RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 F5P12259 2224 aa0.16□□□□□ -2.38
ECHDC1-201ENST00000368287 PNMA8CA0A1B0GUJ8 204 aa0.16□□□□□ -2.38
ECHDC1-201ENST00000368287 SCTP09683 121 aa0.16□□□□□ -2.38
ECHDC1-201ENST00000368287 MPC1LP0DKB6 136 aa0.16□□□□□ -2.38
ECHDC1-201ENST00000368287 PLGLB1Q02325 96 aa0.16□□□□□ -2.38
ECHDC1-201ENST00000368287 TTC28Q96AY4 2481 aa0.15□□□□□ -2.38
ECHDC1-201ENST00000368287 MYH13Q9UKX3 1938 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 LRP1Q07954 4544 aaKnown RBP0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 HLA-DRB4P13762 266 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 AKR1D1P51857 326 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 SPINK6Q6UWN8 80 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 SNX29P2Q8IUI4 249 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 TCTE3Q8IZS6 198 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 HLA-DRB4X5D2U9 266 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 CDK5RAP2Q96SN8 1893 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 IGF2RP11717 2491 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 PIEZO1Q92508 2521 aa0.15□□□□□ -2.39
ECHDC1-201ENST00000368287 GPR98Q8WXG9 6306 aa0.14□□□□□ -2.39
ECHDC1-201ENST00000368287 OR2H2O95918 312 aa0.14□□□□□ -2.39
ECHDC1-201ENST00000368287 CLLU1Q5K131 121 aa0.14□□□□□ -2.39
ECHDC1-201ENST00000368287 ZFYVE26Q68DK2 2539 aa0.13□□□□□ -2.39
ECHDC1-201ENST00000368287 SMIM24O75264 130 aa0.13□□□□□ -2.39
ECHDC1-201ENST00000368287 SLC25A6P12236 298 aa0.13□□□□□ -2.39
ECHDC1-201ENST00000368287 ELOF1P60002 83 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-201ENST00000368287 LSM2Q9Y333 95 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-201ENST00000368287 ANK2Q01484 3957 aa0.13□□□□□ -2.39
ECHDC1-201ENST00000368287 VIRMAQ69YN4 1812 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-201ENST00000368287 TNS1Q9HBL0 1735 aaKnown RBP0.13□□□□□ -2.39
ECHDC1-201ENST00000368287 ABCA12Q86UK0 2595 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 PTPRMP28827 1452 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 ANKRD30AQ9BXX3 1397 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 PYYP10082 97 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 CCDC153Q494R4 210 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 PPDPFLQ8WWR9 84 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 TMEM141Q96I45 108 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 TAS2R8Q9NYW2 309 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 KDM6BO15054 1643 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 PLXNA1Q9UIW2 1896 aa0.12□□□□□ -2.39
ECHDC1-201ENST00000368287 POLQO75417 2590 aa0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 EMX2Q04743 252 aa0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 OR2T2Q6IF00 324 aa0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 DYNLRB2Q8TF09 96 aa0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 PROK2Q9HC23 129 aa0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 NOP16Q9Y3C1 178 aaKnown RBP0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 PTPRZ1P23471 2315 aaPredicted RBP0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 OTOGQ6ZRI0 2925 aa0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 MYO7AQ13402 2215 aa0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 CCDC171Q6TFL3 1326 aa0.11□□□□□ -2.39
ECHDC1-201ENST00000368287 TEX49A0A1B0GTD5 131 aa0.1□□□□□ -2.39
ECHDC1-201ENST00000368287 DR1Q01658 176 aa0.1□□□□□ -2.39
ECHDC1-201ENST00000368287 AKAP14Q86UN6 197 aa0.1□□□□□ -2.39
ECHDC1-201ENST00000368287 ATP6V0E2Q8NHE4 81 aa0.1□□□□□ -2.39
ECHDC1-201ENST00000368287 IFI27L1Q96BM0 104 aa0.1□□□□□ -2.39
ECHDC1-201ENST00000368287 DSCR8Q96T75 97 aa0.1□□□□□ -2.39
ECHDC1-201ENST00000368287 MYH6P13533 1939 aa0.1□□□□□ -2.39
ECHDC1-201ENST00000368287 ZNF142P52746 1687 aaPredicted RBP0.1□□□□□ -2.39
ECHDC1-201ENST00000368287 A0A087WTM6 91 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 M0R129 80 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 NPC2P61916 151 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 MORN2Q502X0 79 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 ATP11AUNQ6ZP68 121 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 VMO1Q7Z5L0 202 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 ERCC6Q03468 1493 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 MUC22E2RYF6 1773 aaPredicted RBP0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 AKAP11Q9UKA4 1901 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 KIAA0100Q14667 2235 aaKnown RBP0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 F8P00451 2351 aa0.09□□□□□ -2.4
ECHDC1-201ENST00000368287 SYNE2Q8WXH0 6885 aaKnown RBP0.08□□□□□ -2.4
ECHDC1-201ENST00000368287 BORCS7-ASMTA0A0B4J1R7 106 aa0.08□□□□□ -2.4
ECHDC1-201ENST00000368287 ZNF670-ZNF695F2Z2N8 137 aa0.08□□□□□ -2.4
ECHDC1-201ENST00000368287 RBP4P02753 201 aa0.08□□□□□ -2.4
ECHDC1-201ENST00000368287 UHRF1BP1LA0JNW5 1464 aa0.08□□□□□ -2.4
ECHDC1-201ENST00000368287 TRAV2A0A0B4J234 112 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 FAM236AA0A1B0GUQ0 79 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 FAM236BA0A1B0GV22 79 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 M0R2P5 195 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 ARPC5O15511 151 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 APOC1P02654 83 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 DBIP07108 87 aaKnown RBP0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 HIST1H1AQ02539 215 aaPredicted RBP0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 AIF1LQ9BQI0 150 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 COA4Q9NYJ1 87 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 BET1LQ9NYM9 111 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 PHIPQ8WWQ0 1821 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 DOCK11Q5JSL3 2073 aa0.07□□□□□ -2.4
ECHDC1-201ENST00000368287 HRNRQ86YZ3 2850 aaPredicted RBP0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 TRAV12-2A0A075B6T6 113 aa0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 TCRBV3S1A0A5B6 114 aa0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 J3QLW9 94 aa0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 IGLC6P0CF74 106 aa0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 SCGB1A1P11684 91 aa0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 MAGOHBQ96A72 148 aaKnown RBP0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 CADP27708 2225 aa0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 ARFGEF1Q9Y6D6 1849 aa0.06□□□□□ -2.4
ECHDC1-201ENST00000368287 CELSR1Q9NYQ6 3014 aa0.05□□□□□ -2.4
ECHDC1-201ENST00000368287 GVQW2A0A096LPI5 108 aaPredicted RBP0.05□□□□□ -2.4
ECHDC1-201ENST00000368287 MIC13Q5XKP0 118 aa0.05□□□□□ -2.4
ECHDC1-201ENST00000368287 CYP2G1PQ6ZSU1 146 aa0.05□□□□□ -2.4
ECHDC1-201ENST00000368287 VPS25Q9BRG1 176 aa0.05□□□□□ -2.4
ECHDC1-201ENST00000368287 CELSR2Q9HCU4 2923 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms