RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 UBE2G2P60604 165 aa13.79□□□□□ -0.2
SYNE2-201ENST00000341472 ZNF876PQ49A33 203 aa13.79□□□□□ -0.2
SYNE2-201ENST00000341472 TXNDC17Q9BRA2 123 aa13.79□□□□□ -0.2
SYNE2-201ENST00000341472 NKX6-2Q9C056 277 aaPredicted RBP13.79□□□□□ -0.2
SYNE2-201ENST00000341472 ARL2-SNX15V9GYD0 113 aa13.79□□□□□ -0.2
SYNE2-201ENST00000341472 TRAV9-2A0A087WT02 112 aa13.78□□□□□ -0.2
SYNE2-201ENST00000341472 TRAV34A0A0B4J273 112 aa13.78□□□□□ -0.2
SYNE2-201ENST00000341472 A0A1B0GV50 99 aa13.78□□□□□ -0.2
SYNE2-201ENST00000341472 IFNA1P01562 189 aa13.78□□□□□ -0.2
SYNE2-201ENST00000341472 TAGLN2P37802 199 aaKnown RBP13.78□□□□□ -0.2
SYNE2-201ENST00000341472 KRTAP17-1Q9BYP8 105 aa13.78□□□□□ -0.2
SYNE2-201ENST00000341472 MANBALQ9NQG1 85 aa13.78□□□□□ -0.2
SYNE2-201ENST00000341472 LINC00315P59091 139 aa13.77□□□□□ -0.21
SYNE2-201ENST00000341472 CCL20P78556 96 aa13.77□□□□□ -0.21
SYNE2-201ENST00000341472 LRP1BQ9NZR2 4599 aa13.76□□□□□ -0.21
SYNE2-201ENST00000341472 FAM74A7A6NL05 159 aa13.76□□□□□ -0.21
SYNE2-201ENST00000341472 CIDEAO60543 219 aa13.76□□□□□ -0.21
SYNE2-201ENST00000341472 SH2D6Q7Z4S9 175 aa13.76□□□□□ -0.21
SYNE2-201ENST00000341472 SPATA12Q7Z6I5 190 aa13.76□□□□□ -0.21
SYNE2-201ENST00000341472 HIST1H2BAQ96A08 127 aa13.76□□□□□ -0.21
SYNE2-201ENST00000341472 RYR1P21817 5038 aa13.76□□□□□ -0.21
SYNE2-201ENST00000341472 FABP5P3A8MUU1 101 aa13.75□□□□□ -0.21
SYNE2-201ENST00000341472 PEX7O00628 323 aa13.75□□□□□ -0.21
SYNE2-201ENST00000341472 RS1O15537 224 aa13.75□□□□□ -0.21
SYNE2-201ENST00000341472 GATA1P15976 413 aaPredicted RBP13.75□□□□□ -0.21
SYNE2-201ENST00000341472 PTH2Q96A98 100 aa13.75□□□□□ -0.21
SYNE2-201ENST00000341472 C9orf85Q96MD7 179 aa13.75□□□□□ -0.21
SYNE2-201ENST00000341472 GNG13Q9P2W3 67 aa13.75□□□□□ -0.21
SYNE2-201ENST00000341472 LOC100131303A0A0U1RQF7 123 aa13.74□□□□□ -0.21
SYNE2-201ENST00000341472 CFAP126Q5VTH2 177 aa13.74□□□□□ -0.21
SYNE2-201ENST00000341472 LY96Q9Y6Y9 160 aa13.74□□□□□ -0.21
SYNE2-201ENST00000341472 PAGE4O60829 102 aa13.73□□□□□ -0.21
SYNE2-201ENST00000341472 NHLRC2Q8NBF2 726 aa13.73□□□□□ -0.21
SYNE2-201ENST00000341472 IGKV3D-20A0A0C4DH25 116 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 PGPEP1LA6NFU8 196 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 RNASE3P12724 160 aaKnown RBP13.72□□□□□ -0.21
SYNE2-201ENST00000341472 EVI2AP22794 236 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 S100A4P26447 101 aaKnown RBP13.72□□□□□ -0.21
SYNE2-201ENST00000341472 CST9LP1Q5W188 147 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 Q6ZRN7 208 aaPredicted RBP13.72□□□□□ -0.21
SYNE2-201ENST00000341472 NFE4Q86UQ8 179 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 SLC25A29Q8N8R3 303 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 PRADC1Q9BSG0 188 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 VAX2Q9UIW0 290 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 TNFRSF18Q9Y5U5 241 aa13.72□□□□□ -0.21
SYNE2-201ENST00000341472 IGHV3-73A0A0B4J1V6 119 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 RBFOX3A6NFN3 312 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 K7EP13 123 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 BCL2P10415 239 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 TIRAPP58753 221 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 ZNF506Q5JVG8 444 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 WFDC10BQ8IUB3 73 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 FAM210AQ96ND0 272 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 TCEAL7Q9BRU2 100 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 ZFP30Q9Y2G7 519 aa13.71□□□□□ -0.21
SYNE2-201ENST00000341472 TRBV6-4A0A1B0GX49 114 aa13.7□□□□□ -0.22
SYNE2-201ENST00000341472 Q86TA4 180 aa13.7□□□□□ -0.22
SYNE2-201ENST00000341472 MED9Q9NWA0 146 aa13.7□□□□□ -0.22
SYNE2-201ENST00000341472 NDUFS6O75380 124 aaKnown RBP13.69□□□□□ -0.22
SYNE2-201ENST00000341472 DNAH10OSP0CZ25 163 aa13.69□□□□□ -0.22
SYNE2-201ENST00000341472 ASIPP42127 132 aa13.69□□□□□ -0.22
SYNE2-201ENST00000341472 KRTAP10-2P60368 255 aa13.69□□□□□ -0.22
SYNE2-201ENST00000341472 RHOHQ15669 191 aa13.69□□□□□ -0.22
SYNE2-201ENST00000341472 EIF5A2Q9GZV4 153 aaKnown RBP13.69□□□□□ -0.22
SYNE2-201ENST00000341472 DNAH5Q8TE73 4624 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 RAB19A4D1S5 217 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 EREGO14944 169 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 CDK2AP2O75956 126 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 CRIP1P50238 77 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 UBE2G1P62253 170 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 MEF2BQ02080 365 aaPredicted RBP13.68□□□□□ -0.22
SYNE2-201ENST00000341472 COX8CQ7Z4L0 72 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 FMC1Q96HJ9 113 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 SMDT1Q9H4I9 107 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 MSRB1Q9NZV6 116 aa13.68□□□□□ -0.22
SYNE2-201ENST00000341472 A8MWV9 139 aa13.67□□□□□ -0.22
SYNE2-201ENST00000341472 B4DEV8 164 aa13.67□□□□□ -0.22
SYNE2-201ENST00000341472 PDE6DO43924 150 aa13.67□□□□□ -0.22
SYNE2-201ENST00000341472 MGST1P10620 155 aaKnown RBP13.67□□□□□ -0.22
SYNE2-201ENST00000341472 PEA15Q15121 130 aa13.67□□□□□ -0.22
SYNE2-201ENST00000341472 PIK3CD-AS1Q5SR53 167 aa13.67□□□□□ -0.22
SYNE2-201ENST00000341472 ZC2HC1AQ96GY0 325 aa13.67□□□□□ -0.22
SYNE2-201ENST00000341472 PCLOQ9Y6V0 5065 aa13.67□□□□□ -0.22
SYNE2-201ENST00000341472 HSPG2P98160 4391 aa13.67□□□□□ -0.22
SYNE2-201ENST00000341472 TRAV8-6A0A0B4J262 113 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 TRBV6-1A0A0K0K1D8 114 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 LINC00862A6NCI5 91 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 KRBOX1C9JBD0 128 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 CRYGDP07320 174 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 TOR2AQ5JU69 321 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 C10orf126Q8N4M7 172 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 PGPEP1Q9NXJ5 209 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 IL36BQ9NZH7 164 aa13.66□□□□□ -0.22
SYNE2-201ENST00000341472 IGHV3-38A0A0C4DH36 116 aa13.65□□□□□ -0.22
SYNE2-201ENST00000341472 M0R036 132 aa13.65□□□□□ -0.22
SYNE2-201ENST00000341472 SH2D1AO60880 128 aa13.65□□□□□ -0.22
SYNE2-201ENST00000341472 FAM162BQ5T6X4 162 aa13.65□□□□□ -0.22
SYNE2-201ENST00000341472 ZFP2Q6ZN57 461 aa13.65□□□□□ -0.22
SYNE2-201ENST00000341472 Q6ZSN1 163 aa13.65□□□□□ -0.22
SYNE2-201ENST00000341472 ARMS2P0C7Q2 107 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms