RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 CEND1Q8N111 149 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 MAPKAPK5-AS1Q8N8E1 139 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 MSRB1Q9NZV6 116 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 ODF1Q14990 250 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 ZNF479Q96JC4 524 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 C11orf21Q9P2W6 132 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 IGKV3D-20A0A0C4DH25 116 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 C9orf139Q6ZV77 190 aa10.61□□□□□ -0.71
MSH5-202ENST00000375740 ZNF462Q96JM2 2506 aa10.6□□□□□ -0.71
MSH5-202ENST00000375740 KRTAP10-9P60411 292 aa10.6□□□□□ -0.71
MSH5-202ENST00000375740 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
MSH5-202ENST00000375740 PRO0461Q9UI25 63 aa10.6□□□□□ -0.71
MSH5-202ENST00000375740 ZFYVE26Q68DK2 2539 aa10.6□□□□□ -0.71
MSH5-202ENST00000375740 RNF223E7ERA6 249 aa10.6□□□□□ -0.71
MSH5-202ENST00000375740 CKS2P33552 79 aa10.6□□□□□ -0.71
MSH5-202ENST00000375740 TM2D2Q9BX73 214 aa10.6□□□□□ -0.71
MSH5-202ENST00000375740 HIGD1BQ9P298 99 aa10.6□□□□□ -0.71
MSH5-202ENST00000375740 J3QLI3 93 aa10.59□□□□□ -0.71
MSH5-202ENST00000375740 J3QR89 54 aa10.59□□□□□ -0.71
MSH5-202ENST00000375740 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
MSH5-202ENST00000375740 Q6ZQT7 251 aa10.59□□□□□ -0.71
MSH5-202ENST00000375740 CSPG4Q6UVK1 2322 aa10.59□□□□□ -0.71
MSH5-202ENST00000375740 PRSS1P07477 247 aa10.59□□□□□ -0.71
MSH5-202ENST00000375740 RPL11P62913 178 aaKnown RBP10.59□□□□□ -0.71
MSH5-202ENST00000375740 C12orf74Q32Q52 190 aa10.59□□□□□ -0.71
MSH5-202ENST00000375740 FBN2P35556 2912 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 SOCS3O14543 225 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 LEPP41159 167 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 CNFNQ9BYD5 112 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 ZMAT4Q9H898 229 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 GAGE13Q4V321 117 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 TCTEX1D4Q5JR98 221 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 MRAP2Q96G30 205 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 RHPN1-AS1Q9BWJ2 59 aa10.58□□□□□ -0.72
MSH5-202ENST00000375740 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
MSH5-202ENST00000375740 IGKV3-7A0A075B6H7 116 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 IGHV7-4-1A0A0J9YVY3 117 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 GATA1P15976 413 aaPredicted RBP10.57□□□□□ -0.72
MSH5-202ENST00000375740 EVI2AP22794 236 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 DEFB1P60022 68 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 C10orf99Q6UWK7 81 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 FOXC2Q99958 501 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 CSMD2Q7Z408 3487 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 FCER1GP30273 86 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 FHL3Q13643 280 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 RNF185Q96GF1 192 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 TMEM160Q9NX00 188 aa10.57□□□□□ -0.72
MSH5-202ENST00000375740 FAM208BQ5VWN6 2430 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 A0A1B0GWB2 263 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 IGKCP01834 107 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 PSMB8P28062 276 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 PRR9Q5T870 116 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 ZNF580Q9UK33 172 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 MT-ATP8P03928 68 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 EDN2P20800 178 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 CDIP1Q9H305 208 aa10.56□□□□□ -0.72
MSH5-202ENST00000375740 J3KRW8 73 aa10.55□□□□□ -0.72
MSH5-202ENST00000375740 OVOL1O14753 267 aa10.55□□□□□ -0.72
MSH5-202ENST00000375740 IGHV4-31P0DP07 118 aa10.55□□□□□ -0.72
MSH5-202ENST00000375740 OR10J6PQ8NGY7 276 aa10.55□□□□□ -0.72
MSH5-202ENST00000375740 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
MSH5-202ENST00000375740 UBR5O95071 2799 aaPredicted RBP10.55□□□□□ -0.72
MSH5-202ENST00000375740 LENEPQ9Y5L5 61 aa10.55□□□□□ -0.72
MSH5-202ENST00000375740 SRD5A1P18405 259 aa10.54□□□□□ -0.72
MSH5-202ENST00000375740 NFE4Q86UQ8 179 aa10.54□□□□□ -0.72
MSH5-202ENST00000375740 POLQO75417 2590 aa10.54□□□□□ -0.72
MSH5-202ENST00000375740 F6UB75 175 aa10.54□□□□□ -0.72
MSH5-202ENST00000375740 SMCPP49901 116 aaPredicted RBP10.54□□□□□ -0.72
MSH5-202ENST00000375740 SFTA2Q6UW10 78 aa10.54□□□□□ -0.72
MSH5-202ENST00000375740 K7EMT4 169 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 APOMO95445 188 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 DEFB113Q30KQ7 82 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
MSH5-202ENST00000375740 MRPL35Q9NZE8 188 aaKnown RBP10.53□□□□□ -0.72
MSH5-202ENST00000375740 CR1P17927 2039 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 FSHBP01225 129 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 FOXI1Q12951 378 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 Q6YL49 198 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 TMEM158Q8WZ71 300 aa10.53□□□□□ -0.72
MSH5-202ENST00000375740 RRN3P1Q2M238 152 aa10.52□□□□□ -0.72
MSH5-202ENST00000375740 PTH2Q96A98 100 aa10.52□□□□□ -0.72
MSH5-202ENST00000375740 HIST1H4GQ99525 98 aa10.52□□□□□ -0.72
MSH5-202ENST00000375740 USP9YO00507 2555 aaPredicted RBP10.52□□□□□ -0.72
MSH5-202ENST00000375740 XGP55808 180 aa10.52□□□□□ -0.73
MSH5-202ENST00000375740 RNF183Q96D59 192 aa10.52□□□□□ -0.73
MSH5-202ENST00000375740 BEX4Q9NWD9 120 aaPredicted RBP10.52□□□□□ -0.73
MSH5-202ENST00000375740 VPREB3Q9UKI3 123 aa10.52□□□□□ -0.73
MSH5-202ENST00000375740 LRRK2Q5S007 2527 aa10.51□□□□□ -0.73
MSH5-202ENST00000375740 TMEM89A2RUT3 159 aa10.51□□□□□ -0.73
MSH5-202ENST00000375740 DPM2O94777 84 aa10.51□□□□□ -0.73
MSH5-202ENST00000375740 MORN3Q6PF18 240 aaPredicted RBP10.51□□□□□ -0.73
MSH5-202ENST00000375740 MAP1LC3AQ9H492 121 aa10.51□□□□□ -0.73
MSH5-202ENST00000375740 TNFRSF6BO95407 300 aa10.51□□□□□ -0.73
MSH5-202ENST00000375740 ZNF418Q8TF45 676 aaPredicted RBP10.51□□□□□ -0.73
MSH5-202ENST00000375740 FAM19A4Q96LR4 140 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms