RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 OR11H2Q8NH07 326 aa10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 SPOCK3Q9BQ16 436 aa10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 GAGE13Q4V321 117 aa10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 SIRPDQ9H106 197 aa10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 IGHV4-39P01824 125 aa10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 EEF1AKMT3Q96AZ1 226 aa10.72□□□□□ -0.69
CLCNKA-202ENST00000375692 NBPF19A0A087WUL8 3843 aa10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 TRAV12-1A0A0B4J245 112 aa10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 LGALS1P09382 135 aaKnown RBP10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 SAA4P35542 130 aa10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 SUMO2P61956 95 aaKnown RBP10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 SFTA2Q6UW10 78 aa10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 NEXN-AS1Q8NBZ9 246 aa10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 HIF1ANQ9NWT6 349 aa10.71□□□□□ -0.69
CLCNKA-202ENST00000375692 MORN3Q6PF18 240 aaPredicted RBP10.71□□□□□ -0.7
CLCNKA-202ENST00000375692 TOMM6Q96B49 74 aa10.71□□□□□ -0.7
CLCNKA-202ENST00000375692 PRO0461Q9UI25 63 aa10.71□□□□□ -0.7
CLCNKA-202ENST00000375692 MGPP08493 103 aa10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 HIST2H2BCQ6DN03 193 aa10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 U3KQE9 123 aa10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 S100A4P26447 101 aaKnown RBP10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 TMEM219Q86XT9 240 aa10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 CCL19Q99731 98 aa10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 PRADC1Q9BSG0 188 aa10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 BPESC1Q9GZL8 116 aa10.7□□□□□ -0.7
CLCNKA-202ENST00000375692 PRSS29PA6NIE9 313 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 HOXA3O43365 443 aaPredicted RBP10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 KRTAP10-9P60411 292 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 ORMDL2Q53FV1 153 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 C2orf66Q6UXQ4 117 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 GLMPQ8WWB7 406 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 BAALCQ8WXS3 180 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 RNF223E7ERA6 249 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 ATP5G2Q06055 141 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 ZFAND2AQ8N6M9 145 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 KLHL30-AS1Q8NEE0 82 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 PGPEP1Q9NXJ5 209 aa10.69□□□□□ -0.7
CLCNKA-202ENST00000375692 TRBV7-1A0A0A6YYK4 115 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 A0A1B0GWB2 263 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 GNRH2O43555 120 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 COX6B1P14854 86 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 SCGB2A2Q13296 93 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 PHLDA3Q9Y5J5 127 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 IGKV3-7A0A075B6H7 116 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 F6UB75 175 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 J3QR89 54 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 TRBV12-3P01733 135 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 PLA2G2AP14555 144 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 SLC25A16P16260 332 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 EMP1P54849 157 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 UNQ9165/PRO28630Q6UXU0 137 aa10.68□□□□□ -0.7
CLCNKA-202ENST00000375692 CENPVL3A0A0U1RRI6 287 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 ZNF815PA8K554 130 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 RNASE4P34096 147 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 UBE2E1P51965 193 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 KLK9Q2XQG4 91 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 GPHB5Q86YW7 130 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 KLK9Q9UKQ9 250 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 APCP25054 2843 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 ANKRD17O75179 2603 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 CIDEAO60543 219 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 DPH3P1Q9H4G8 78 aa10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 GCN1Q92616 2671 aaKnown RBP10.67□□□□□ -0.7
CLCNKA-202ENST00000375692 NAV2Q8IVL1 2488 aa10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 FASNP49327 2511 aaKnown RBP10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 LINC01549A6NIU2 74 aa10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 SCGB1D4Q6XE38 83 aa10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 C20orf78Q9BR46 151 aa10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 DUSP14O95147 198 aaKnown RBP10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 ATP5J2P56134 94 aa10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 CLEC2AQ6UVW9 174 aa10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 SPATA25Q9BR10 227 aa10.66□□□□□ -0.7
CLCNKA-202ENST00000375692 LINC01619G3V211 115 aa10.65□□□□□ -0.7
CLCNKA-202ENST00000375692 ASIPP42127 132 aa10.65□□□□□ -0.7
CLCNKA-202ENST00000375692 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
CLCNKA-202ENST00000375692 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLCNKA-202ENST00000375692 ZFP2Q6ZN57 461 aa10.65□□□□□ -0.7
CLCNKA-202ENST00000375692 TRAV21A0A0B4J279 112 aa10.65□□□□□ -0.71
CLCNKA-202ENST00000375692 SMCPP49901 116 aaPredicted RBP10.65□□□□□ -0.71
CLCNKA-202ENST00000375692 C9orf139Q6ZV77 190 aa10.65□□□□□ -0.71
CLCNKA-202ENST00000375692 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.71
CLCNKA-202ENST00000375692 OR10J6PQ8NGY7 276 aa10.65□□□□□ -0.71
CLCNKA-202ENST00000375692 LOC107984156A0A0G2JMH3 177 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 NDUFS8O00217 210 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 CRYGDP07320 174 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 LMO4P61968 165 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 ARL17AQ8IVW1 177 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 LINC00477Q96M19 166 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 ZANQ9Y493 2812 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 MUC4Q99102 2169 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 J3QKU1 62 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 APOMO95445 188 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 SCGB1A1P11684 91 aa10.64□□□□□ -0.71
CLCNKA-202ENST00000375692 ARL3P36405 182 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms