RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 TNFRSF6BO95407 300 aa9.52□□□□□ -0.88
VPS16-202ENST00000380445 OR5A1Q8NGJ0 315 aa9.52□□□□□ -0.88
VPS16-202ENST00000380445 MS4A6AQ9H2W1 248 aa9.52□□□□□ -0.88
VPS16-202ENST00000380445 ZNF702PQ9H963 129 aa9.52□□□□□ -0.88
VPS16-202ENST00000380445 GCN1Q92616 2671 aaKnown RBP9.52□□□□□ -0.88
VPS16-202ENST00000380445 CELSR2Q9HCU4 2923 aa9.52□□□□□ -0.88
VPS16-202ENST00000380445 A6NDN8 102 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 LGALS9O00182 355 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 MED14OSP0DP75 135 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 S100A4P26447 101 aaKnown RBP9.52□□□□□ -0.89
VPS16-202ENST00000380445 C10orf99Q6UWK7 81 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 MYOZ3Q8TDC0 251 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 DCANP1Q8TF63 244 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 ZFHX3Q15911 3703 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 UTP20O75691 2785 aaKnown RBP9.52□□□□□ -0.89
VPS16-202ENST00000380445 A0A096LNJ9 63 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 TEX48A0A1B0GUV7 120 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 GAGE12HA6NDE8 117 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 LINC01546A6NGU7 62 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 H3BVH4 76 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 J3KRW8 73 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 EVI2AP22794 236 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 ASIPP42127 132 aa9.52□□□□□ -0.89
VPS16-202ENST00000380445 CD300EQ496F6 205 aaPredicted RBP9.52□□□□□ -0.89
VPS16-202ENST00000380445 RNASE4P34096 147 aaKnown RBP9.51□□□□□ -0.89
VPS16-202ENST00000380445 RNF152Q8N8N0 203 aa9.51□□□□□ -0.89
VPS16-202ENST00000380445 GEMIN7Q9H840 131 aaKnown RBP9.51□□□□□ -0.89
VPS16-202ENST00000380445 SPCS1Q9Y6A9 102 aa9.51□□□□□ -0.89
VPS16-202ENST00000380445 CR1P17927 2039 aa9.51□□□□□ -0.89
VPS16-202ENST00000380445 F6UB75 175 aa9.51□□□□□ -0.89
VPS16-202ENST00000380445 SRD5A1P18405 259 aa9.51□□□□□ -0.89
VPS16-202ENST00000380445 SNRPD3P62318 126 aaKnown RBP9.51□□□□□ -0.89
VPS16-202ENST00000380445 C2orf91Q6ZV80 131 aa9.51□□□□□ -0.89
VPS16-202ENST00000380445 TSSC4Q9Y5U2 329 aaPredicted RBP9.51□□□□□ -0.89
VPS16-202ENST00000380445 Q6ZQT7 251 aa9.5□□□□□ -0.89
VPS16-202ENST00000380445 PRRC2AP48634 2157 aaKnown RBP9.5□□□□□ -0.89
VPS16-202ENST00000380445 WFDC3Q8IUB2 231 aa9.5□□□□□ -0.89
VPS16-202ENST00000380445 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
VPS16-202ENST00000380445 MCRIP2Q9BUT9 160 aaKnown RBP9.5□□□□□ -0.89
VPS16-202ENST00000380445 COX8AP10176 69 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 DEFB1P60022 68 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 ANXA2RQ3ZCQ2 193 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 MRAP2Q96G30 205 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 PHLDA3Q9Y5J5 127 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 FBN2P35556 2912 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 SYNJ2BPP57105 145 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 LGALS9BQ3B8N2 356 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 TCTEX1D4Q5JR98 221 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 LGALS9CQ6DKI2 356 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 Q8N2B8 174 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 Q8N8P6 123 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 RAB37Q96AX2 223 aa9.49□□□□□ -0.89
VPS16-202ENST00000380445 MAP1AP78559 2803 aaPredicted RBP9.48□□□□□ -0.89
VPS16-202ENST00000380445 A0A1W2PPM0 123 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 KLLNB2CW77 178 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 EDN2P20800 178 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 KIR3DS1Q14943 382 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 ODF3Q96PU9 254 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 USP9YO00507 2555 aaPredicted RBP9.48□□□□□ -0.89
VPS16-202ENST00000380445 IGHV4OR15-8A0A075B7B6 117 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 A0A087WW49 117 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 FCER1GP30273 86 aa9.48□□□□□ -0.89
VPS16-202ENST00000380445 HOXD3P31249 432 aaPredicted RBP9.47□□□□□ -0.89
VPS16-202ENST00000380445 LEPP41159 167 aa9.47□□□□□ -0.89
VPS16-202ENST00000380445 FAM159AQ6UWV7 190 aa9.47□□□□□ -0.89
VPS16-202ENST00000380445 KRTAP1-3Q8IUG1 177 aa9.47□□□□□ -0.89
VPS16-202ENST00000380445 SS18L2Q9UHA2 77 aa9.47□□□□□ -0.89
VPS16-202ENST00000380445 K7EQG2 157 aa9.47□□□□□ -0.89
VPS16-202ENST00000380445 TMEM86BQ8N661 226 aa9.47□□□□□ -0.89
VPS16-202ENST00000380445 DPH3P1Q9H4G8 78 aa9.47□□□□□ -0.89
VPS16-202ENST00000380445 M0R381 172 aa9.46□□□□□ -0.89
VPS16-202ENST00000380445 GAS8-AS1O95177 125 aa9.46□□□□□ -0.89
VPS16-202ENST00000380445 FABP2P12104 132 aa9.46□□□□□ -0.89
VPS16-202ENST00000380445 FXYD7P58549 80 aa9.46□□□□□ -0.89
VPS16-202ENST00000380445 DPF1Q92782 380 aa9.46□□□□□ -0.89
VPS16-202ENST00000380445 J3QR89 54 aa9.46□□□□□ -0.9
VPS16-202ENST00000380445 GATA1P15976 413 aaPredicted RBP9.46□□□□□ -0.9
VPS16-202ENST00000380445 PSMG4Q5JS54 123 aa9.46□□□□□ -0.9
VPS16-202ENST00000380445 NRACQ8N912 160 aa9.46□□□□□ -0.9
VPS16-202ENST00000380445 ZNF688P0C7X2 276 aa9.46□□□□□ -0.9
VPS16-202ENST00000380445 DOPEY2Q9Y3R5 2298 aa9.45□□□□□ -0.9
VPS16-202ENST00000380445 A0A0J9YX75 114 aa9.45□□□□□ -0.9
VPS16-202ENST00000380445 SPATA25Q9BR10 227 aa9.45□□□□□ -0.9
VPS16-202ENST00000380445 IGLV2-18A0A075B6J9 118 aa9.45□□□□□ -0.9
VPS16-202ENST00000380445 GNRH2O43555 120 aa9.45□□□□□ -0.9
VPS16-202ENST00000380445 DUSP14O95147 198 aaKnown RBP9.45□□□□□ -0.9
VPS16-202ENST00000380445 PPP1R17O96001 155 aa9.45□□□□□ -0.9
VPS16-202ENST00000380445 MTURNQ8N3F0 131 aa9.45□□□□□ -0.9
VPS16-202ENST00000380445 RNASE3P12724 160 aaKnown RBP9.44□□□□□ -0.9
VPS16-202ENST00000380445 HERV-K104P63124 156 aa9.44□□□□□ -0.9
VPS16-202ENST00000380445 LAGE3Q14657 143 aa9.44□□□□□ -0.9
VPS16-202ENST00000380445 CSMD2Q7Z408 3487 aa9.44□□□□□ -0.9
VPS16-202ENST00000380445 PTPN13Q12923 2485 aa9.44□□□□□ -0.9
VPS16-202ENST00000380445 POLQO75417 2590 aa9.44□□□□□ -0.9
VPS16-202ENST00000380445 TRAV26-2A0A0B4J265 109 aa9.44□□□□□ -0.9
VPS16-202ENST00000380445 TSPAN13O95857 204 aa9.44□□□□□ -0.9
VPS16-202ENST00000380445 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
VPS16-202ENST00000380445 NAV2Q8IVL1 2488 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms