RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 CFHR4Q92496 578 aa8.5□□□□□ -1.05
RPL28-201ENST00000344063 CLUHP3Q96NS8 147 aa8.5□□□□□ -1.05
RPL28-201ENST00000344063 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
RPL28-201ENST00000344063 IGHV1-69DA0A0B4J2H0 117 aa8.5□□□□□ -1.05
RPL28-201ENST00000344063 IGHV1-69P01742 117 aa8.5□□□□□ -1.05
RPL28-201ENST00000344063 GAGE2AQ6NT46 116 aa8.5□□□□□ -1.05
RPL28-201ENST00000344063 C15orf53Q8NAA6 179 aa8.5□□□□□ -1.05
RPL28-201ENST00000344063 AGPAT4-IT1Q9H0P7 198 aa8.5□□□□□ -1.05
RPL28-201ENST00000344063 FOXE3Q13461 319 aa8.49□□□□□ -1.05
RPL28-201ENST00000344063 RS1O15537 224 aa8.49□□□□□ -1.05
RPL28-201ENST00000344063 LGALS1P09382 135 aaKnown RBP8.49□□□□□ -1.05
RPL28-201ENST00000344063 CACNA1AO00555 2505 aa8.49□□□□□ -1.05
RPL28-201ENST00000344063 FOXI1Q12951 378 aa8.49□□□□□ -1.05
RPL28-201ENST00000344063 OTOGLQ3ZCN5 2332 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 WI2-2373I1.2A0A1W2PRP0 233 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 ODF1Q14990 250 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 RUSC1-AS1Q66K80 236 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 C2orf91Q6ZV80 131 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 Q8N7P7 452 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 TMEM141Q96I45 108 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 TIMM21Q9BVV7 248 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 IGKV2D-26A0A0A0MRZ7 120 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 PMVKQ15126 192 aa8.48□□□□□ -1.05
RPL28-201ENST00000344063 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
RPL28-201ENST00000344063 IGHV7-81A0A0B4J1V7 117 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 CTSGP08311 255 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 TRPT1Q86TN4 253 aaKnown RBP8.47□□□□□ -1.05
RPL28-201ENST00000344063 RNF183Q96D59 192 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 MLST8Q9BVC4 326 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 SDHAF1A6NFY7 115 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 MT-ATP8P03928 68 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 HOXB4P17483 251 aaPredicted RBP8.47□□□□□ -1.05
RPL28-201ENST00000344063 RNASE13Q5GAN3 156 aaKnown RBP8.47□□□□□ -1.05
RPL28-201ENST00000344063 KNCNA6PVL3 124 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 ZNF415Q09FC8 603 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 STHQ8IWL8 128 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 PTPRQQ9UMZ3 2332 aa8.47□□□□□ -1.05
RPL28-201ENST00000344063 PIP4P2Q8N4L2 257 aa8.46□□□□□ -1.05
RPL28-201ENST00000344063 J3QQQ9 107 aa8.46□□□□□ -1.05
RPL28-201ENST00000344063 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.05
RPL28-201ENST00000344063 PRO3102Q9H379 93 aa8.46□□□□□ -1.05
RPL28-201ENST00000344063 VWC2LB2RUY7 222 aa8.46□□□□□ -1.06
RPL28-201ENST00000344063 MSMBP08118 114 aa8.46□□□□□ -1.06
RPL28-201ENST00000344063 CUL9Q8IWT3 2517 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
RPL28-201ENST00000344063 PRAC2D3DTV9 90 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 TEN1Q86WV5 123 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 ANKRD29Q8N6D5 301 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 TRGV2A0A075B6R0 118 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 F6UB75 175 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 BUB3O43684 328 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 GATA3P23771 443 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 HIGD1BQ9P298 99 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 PIEZO2Q9H5I5 2752 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 SORL1Q92673 2214 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 A0A1W2PRX2 142 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 H3BUA1 57 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 ZNF493Q6ZR52 646 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 GATD1Q8NB37 220 aa8.45□□□□□ -1.06
RPL28-201ENST00000344063 SPANXB1Q9NS25 103 aaPredicted RBP8.45□□□□□ -1.06
RPL28-201ENST00000344063 CENPVL3A0A0U1RRI6 287 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 MORN3Q6PF18 240 aaPredicted RBP8.44□□□□□ -1.06
RPL28-201ENST00000344063 PRRC2CQ9Y520 2896 aaKnown RBP8.44□□□□□ -1.06
RPL28-201ENST00000344063 EXPH5Q8NEV8 1989 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 LY6G5BQ8NDX9 201 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 CARD19Q96LW7 228 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 GNRH2O43555 120 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 GHRHP01286 108 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 CSPG4Q6UVK1 2322 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 TRACP01848 142 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 CFC1BP0CG36 223 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 CFC1P0CG37 223 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 S100A7L2Q5SY68 101 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 Q8N9W7 124 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 C1orf159Q96HA4 380 aa8.44□□□□□ -1.06
RPL28-201ENST00000344063 INSL3P51460 131 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 URB1-AS1Q96HZ7 61 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 TRAV13-1A0A0B4J241 112 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 IGHV7-4-1A0A0J9YVY3 117 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 SYNJ2BPP57105 145 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 KLK9Q9UKQ9 250 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 A4D1N5 150 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 ZFP2Q6ZN57 461 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 FANCD2OSQ96PS1 177 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 PIEZO1Q92508 2521 aa8.43□□□□□ -1.06
RPL28-201ENST00000344063 TRAV12-2A0A075B6T6 113 aa8.42□□□□□ -1.06
RPL28-201ENST00000344063 IGHV1OR15-1A0A075B7D0 117 aa8.42□□□□□ -1.06
RPL28-201ENST00000344063 RPL36AP83881 106 aaKnown RBP8.42□□□□□ -1.06
RPL28-201ENST00000344063 RPL36ALQ969Q0 106 aaKnown RBP8.42□□□□□ -1.06
RPL28-201ENST00000344063 LINC00158P58513 81 aa8.42□□□□□ -1.06
RPL28-201ENST00000344063 MAPKAPK5-AS1Q8N8E1 139 aa8.42□□□□□ -1.06
RPL28-201ENST00000344063 RHODO00212 210 aa8.42□□□□□ -1.06
RPL28-201ENST00000344063 ZNF80P51504 273 aaPredicted RBP8.42□□□□□ -1.06
RPL28-201ENST00000344063 DEFB1P60022 68 aa8.42□□□□□ -1.06
RPL28-201ENST00000344063 SPINK13Q1W4C9 94 aa8.42□□□□□ -1.06
RPL28-201ENST00000344063 PTPN13Q12923 2485 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 MYCNOSP40205 109 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 SRSF2Q01130 221 aaKnown RBP8.41□□□□□ -1.06
RPL28-201ENST00000344063 FBXL19-AS1Q494R0 122 aa8.41□□□□□ -1.06
RPL28-201ENST00000344063 SP5Q6BEB4 398 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms