RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 CSMD3Q7Z407 3707 aa4.9□□□□□ -1.62
RNU1-55P-201ENST00000365510 TRAV9-1A0A075B6T8 112 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 IGHV3-16A0A0C4DH30 117 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 GRIFINA4D1Z8 144 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 SMIM9A6NGZ8 99 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 F2Z2F3 143 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 SPRY2O43597 315 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 OR5AL1P0C617 328 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 DNLZQ5SXM8 178 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 TMEM88Q6PEY1 159 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 ZNF493Q6ZR52 646 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 CBLN2Q8IUK8 224 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 OR11H2Q8NH07 326 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 RNASE8Q8TDE3 154 aaKnown RBP4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 GTSF1Q8WW33 167 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 RNF183Q96D59 192 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 RETNQ9HD89 108 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 PHLDA3Q9Y5J5 127 aa4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 TIMM8BQ9Y5J9 83 aaPredicted RBP4.9□□□□□ -1.63
RNU1-55P-201ENST00000365510 A0A1B0GUT8 65 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 SNURFLB1AK76 121 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 GNRH2O43555 120 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 SNAI2O43623 268 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 SCO1O75880 301 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 ARMS2P0C7Q2 107 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 IGLC6P0CF74 106 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 RNASE3P12724 160 aaKnown RBP4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 MIFP14174 115 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 FOXA3P55318 350 aaPredicted RBP4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 CACNG7P62955 275 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 SPANXN1Q5VSR9 72 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 ATP5L2Q7Z4Y8 100 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 ZFP82Q8N141 532 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 SYT8Q8NBV8 401 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 NUP35Q8NFH5 326 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 PGLYRP4Q96LB8 373 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 C9orf85Q96MD7 179 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 SPATA25Q9BR10 227 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 SCRT2Q9NQ03 307 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 MDFICQ9P1T7 246 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 TP53TG3Q9ULZ0 132 aa4.89□□□□□ -1.63
RNU1-55P-201ENST00000365510 A0A1B0GW15 77 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 M0R2P5 195 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 M0R381 172 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 S100A8P05109 93 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 HBBP68871 147 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 RIGQ13278 110 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 LYZL1Q6UWQ5 148 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 C11orf72Q8NBR9 251 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 OR10AG1Q8NH19 301 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 AP1S3Q96PC3 154 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 SPXQ9BT56 116 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 SSBP4Q9BWG4 385 aaPredicted RBP4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 CNFNQ9BYD5 112 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 ZMAT4Q9H898 229 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 EDA2RQ9HAV5 297 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 GSN-AS1Q9NRJ2 163 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 X6R8D5 127 aa4.88□□□□□ -1.63
RNU1-55P-201ENST00000365510 TRBV24-1A0A075B6N3 115 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 IGHV4-28A0A0C4DH34 117 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 TEX48A0A1B0GUV7 120 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 SPINK4O60575 86 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 NXPH4O95158 308 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 PRM2P04554 102 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 TRGC1P0CF51 173 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 AZU1P20160 251 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 EMP1P54849 157 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 DAZ2Q13117 558 aaKnown RBP4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 ELOBQ15370 118 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 TWIST1Q15672 202 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 MRPL54Q6P161 138 aaKnown RBP4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 WDR73Q6P4I2 378 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 RASL11AQ6T310 242 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 SMIM15Q7Z3B0 74 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 ZNF575Q86XF7 245 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 Q8NAQ8 132 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 IL17DQ8TAD2 202 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 TM2D3Q9BRN9 247 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 OVOL2Q9BRP0 275 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 NDUFAF3Q9BU61 184 aa4.87□□□□□ -1.63
RNU1-55P-201ENST00000365510 IGHV4-4A0A075B6R2 117 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 TRGV1A0A0A0MS02 117 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 TGIF2-C20orf24A0A0A6YYL0 155 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 MUC21A0A0G2JKD1 596 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 MUC21A0A140T8X8 626 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 PLAC8L1A1L4L8 177 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 LYRM9A8MSI8 78 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 RAB4BP61018 213 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 SSTP61278 116 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 LGALS9BQ3B8N2 356 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 COX19Q49B96 90 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 PIK3CD-AS1Q5SR53 167 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 FAM210BQ96KR6 192 aa4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 C11orf68Q9H3H3 251 aaKnown RBP4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 NOP10Q9NPE3 64 aaKnown RBP4.86□□□□□ -1.63
RNU1-55P-201ENST00000365510 A0A1B0GXF2 115 aa4.85□□□□□ -1.63
RNU1-55P-201ENST00000365510 A8MWV9 139 aa4.85□□□□□ -1.63
RNU1-55P-201ENST00000365510 MT-ND6P03923 174 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms