RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 MRAP2Q96G30 205 aa15.21■□□□□ 0.02
CHRNA3-202ENST00000348639 DUX3Q96PT4 197 aa15.21■□□□□ 0.02
CHRNA3-202ENST00000348639 MCRIP2Q9BUT9 160 aaKnown RBP15.21■□□□□ 0.02
CHRNA3-202ENST00000348639 OR11H1Q8NG94 326 aa15.2■□□□□ 0.02
CHRNA3-202ENST00000348639 ST20Q9HBF5 79 aa15.2■□□□□ 0.02
CHRNA3-202ENST00000348639 ESM1Q9NQ30 184 aa15.2■□□□□ 0.02
CHRNA3-202ENST00000348639 FAM159AQ6UWV7 190 aa15.19■□□□□ 0.02
CHRNA3-202ENST00000348639 Q6ZN92 141 aa15.19■□□□□ 0.02
CHRNA3-202ENST00000348639 Q8N8P6 123 aa15.19■□□□□ 0.02
CHRNA3-202ENST00000348639 IGLV2-18A0A075B6J9 118 aa15.19■□□□□ 0.02
CHRNA3-202ENST00000348639 TRAV26-2A0A0B4J265 109 aa15.19■□□□□ 0.02
CHRNA3-202ENST00000348639 A0A1B0GV90 55 aa15.19■□□□□ 0.02
CHRNA3-202ENST00000348639 C7orf71A4D174 169 aa15.19■□□□□ 0.02
CHRNA3-202ENST00000348639 DPF1Q92782 380 aa15.18■□□□□ 0.02
CHRNA3-202ENST00000348639 NF1P21359 2839 aa15.18■□□□□ 0.02
CHRNA3-202ENST00000348639 hDV102S1A0JD36 115 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 HSBP1L1C9JCN9 74 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 SPRY2O43597 315 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 FCER1GP30273 86 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 DPH3P1Q9H4G8 78 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 TRAV12-3A0A0B4J271 114 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 DUSP14O95147 198 aaKnown RBP15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 NXPH4O95158 308 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 HNRNPA3P51991 378 aaKnown RBP15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 KLHL30-AS1Q8NEE0 82 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 OR1N2Q8NGR9 330 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 PEMTQ9UBM1 199 aa15.17■□□□□ 0.02
CHRNA3-202ENST00000348639 FOXI2Q6ZQN5 318 aa15.16■□□□□ 0.02
CHRNA3-202ENST00000348639 OR9G4Q8NGQ1 327 aa15.16■□□□□ 0.02
CHRNA3-202ENST00000348639 IFI27L1Q96BM0 104 aa15.16■□□□□ 0.02
CHRNA3-202ENST00000348639 PMCHL2Q9BQD1 86 aa15.16■□□□□ 0.02
CHRNA3-202ENST00000348639 LGALS9BQ3B8N2 356 aa15.16■□□□□ 0.02
CHRNA3-202ENST00000348639 LGALS9CQ6DKI2 356 aa15.16■□□□□ 0.02
CHRNA3-202ENST00000348639 IGKV3-20P01619 116 aa15.15■□□□□ 0.02
CHRNA3-202ENST00000348639 TSPOP30536 169 aa15.15■□□□□ 0.02
CHRNA3-202ENST00000348639 C14orf178Q8N769 122 aaPredicted RBP15.15■□□□□ 0.02
CHRNA3-202ENST00000348639 AP1S3Q96PC3 154 aa15.15■□□□□ 0.02
CHRNA3-202ENST00000348639 CDKN1BP46527 198 aa15.14■□□□□ 0.01
CHRNA3-202ENST00000348639 C11orf44Q8N8P7 122 aa15.14■□□□□ 0.01
CHRNA3-202ENST00000348639 MRPS16Q9Y3D3 137 aaKnown RBP15.14■□□□□ 0.01
CHRNA3-202ENST00000348639 TRAV2A0A0B4J234 112 aa15.13■□□□□ 0.01
CHRNA3-202ENST00000348639 CD7P09564 240 aa15.13■□□□□ 0.01
CHRNA3-202ENST00000348639 TRAV12-2A0A075B6T6 113 aa15.12■□□□□ 0.01
CHRNA3-202ENST00000348639 DLX4Q92988 240 aaPredicted RBP15.12■□□□□ 0.01
CHRNA3-202ENST00000348639 GOLT1BQ9Y3E0 138 aa15.12■□□□□ 0.01
CHRNA3-202ENST00000348639 AMTNQ6UX39 209 aa15.12■□□□□ 0.01
CHRNA3-202ENST00000348639 TMEM158Q8WZ71 300 aa15.12■□□□□ 0.01
CHRNA3-202ENST00000348639 NUTF2P61970 127 aaKnown RBP15.11■□□□□ 0.01
CHRNA3-202ENST00000348639 LAGE3Q14657 143 aa15.11■□□□□ 0.01
CHRNA3-202ENST00000348639 SPINK13Q1W4C9 94 aa15.11■□□□□ 0.01
CHRNA3-202ENST00000348639 POM121L12Q8N7R1 296 aa15.11■□□□□ 0.01
CHRNA3-202ENST00000348639 RASL10AQ92737 203 aa15.11■□□□□ 0.01
CHRNA3-202ENST00000348639 C20orf78Q9BR46 151 aa15.1■□□□□ 0.01
CHRNA3-202ENST00000348639 SMIM2Q9BVW6 85 aa15.1■□□□□ 0.01
CHRNA3-202ENST00000348639 SORL1Q92673 2214 aa15.1■□□□□ 0.01
CHRNA3-202ENST00000348639 A0A1W2PRX2 142 aa15.1■□□□□ 0.01
CHRNA3-202ENST00000348639 MGPP08493 103 aa15.1■□□□□ 0.01
CHRNA3-202ENST00000348639 IGHV3-16A0A0C4DH30 117 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 MTORP42345 2549 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 TMEM61Q8N0U2 210 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 C18orf15Q96N68 181 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 SMR3AQ99954 134 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 KIF25-AS1Q9Y6Z4 181 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 MUC4Q99102 2169 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 IGHV1OR15-1A0A075B7D0 117 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 SUMO2P61956 95 aaKnown RBP15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 C9orf85Q96MD7 179 aa15.09■□□□□ 0.01
CHRNA3-202ENST00000348639 AGRNO00468 2067 aa15.08■□□□□ 0
CHRNA3-202ENST00000348639 TCAPO15273 167 aa15.08■□□□□ 0
CHRNA3-202ENST00000348639 DEFB131AP59861 70 aa15.08■□□□□ 0
CHRNA3-202ENST00000348639 BATFQ16520 125 aa15.08■□□□□ 0
CHRNA3-202ENST00000348639 SLC25A34Q6PIV7 304 aa15.08■□□□□ 0
CHRNA3-202ENST00000348639 A8MTW9 85 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 PPP1R17O96001 155 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 SMIM17P0DL12 118 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 LINC00315P59091 139 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 Q8N1Y9 231 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 DYNLRB2Q8TF09 96 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 KNCNA6PVL3 124 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 CD28P10747 220 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 HLA-DRB4P13762 266 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 RPL39LQ96EH5 51 aaKnown RBP15.07■□□□□ 0
CHRNA3-202ENST00000348639 HLA-DRB4X5D2U9 266 aa15.07■□□□□ 0
CHRNA3-202ENST00000348639 RNASE1P07998 156 aaKnown RBP15.06■□□□□ 0
CHRNA3-202ENST00000348639 SCGB2A2Q13296 93 aa15.06■□□□□ 0
CHRNA3-202ENST00000348639 DEFB114Q30KQ6 69 aa15.06■□□□□ 0
CHRNA3-202ENST00000348639 MDFICQ9P1T7 246 aa15.06■□□□□ 0
CHRNA3-202ENST00000348639 K7EMI3 77 aa15.05■□□□□ 0
CHRNA3-202ENST00000348639 ATP5LO75964 103 aa15.05■□□□□ 0
CHRNA3-202ENST00000348639 RAX2Q96IS3 184 aa15.05■□□□□ 0
CHRNA3-202ENST00000348639 H3BMM0 161 aa15.05■□□□□ -0
CHRNA3-202ENST00000348639 FHL3Q13643 280 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 LINC01006Q8NI28 216 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 C16orf95Q9H693 158 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 JPT2Q9H910 190 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 PRSS1P07477 247 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 ORMDL2Q53FV1 153 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 COL5A1-AS1Q5SY13 56 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 SYT8Q8NBV8 401 aa15.04■□□□□ -0
CHRNA3-202ENST00000348639 ZNF418Q8TF45 676 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms