RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 ZNF876PQ49A33 203 aa12.66□□□□□ -0.38
CLK2-202ENST00000361168 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
CLK2-202ENST00000361168 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
CLK2-202ENST00000361168 RPP21Q9H633 154 aaKnown RBP12.66□□□□□ -0.38
CLK2-202ENST00000361168 F8W036 122 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 M0R2P5 195 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 IGHV3-53P01767 116 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 FAM231DQ6ZW35 169 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 OR10AG1Q8NH19 301 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 MUC7Q8TAX7 377 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 GTSF1Q8WW33 167 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 RASL10AQ92737 203 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 JPT2Q9H910 190 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 SCRT2Q9NQ03 307 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 BIN3Q9NQY0 253 aa12.65□□□□□ -0.38
CLK2-202ENST00000361168 DNLZQ5SXM8 178 aa12.64□□□□□ -0.39
CLK2-202ENST00000361168 PHLDA1Q8WV24 401 aaPredicted RBP12.64□□□□□ -0.39
CLK2-202ENST00000361168 SFRP2Q96HF1 295 aa12.64□□□□□ -0.39
CLK2-202ENST00000361168 SPXQ9BT56 116 aa12.64□□□□□ -0.39
CLK2-202ENST00000361168 TRGV2A0A075B6R0 118 aa12.64□□□□□ -0.39
CLK2-202ENST00000361168 M0R381 172 aa12.64□□□□□ -0.39
CLK2-202ENST00000361168 V9GYV3 84 aa12.64□□□□□ -0.39
CLK2-202ENST00000361168 GATCO43716 136 aaKnown RBP12.63□□□□□ -0.39
CLK2-202ENST00000361168 IGLC6P0CF74 106 aa12.63□□□□□ -0.39
CLK2-202ENST00000361168 HOXA5P20719 270 aa12.63□□□□□ -0.39
CLK2-202ENST00000361168 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
CLK2-202ENST00000361168 SSBP4Q9BWG4 385 aaPredicted RBP12.63□□□□□ -0.39
CLK2-202ENST00000361168 ZNF479Q96JC4 524 aa12.62□□□□□ -0.39
CLK2-202ENST00000361168 OSTCQ9NRP0 149 aa12.62□□□□□ -0.39
CLK2-202ENST00000361168 PHLDA3Q9Y5J5 127 aa12.62□□□□□ -0.39
CLK2-202ENST00000361168 MSRB1Q9NZV6 116 aa12.62□□□□□ -0.39
CLK2-202ENST00000361168 DEFB131BA0A096LNP1 70 aa12.61□□□□□ -0.39
CLK2-202ENST00000361168 SNAI2O43623 268 aa12.61□□□□□ -0.39
CLK2-202ENST00000361168 FER1L6-AS1Q8NA97 138 aa12.61□□□□□ -0.39
CLK2-202ENST00000361168 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
CLK2-202ENST00000361168 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
CLK2-202ENST00000361168 TEX48A0A1B0GUV7 120 aa12.6□□□□□ -0.39
CLK2-202ENST00000361168 LYZL1Q6UWQ5 148 aa12.6□□□□□ -0.39
CLK2-202ENST00000361168 OR10G8Q8NGN5 311 aa12.6□□□□□ -0.39
CLK2-202ENST00000361168 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
CLK2-202ENST00000361168 IGHV3-73A0A0B4J1V6 119 aa12.6□□□□□ -0.39
CLK2-202ENST00000361168 CXCL1P09341 107 aa12.6□□□□□ -0.39
CLK2-202ENST00000361168 OR5AL1P0C617 328 aa12.6□□□□□ -0.39
CLK2-202ENST00000361168 F5H768 121 aa12.59□□□□□ -0.39
CLK2-202ENST00000361168 ATP5G1P05496 136 aa12.59□□□□□ -0.39
CLK2-202ENST00000361168 C10orf91Q5T1B1 145 aa12.59□□□□□ -0.39
CLK2-202ENST00000361168 CFAP126Q5VTH2 177 aa12.59□□□□□ -0.39
CLK2-202ENST00000361168 RPS20P60866 119 aaKnown RBP12.58□□□□□ -0.39
CLK2-202ENST00000361168 RNF212Q495C1 297 aa12.58□□□□□ -0.39
CLK2-202ENST00000361168 CASC10Q5T4H9 136 aa12.58□□□□□ -0.39
CLK2-202ENST00000361168 TRAV10A0A0B4J240 114 aa12.58□□□□□ -0.4
CLK2-202ENST00000361168 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
CLK2-202ENST00000361168 PGLYRP4Q96LB8 373 aa12.58□□□□□ -0.4
CLK2-202ENST00000361168 C18orf15Q96N68 181 aa12.58□□□□□ -0.4
CLK2-202ENST00000361168 A0A087WWL8 130 aa12.57□□□□□ -0.4
CLK2-202ENST00000361168 XKRY2A2RUG3 117 aa12.57□□□□□ -0.4
CLK2-202ENST00000361168 HIGD1CA8MV81 97 aa12.57□□□□□ -0.4
CLK2-202ENST00000361168 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
CLK2-202ENST00000361168 CEMP1Q6PRD7 247 aaPredicted RBP12.57□□□□□ -0.4
CLK2-202ENST00000361168 TSKUQ8WUA8 353 aa12.57□□□□□ -0.4
CLK2-202ENST00000361168 A8MWL6 223 aa12.56□□□□□ -0.4
CLK2-202ENST00000361168 MED14OSP0DP75 135 aa12.56□□□□□ -0.4
CLK2-202ENST00000361168 PNRC1Q12796 327 aaPredicted RBP12.56□□□□□ -0.4
CLK2-202ENST00000361168 CT83Q5H943 113 aa12.56□□□□□ -0.4
CLK2-202ENST00000361168 OR4C5Q8NGB2 326 aa12.56□□□□□ -0.4
CLK2-202ENST00000361168 KMT2CQ8NEZ4 4911 aaKnown RBP12.56□□□□□ -0.4
CLK2-202ENST00000361168 IGLL5B9A064 214 aa12.56□□□□□ -0.4
CLK2-202ENST00000361168 NTF3P20783 257 aa12.56□□□□□ -0.4
CLK2-202ENST00000361168 FHL2Q14192 279 aa12.56□□□□□ -0.4
CLK2-202ENST00000361168 Q6ZSN1 163 aa12.56□□□□□ -0.4
CLK2-202ENST00000361168 A0A0J9YY99 117 aa12.55□□□□□ -0.4
CLK2-202ENST00000361168 RS1O15537 224 aa12.55□□□□□ -0.4
CLK2-202ENST00000361168 NXPH4O95158 308 aa12.55□□□□□ -0.4
CLK2-202ENST00000361168 CTRLP40313 264 aa12.55□□□□□ -0.4
CLK2-202ENST00000361168 FAM74A4Q5TZK3 123 aa12.55□□□□□ -0.4
CLK2-202ENST00000361168 TMEM88Q6PEY1 159 aa12.55□□□□□ -0.4
CLK2-202ENST00000361168 ZFP82Q8N141 532 aa12.55□□□□□ -0.4
CLK2-202ENST00000361168 PTH2Q96A98 100 aa12.55□□□□□ -0.4
CLK2-202ENST00000361168 CARHSP1Q9Y2V2 147 aaKnown RBP12.55□□□□□ -0.4
CLK2-202ENST00000361168 TRAV26-1A0A087WT03 109 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 A0A1W2PPQ1 181 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 CRYGDP07320 174 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 Q9UF83 564 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 APOC3P02656 99 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 FOXA3P55318 350 aaPredicted RBP12.54□□□□□ -0.4
CLK2-202ENST00000361168 UFSP1Q6NVU6 142 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 SYT8Q8NBV8 401 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 NUP35Q8NFH5 326 aa12.54□□□□□ -0.4
CLK2-202ENST00000361168 C14orf178Q8N769 122 aaPredicted RBP12.53□□□□□ -0.4
CLK2-202ENST00000361168 VSIG2Q96IQ7 327 aa12.53□□□□□ -0.4
CLK2-202ENST00000361168 SMIM27A0A1W2PRY6 76 aa12.52□□□□□ -0.4
CLK2-202ENST00000361168 F2Z2F3 143 aa12.52□□□□□ -0.4
CLK2-202ENST00000361168 EVI2AP22794 236 aa12.52□□□□□ -0.4
CLK2-202ENST00000361168 CNFNQ9BYD5 112 aa12.52□□□□□ -0.4
CLK2-202ENST00000361168 IGHV4-4A0A075B6R2 117 aa12.52□□□□□ -0.41
CLK2-202ENST00000361168 NUPR2A6NF83 97 aa12.52□□□□□ -0.41
CLK2-202ENST00000361168 TWIST1Q15672 202 aa12.52□□□□□ -0.41
CLK2-202ENST00000361168 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.41
CLK2-202ENST00000361168 HHLA3Q9XRX5 114 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms