RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 Q71RC1 249 aaPredicted RBP10.82□□□□□ -0.68
COL6A1-201ENST00000361866 C8orf31Q8N9H6 132 aa10.82□□□□□ -0.68
COL6A1-201ENST00000361866 SZT2Q5T011 3432 aa10.81□□□□□ -0.68
COL6A1-201ENST00000361866 IGLV11-55A0A075B6I3 123 aa10.81□□□□□ -0.68
COL6A1-201ENST00000361866 CRIP1P50238 77 aa10.81□□□□□ -0.68
COL6A1-201ENST00000361866 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
COL6A1-201ENST00000361866 GNLYP22749 145 aa10.81□□□□□ -0.68
COL6A1-201ENST00000361866 ODF1Q14990 250 aa10.81□□□□□ -0.68
COL6A1-201ENST00000361866 PHLDA1Q8WV24 401 aaPredicted RBP10.81□□□□□ -0.68
COL6A1-201ENST00000361866 TRANK1O15050 2925 aa10.81□□□□□ -0.68
COL6A1-201ENST00000361866 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
COL6A1-201ENST00000361866 DNAL4O96015 105 aa10.8□□□□□ -0.68
COL6A1-201ENST00000361866 RRN3P1Q2M238 152 aa10.8□□□□□ -0.68
COL6A1-201ENST00000361866 URB1-AS1Q96HZ7 61 aa10.8□□□□□ -0.68
COL6A1-201ENST00000361866 RNASE13Q5GAN3 156 aaKnown RBP10.8□□□□□ -0.68
COL6A1-201ENST00000361866 FANCD2OSQ96PS1 177 aa10.8□□□□□ -0.68
COL6A1-201ENST00000361866 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 M0R2P5 195 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 IGKV2D-26A0A0A0MRZ7 120 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 C2orf82Q6UX34 121 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 TET2Q6N021 2002 aaPredicted RBP10.79□□□□□ -0.68
COL6A1-201ENST00000361866 BUB3O43684 328 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 PMVKQ15126 192 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 FOXI2Q6ZQN5 318 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 UBE2E1P51965 193 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 CRYBA4P53673 196 aa10.79□□□□□ -0.68
COL6A1-201ENST00000361866 TRAV8-3A0A0A6YYJ7 113 aa10.78□□□□□ -0.68
COL6A1-201ENST00000361866 MYCNOSP40205 109 aa10.78□□□□□ -0.68
COL6A1-201ENST00000361866 HIVEP2P31629 2446 aa10.78□□□□□ -0.68
COL6A1-201ENST00000361866 A0A1W2PRX2 142 aa10.78□□□□□ -0.68
COL6A1-201ENST00000361866 FGF6P10767 208 aa10.78□□□□□ -0.68
COL6A1-201ENST00000361866 DAZ1Q9NQZ3 744 aaKnown RBP10.78□□□□□ -0.68
COL6A1-201ENST00000361866 EXPH5Q8NEV8 1989 aa10.78□□□□□ -0.68
COL6A1-201ENST00000361866 G3V4G9 280 aa10.78□□□□□ -0.68
COL6A1-201ENST00000361866 SYNJ2BPP57105 145 aa10.77□□□□□ -0.68
COL6A1-201ENST00000361866 SMIM20Q8N5G0 67 aa10.77□□□□□ -0.68
COL6A1-201ENST00000361866 DUSP14O95147 198 aaKnown RBP10.77□□□□□ -0.69
COL6A1-201ENST00000361866 PTH2Q96A98 100 aa10.77□□□□□ -0.69
COL6A1-201ENST00000361866 LINC00574Q9H8X3 128 aa10.77□□□□□ -0.69
COL6A1-201ENST00000361866 FREM2Q5SZK8 3169 aa10.77□□□□□ -0.69
COL6A1-201ENST00000361866 WI2-2373I1.2A0A1W2PRP0 233 aa10.76□□□□□ -0.69
COL6A1-201ENST00000361866 IGHV3-53P01767 116 aa10.76□□□□□ -0.69
COL6A1-201ENST00000361866 TIMM21Q9BVV7 248 aa10.76□□□□□ -0.69
COL6A1-201ENST00000361866 TRBV20-1A0A075B6N2 111 aa10.76□□□□□ -0.69
COL6A1-201ENST00000361866 C2orf91Q6ZV80 131 aa10.76□□□□□ -0.69
COL6A1-201ENST00000361866 PPDPFLQ8WWR9 84 aa10.76□□□□□ -0.69
COL6A1-201ENST00000361866 GAS8-AS1O95177 125 aa10.76□□□□□ -0.69
COL6A1-201ENST00000361866 PRO1854Q9UHT4 67 aa10.76□□□□□ -0.69
COL6A1-201ENST00000361866 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
COL6A1-201ENST00000361866 J3QQQ9 107 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 OR11H6Q8NGC7 330 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 IGHV3-16A0A0C4DH30 117 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 TRBV7-9A0A0J9YWB2 115 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 IGLV2-11P01706 119 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 RPL39P62891 51 aaKnown RBP10.75□□□□□ -0.69
COL6A1-201ENST00000361866 MAPK1IP1LQ8NDC0 245 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 TRAV13-1A0A0B4J241 112 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 CLUHP3Q96NS8 147 aa10.75□□□□□ -0.69
COL6A1-201ENST00000361866 TAL2Q16559 108 aa10.74□□□□□ -0.69
COL6A1-201ENST00000361866 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
COL6A1-201ENST00000361866 ZNF493Q6ZR52 646 aa10.74□□□□□ -0.69
COL6A1-201ENST00000361866 FN1P02751 2386 aaKnown RBP10.73□□□□□ -0.69
COL6A1-201ENST00000361866 FAM223BA6NKX1 122 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 FAM223AQ8IWN6 122 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 Q8N9W7 124 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 TRGV2A0A075B6R0 118 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 SLC25A20O43772 301 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 GAGE5Q13069 117 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 GAGE6Q13070 117 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 ATXN8Q156A1 80 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 NTN5Q8WTR8 489 aaPredicted RBP10.73□□□□□ -0.69
COL6A1-201ENST00000361866 USMG5Q96IX5 58 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 UBE2E2Q96LR5 201 aa10.73□□□□□ -0.69
COL6A1-201ENST00000361866 TRGV11A0A075B6L2 103 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 PKD1L2Q7Z442 2459 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 NBEAQ8NFP9 2946 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 LINC01548A6NM66 108 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 DEFB131AP59861 70 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 ABCA12Q86UK0 2595 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 HOXB4P17483 251 aaPredicted RBP10.72□□□□□ -0.69
COL6A1-201ENST00000361866 NPBQ8NG41 125 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 JPT2Q9H910 190 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 AGRNO00468 2067 aa10.72□□□□□ -0.69
COL6A1-201ENST00000361866 LY6G5BQ8NDX9 201 aa10.71□□□□□ -0.69
COL6A1-201ENST00000361866 MAPKAPK5-AS1Q8N8E1 139 aa10.71□□□□□ -0.69
COL6A1-201ENST00000361866 GAGE12JA6NER3 117 aa10.71□□□□□ -0.7
COL6A1-201ENST00000361866 GAGE7O76087 117 aa10.71□□□□□ -0.7
COL6A1-201ENST00000361866 GAGE12FP0CL80 117 aa10.71□□□□□ -0.7
COL6A1-201ENST00000361866 GAGE12GP0CL81 117 aa10.71□□□□□ -0.7
COL6A1-201ENST00000361866 GAGE12IP0CL82 117 aa10.71□□□□□ -0.7
COL6A1-201ENST00000361866 GAGE4Q13068 117 aa10.71□□□□□ -0.7
COL6A1-201ENST00000361866 HIGD1BQ9P298 99 aa10.71□□□□□ -0.7
COL6A1-201ENST00000361866 IGF1P05019 195 aa10.7□□□□□ -0.7
COL6A1-201ENST00000361866 ZFP36P26651 326 aaKnown RBP10.7□□□□□ -0.7
COL6A1-201ENST00000361866 SPAG8Q99932 426 aaPredicted RBP10.7□□□□□ -0.7
COL6A1-201ENST00000361866 CENPVL3A0A0U1RRI6 287 aa10.7□□□□□ -0.7
COL6A1-201ENST00000361866 BLCAPP62952 87 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms