RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 RPL11P62913 178 aaKnown RBP5.85□□□□□ -1.47
BRCA1-201ENST00000352993 C16orf92Q96LL3 132 aa5.85□□□□□ -1.47
BRCA1-201ENST00000352993 LOC400499M0QZD8 3231 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 CTSGP08311 255 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 SRSF2Q01130 221 aaKnown RBP5.84□□□□□ -1.47
BRCA1-201ENST00000352993 ATXN8Q156A1 80 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 C2orf82Q6UX34 121 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 ASPMQ8IZT6 3477 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 IGHV7-4-1A0A0J9YVY3 117 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 H3BMM0 161 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 IGHV3-30P01768 117 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 IGHV3-30-5P0DP03 117 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 COX8CQ7Z4L0 72 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 FAM57AQ8TBR7 257 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 RNASE6Q93091 150 aaKnown RBP5.84□□□□□ -1.47
BRCA1-201ENST00000352993 UBE2WQ96B02 151 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 CHCHD5Q9BSY4 110 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 DPH3P1Q9H4G8 78 aa5.84□□□□□ -1.47
BRCA1-201ENST00000352993 IGLV11-55A0A075B6I3 123 aa5.84□□□□□ -1.48
BRCA1-201ENST00000352993 RPL39P62891 51 aaKnown RBP5.84□□□□□ -1.48
BRCA1-201ENST00000352993 NDPQ00604 133 aa5.84□□□□□ -1.48
BRCA1-201ENST00000352993 FOXC1Q12948 553 aa5.84□□□□□ -1.48
BRCA1-201ENST00000352993 LINC01620Q4KN68 170 aa5.84□□□□□ -1.48
BRCA1-201ENST00000352993 OR10J6PQ8NGY7 276 aa5.84□□□□□ -1.48
BRCA1-201ENST00000352993 DPM3Q9P2X0 92 aa5.84□□□□□ -1.48
BRCA1-201ENST00000352993 EP300Q09472 2414 aaPredicted RBP5.84□□□□□ -1.48
BRCA1-201ENST00000352993 APC2O95996 2303 aa5.84□□□□□ -1.48
BRCA1-201ENST00000352993 J3QQQ9 107 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 PAPPA-AS1Q5QFB9 102 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 CLEC19AQ6UXS0 136 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 FAM215AQ9Y5M1 114 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 KALRNO60229 2985 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 CD59P13987 128 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 NPC2P61916 151 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 PMVKQ15126 192 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 ZNF256Q9Y2P7 627 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-201ENST00000352993 SPTBN2O15020 2390 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 IGF1P05019 195 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 COX6B1P14854 86 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 TSPEAR-AS2P59090 65 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 C15orf32Q32M92 178 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 MUSTN1Q8IVN3 82 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 SLC25A29Q8N8R3 303 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 NUP37Q8NFH4 326 aa5.83□□□□□ -1.48
BRCA1-201ENST00000352993 TNFRSF13BO14836 293 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-201ENST00000352993 DUX3Q96PT4 197 aa5.82□□□□□ -1.48
BRCA1-201ENST00000352993 RNF5Q99942 180 aa5.82□□□□□ -1.48
BRCA1-201ENST00000352993 ADARB2-AS1A8MUL3 147 aa5.82□□□□□ -1.48
BRCA1-201ENST00000352993 F8W735 103 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-201ENST00000352993 IGHV3-33P01772 117 aa5.82□□□□□ -1.48
BRCA1-201ENST00000352993 FAM74A4Q5TZK3 123 aa5.82□□□□□ -1.48
BRCA1-201ENST00000352993 SBSPONQ8IVN8 264 aa5.82□□□□□ -1.48
BRCA1-201ENST00000352993 RNASE4P34096 147 aaKnown RBP5.81□□□□□ -1.48
BRCA1-201ENST00000352993 DEFB1P60022 68 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 METTL26Q96S19 204 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 PIP4P1Q86T03 277 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 BOD1L1Q8NFC6 3051 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 ACACAQ13085 2346 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 A0A087WWL8 130 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 GNRH2O43555 120 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 BUB3O43684 328 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 ELANEP08246 267 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 RPL13AP40429 203 aaKnown RBP5.81□□□□□ -1.48
BRCA1-201ENST00000352993 MSRB2Q9Y3D2 182 aa5.81□□□□□ -1.48
BRCA1-201ENST00000352993 CENPVL3A0A0U1RRI6 287 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 CRYGDP07320 174 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 COX6CP09669 75 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 ID1P41134 155 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 OPRPNQ99935 248 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-201ENST00000352993 YAE1D1Q9NRH1 226 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 KAAG1Q9UBP8 84 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 TACC2O95359 2948 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 RBAKDNA6NC62 111 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 PRR9Q5T870 116 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 ODF3Q96PU9 254 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 IGLV4-69A0A075B6H9 119 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 ZZEF1O43149 2961 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 PPDPFQ9H3Y8 114 aa5.8□□□□□ -1.48
BRCA1-201ENST00000352993 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-201ENST00000352993 TRAV21A0A0B4J279 112 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 LY6HO94772 140 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 TMEM95Q3KNT9 176 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 ZNF672Q499Z4 452 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-201ENST00000352993 NBASA2RRP1 2371 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 TRAV8-3A0A0A6YYJ7 113 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 PPP1R17O96001 155 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 PSMG3-AS1Q96PY0 264 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 C9orf153Q5TBE3 101 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 ZNRF2Q8NHG8 242 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 TMEM263Q8WUH6 116 aaKnown RBP5.79□□□□□ -1.48
BRCA1-201ENST00000352993 CLEC2BQ92478 149 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 JPT2Q9H910 190 aa5.79□□□□□ -1.48
BRCA1-201ENST00000352993 TRAV12-3A0A0B4J271 114 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 FAM236AA0A1B0GUQ0 79 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 FAM236BA0A1B0GV22 79 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 LGALS9O00182 355 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 TRIAP1O43715 76 aa5.78□□□□□ -1.48
BRCA1-201ENST00000352993 SPXQ9BT56 116 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms