.97
RAPGEF3-201ENST00000389212 TRBV12-3P01733 135 aa8.96□□□□□ -0.97
RAPGEF3-201ENST00000389212 TEN1Q86WV5 123 aa8.96□□□□□ -0.97
RAPGEF3-201ENST00000389212 C11orf21Q9P2W6 132 aa8.96□□□□□ -0.97
RAPGEF3-201ENST00000389212 TRAV40A0A0B4J280 105 aa8.96□□□□□ -0.98
RAPGEF3-201ENST00000389212 IGHV4-39P01824 125 aa8.96□□□□□ -0.98
RAPGEF3-201ENST00000389212 ANKRD29Q8N6D5 301 aa8.96□□□□□ -0.98
RAPGEF3-201ENST00000389212 GATD1Q8NB37 220 aa8.96□□□□□ -0.98
RAPGEF3-201ENST00000389212 CARD19Q96LW7 228 aa8.96□□□□□ -0.98
RAPGEF3-201ENST00000389212 AGPAT4-IT1Q9H0P7 198 aa8.96□□□□□ -0.98
RAPGEF3-201ENST00000389212 DOPEY2Q9Y3R5 2298 aa8.96□□□□□ -0.98
RAPGEF3-201ENST00000389212 OR13C6PQ8NH95 151 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 C9JAW5 83 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 IGHV3-11P01762 117 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 IGLC6P0CF74 106 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 C5orf56Q8N8D9 126 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 BEX4Q9NWD9 120 aaPredicted RBP8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 IGF1P05019 195 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 LGALS9BQ3B8N2 356 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 LGALS9CQ6DKI2 356 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 PRO0461Q9UI25 63 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 POLQO75417 2590 aa8.95□□□□□ -0.98
RAPGEF3-201ENST00000389212 CACNA1AO00555 2505 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 EEF1AKMT3Q96AZ1 226 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 USP9XQ93008 2570 aaPredicted RBP8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 USP9YO00507 2555 aaPredicted RBP8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 PIEZO1Q92508 2521 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 IGKV3D-20A0A0C4DH25 116 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 IGHV4-61A0A0C4DH41 118 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 HBDP02042 147 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 TRGV3P03979 118 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 CFAP126Q5VTH2 177 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 RNF185Q96GF1 192 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 C1orf43Q9BWL3 253 aa8.94□□□□□ -0.98
RAPGEF3-201ENST00000389212 TRAV26-2A0A0B4J265 109 aa8.93□□□□□ -0.98
RAPGEF3-201ENST00000389212 PHLDA1Q8WV24 401 aaPredicted RBP8.93□□□□□ -0.98
RAPGEF3-201ENST00000389212 METTL26Q96S19 204 aa8.93□□□□□ -0.98
RAPGEF3-201ENST00000389212 U3KQK5 164 aa8.93□□□□□ -0.98
RAPGEF3-201ENST00000389212 CENPEQ02224 2701 aa8.93□□□□□ -0.98
RAPGEF3-201ENST00000389212 IGHV4-38-2P0DP08 117 aa8.93□□□□□ -0.98
RAPGEF3-201ENST00000389212 ZNF56Q15929 161 aa8.93□□□□□ -0.98
RAPGEF3-201ENST00000389212 Q1RN00 199 aa8.93□□□□□ -0.98
RAPGEF3-201ENST00000389212 UNQ9165/PRO28630Q6UXU0 137 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms