RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 GAGE6Q13070 117 aa7.35□□□□□ -1.23
LRRC40-201ENST00000370952 LYRM7Q5U5X0 104 aa7.35□□□□□ -1.23
LRRC40-201ENST00000370952 CLEC19AQ6UXS0 136 aa7.35□□□□□ -1.23
LRRC40-201ENST00000370952 OTOGLQ3ZCN5 2332 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 IGHV4-4A0A075B6R2 117 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 CLPSL1A2RUU4 121 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 SCGB2A1O75556 95 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 NHLRC4P0CG21 123 aaPredicted RBP7.34□□□□□ -1.23
LRRC40-201ENST00000370952 S100A4P26447 101 aaKnown RBP7.34□□□□□ -1.23
LRRC40-201ENST00000370952 ARL3P36405 182 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 SLC25A20O43772 301 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 IGHV3-30P01768 117 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 IGHV3-30-5P0DP03 117 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 C10orf126Q8N4M7 172 aa7.34□□□□□ -1.23
LRRC40-201ENST00000370952 IGLV4-69A0A075B6H9 119 aa7.34□□□□□ -1.24
LRRC40-201ENST00000370952 IGHV7-81A0A0B4J1V7 117 aa7.34□□□□□ -1.24
LRRC40-201ENST00000370952 CRLF1O75462 422 aa7.34□□□□□ -1.24
LRRC40-201ENST00000370952 TSHBP01222 138 aa7.34□□□□□ -1.24
LRRC40-201ENST00000370952 RPL39P62891 51 aaKnown RBP7.34□□□□□ -1.24
LRRC40-201ENST00000370952 TMEM170BQ5T4T1 132 aa7.34□□□□□ -1.24
LRRC40-201ENST00000370952 SBSPONQ8IVN8 264 aa7.34□□□□□ -1.24
LRRC40-201ENST00000370952 AKAP6Q13023 2319 aa7.33□□□□□ -1.24
LRRC40-201ENST00000370952 TRAV4A0A0B4J268 109 aa7.33□□□□□ -1.24
LRRC40-201ENST00000370952 DPH3P1Q9H4G8 78 aa7.33□□□□□ -1.24
LRRC40-201ENST00000370952 TP53TG1Q9Y2A0 90 aa7.33□□□□□ -1.24
LRRC40-201ENST00000370952 PHLDA3Q9Y5J5 127 aa7.33□□□□□ -1.24
LRRC40-201ENST00000370952 CITED1Q99966 193 aa7.33□□□□□ -1.24
LRRC40-201ENST00000370952 PRO1854Q9UHT4 67 aa7.33□□□□□ -1.24
LRRC40-201ENST00000370952 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.32□□□□□ -1.24
LRRC40-201ENST00000370952 C9orf47Q6ZRZ4 202 aa7.32□□□□□ -1.24
LRRC40-201ENST00000370952 C16orf92Q96LL3 132 aa7.32□□□□□ -1.24
LRRC40-201ENST00000370952 TLN1Q9Y490 2541 aaKnown RBP7.32□□□□□ -1.24
LRRC40-201ENST00000370952 CCDC179H3BU77 68 aa7.32□□□□□ -1.24
LRRC40-201ENST00000370952 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
LRRC40-201ENST00000370952 HERVK_113P61574 105 aa7.32□□□□□ -1.24
LRRC40-201ENST00000370952 NTN5Q8WTR8 489 aaPredicted RBP7.32□□□□□ -1.24
LRRC40-201ENST00000370952 C20orf173Q96LM9 149 aa7.32□□□□□ -1.24
LRRC40-201ENST00000370952 SPTA1P02549 2419 aa7.32□□□□□ -1.24
LRRC40-201ENST00000370952 RIF1Q5UIP0 2472 aaKnown RBP7.32□□□□□ -1.24
LRRC40-201ENST00000370952 A4D1N5 150 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 B9A039 149 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 TMEM262E9PQX1 116 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 G3V318 75 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 GNRH2O43555 120 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 GAGE2BQ13066 116 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 GAGE2EQ4V326 116 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 VCX2Q9H322 139 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 GAGE2DQ9UEU5 116 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 HRNRQ86YZ3 2850 aaPredicted RBP7.31□□□□□ -1.24
LRRC40-201ENST00000370952 IGHV3-64A0A075B6Q5 118 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 ELANEP08246 267 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 IGFL3Q6UXB1 125 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 C1orf122Q6ZSJ8 110 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 SLC25A29Q8N8R3 303 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 LY6G5BQ8NDX9 201 aa7.31□□□□□ -1.24
LRRC40-201ENST00000370952 BEX4Q9NWD9 120 aaPredicted RBP7.31□□□□□ -1.24
LRRC40-201ENST00000370952 ODF3BA8MYP8 253 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 SNCGO76070 127 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 VMO1Q7Z5L0 202 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 GPHB5Q86YW7 130 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 ZNRF2Q8NHG8 242 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 TIMD4Q96H15 378 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 TTC28Q96AY4 2481 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 PTPRZ1P23471 2315 aaPredicted RBP7.3□□□□□ -1.24
LRRC40-201ENST00000370952 TRAV2A0A0B4J234 112 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 RHODO00212 210 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 ATP6V0E1O15342 81 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 CD3EP07766 207 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 ASIPP42127 132 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 NDUFV3P56181 108 aaKnown RBP7.3□□□□□ -1.24
LRRC40-201ENST00000370952 DEFB123Q8N688 67 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 LINC01560Q8TB33 94 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 METTL26Q96S19 204 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 JPT2Q9H910 190 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 F6UB75 175 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 IGHV4-39P01824 125 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 SRD5A1P18405 259 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 PMVKQ15126 192 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 Q1RN00 199 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 Q8N1Y9 231 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 Q8N6K4 173 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 Q8N9W7 124 aa7.3□□□□□ -1.24
LRRC40-201ENST00000370952 COL6A6A6NMZ7 2263 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 IGKV3-7A0A075B6H7 116 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 J3QQQ9 107 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 RNASE4P34096 147 aaKnown RBP7.29□□□□□ -1.24
LRRC40-201ENST00000370952 ZFAND2AQ8N6M9 145 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 OPRPNQ99935 248 aaPredicted RBP7.29□□□□□ -1.24
LRRC40-201ENST00000370952 TEX49A0A1B0GTD5 131 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 IGIPA6NJ69 53 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 IGHV3-33P01772 117 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 LGALS3P17931 250 aaKnown RBP7.29□□□□□ -1.24
LRRC40-201ENST00000370952 TCF15Q12870 199 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 TTC32Q5I0X7 151 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 FAM110DQ8TAY7 271 aaPredicted RBP7.29□□□□□ -1.24
LRRC40-201ENST00000370952 AMELXQ99217 191 aa7.29□□□□□ -1.24
LRRC40-201ENST00000370952 A0A087WWL8 130 aa7.28□□□□□ -1.24
LRRC40-201ENST00000370952 TRAV21A0A0B4J279 112 aa7.28□□□□□ -1.24
LRRC40-201ENST00000370952 SMIM20Q8N5G0 67 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms