RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 PHLDA3Q9Y5J5 127 aa11.37□□□□□ -0.59
CTSA-202ENST00000354880 LOC102724200A0A096LPH7 203 aaPredicted RBP11.36□□□□□ -0.59
CTSA-202ENST00000354880 RAB5BP61020 215 aa11.36□□□□□ -0.59
CTSA-202ENST00000354880 CACNG7P62955 275 aa11.36□□□□□ -0.59
CTSA-202ENST00000354880 MSRB1Q9NZV6 116 aa11.36□□□□□ -0.59
CTSA-202ENST00000354880 MDFICQ9P1T7 246 aa11.36□□□□□ -0.59
CTSA-202ENST00000354880 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 RIPPLY3P57055 190 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 SAMD5Q5TGI4 173 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 CSNK1G2-AS1Q8NCQ2 148 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 GOLT1BQ9Y3E0 138 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 SPRY2O43597 315 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 PRM2P04554 102 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 ZFP82Q8N141 532 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 GATD1Q8NB37 220 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 C9orf85Q96MD7 179 aa11.35□□□□□ -0.59
CTSA-202ENST00000354880 MUC4Q99102 2169 aa11.34□□□□□ -0.59
CTSA-202ENST00000354880 APCSP02743 223 aa11.34□□□□□ -0.59
CTSA-202ENST00000354880 IGHV4-30-4P0DP06 118 aa11.34□□□□□ -0.59
CTSA-202ENST00000354880 SLAQ13239 276 aa11.34□□□□□ -0.59
CTSA-202ENST00000354880 ZNF493Q6ZR52 646 aa11.34□□□□□ -0.59
CTSA-202ENST00000354880 KIR2DL5BA0A0G2JN68 375 aa11.33□□□□□ -0.6
CTSA-202ENST00000354880 KIR2DL5BA0A0G2JPC4 375 aa11.33□□□□□ -0.6
CTSA-202ENST00000354880 M0R381 172 aa11.33□□□□□ -0.6
CTSA-202ENST00000354880 KIR2DL5AQ8N109 375 aa11.33□□□□□ -0.6
CTSA-202ENST00000354880 KIR2DL5BQ8NHK3 375 aa11.33□□□□□ -0.6
CTSA-202ENST00000354880 TRGC1P0CF51 173 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 APOC4P55056 127 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 TMEM191AQ9H0A3 160 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 NOTCH1P46531 2555 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 NBEAL1Q6ZS30 2694 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BKO60814 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BJP06899 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BOP23527 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BBP33778 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BDP58876 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BCP62807 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 ZNF415Q09FC8 603 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST2H2BEQ16778 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.32□□□□□ -0.6
CTSA-202ENST00000354880 ZNF705AQ6ZN79 300 aaPredicted RBP11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BHQ93079 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BNQ99877 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 HIST1H2BMQ99879 126 aa11.32□□□□□ -0.6
CTSA-202ENST00000354880 NXPH4O95158 308 aa11.31□□□□□ -0.6
CTSA-202ENST00000354880 KIAA1644Q3SXP7 199 aa11.31□□□□□ -0.6
CTSA-202ENST00000354880 DMRTA1Q5VZB9 504 aa11.31□□□□□ -0.6
CTSA-202ENST00000354880 SMIM15Q7Z3B0 74 aa11.31□□□□□ -0.6
CTSA-202ENST00000354880 MGAM2Q2M2H8 2515 aa11.31□□□□□ -0.6
CTSA-202ENST00000354880 AZU1P20160 251 aa11.3□□□□□ -0.6
CTSA-202ENST00000354880 C11orf72Q8NBR9 251 aa11.3□□□□□ -0.6
CTSA-202ENST00000354880 GSN-AS1Q9NRJ2 163 aa11.3□□□□□ -0.6
CTSA-202ENST00000354880 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
CTSA-202ENST00000354880 EVI2AP22794 236 aa11.3□□□□□ -0.6
CTSA-202ENST00000354880 FAM104BQ5XKR9 115 aa11.3□□□□□ -0.6
CTSA-202ENST00000354880 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
CTSA-202ENST00000354880 SYT8Q8NBV8 401 aa11.29□□□□□ -0.6
CTSA-202ENST00000354880 RNASE8Q8TDE3 154 aaKnown RBP11.29□□□□□ -0.6
CTSA-202ENST00000354880 TMEM263Q8WUH6 116 aaKnown RBP11.29□□□□□ -0.6
CTSA-202ENST00000354880 RCHY1Q96PM5 261 aa11.29□□□□□ -0.6
CTSA-202ENST00000354880 A8MZ25 164 aa11.28□□□□□ -0.6
CTSA-202ENST00000354880 AP1S3Q96PC3 154 aa11.28□□□□□ -0.6
CTSA-202ENST00000354880 SPXQ9BT56 116 aa11.28□□□□□ -0.6
CTSA-202ENST00000354880 RRN3P1Q2M238 152 aa11.28□□□□□ -0.6
CTSA-202ENST00000354880 ZNF876PQ49A33 203 aa11.28□□□□□ -0.6
CTSA-202ENST00000354880 DNHD1Q96M86 4753 aa11.27□□□□□ -0.61
CTSA-202ENST00000354880 M0R2P5 195 aa11.27□□□□□ -0.61
CTSA-202ENST00000354880 UBE2CO00762 179 aa11.27□□□□□ -0.61
CTSA-202ENST00000354880 SRIP30626 198 aa11.27□□□□□ -0.61
CTSA-202ENST00000354880 C16orf74Q96GX8 76 aa11.27□□□□□ -0.61
CTSA-202ENST00000354880 S100A6P06703 90 aa11.26□□□□□ -0.61
CTSA-202ENST00000354880 RAB4AP20338 218 aa11.26□□□□□ -0.61
CTSA-202ENST00000354880 DEFB135Q30KP9 77 aa11.26□□□□□ -0.61
CTSA-202ENST00000354880 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
CTSA-202ENST00000354880 RNF185Q96GF1 192 aa11.26□□□□□ -0.61
CTSA-202ENST00000354880 MRPL51Q4U2R6 128 aaKnown RBP11.25□□□□□ -0.61
CTSA-202ENST00000354880 IL17DQ8TAD2 202 aa11.25□□□□□ -0.61
CTSA-202ENST00000354880 PTH2Q96A98 100 aa11.25□□□□□ -0.61
CTSA-202ENST00000354880 ALKBH7Q9BT30 221 aaPredicted RBP11.25□□□□□ -0.61
CTSA-202ENST00000354880 DPH3P1Q9H4G8 78 aa11.25□□□□□ -0.61
CTSA-202ENST00000354880 JPT2Q9H910 190 aa11.25□□□□□ -0.61
CTSA-202ENST00000354880 SMIM17P0DL12 118 aa11.25□□□□□ -0.61
CTSA-202ENST00000354880 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
CTSA-202ENST00000354880 D6R8Y8 96 aa11.24□□□□□ -0.61
CTSA-202ENST00000354880 NDUFA6P56556 154 aa11.24□□□□□ -0.61
CTSA-202ENST00000354880 PLAC8L1A1L4L8 177 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 SMIM9A6NGZ8 99 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 CKS2P33552 79 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 KRTAP21-3Q3LHN1 58 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 KPRPQ5T749 579 aaPredicted RBP11.23□□□□□ -0.61
CTSA-202ENST00000354880 Q6ZWC4 215 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 KIF25-AS1Q9Y6Z4 181 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 X6R8D5 127 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 RASL10AQ92737 203 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 U3KQK5 164 aa11.23□□□□□ -0.61
CTSA-202ENST00000354880 A0A087WWL8 130 aa11.22□□□□□ -0.61
CTSA-202ENST00000354880 PPBPP02775 128 aa11.22□□□□□ -0.61
CTSA-202ENST00000354880 DAZ2Q13117 558 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms