RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 C9orf118A6NHY6 69 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 CBY3A6NI87 242 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 PRAC2D3DTV9 90 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 SOCS3O14543 225 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 PPP1R17O96001 155 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 IGHV3-23P01764 117 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 HLA-DMBP28068 263 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 TAL2Q16559 108 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 PRR31Q5SQ13 230 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 CLEC19AQ6UXS0 136 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 NRACQ8N912 160 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 OR2K2Q8NGT1 345 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 FAM19A4Q96LR4 140 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 C20orf78Q9BR46 151 aa8.19□□□□□ -1.1
RTN3-201ENST00000338850 PKD1L1Q8TDX9 2849 aa8.18□□□□□ -1.1
RTN3-201ENST00000338850 IGHV3OR16-10A0A075B7F0 116 aa8.18□□□□□ -1.1
RTN3-201ENST00000338850 IGHV1-69DA0A0B4J2H0 117 aa8.18□□□□□ -1.1
RTN3-201ENST00000338850 NXPH4O95158 308 aa8.18□□□□□ -1.1
RTN3-201ENST00000338850 IGHV1-69P01742 117 aa8.18□□□□□ -1.1
RTN3-201ENST00000338850 RNASE1P07998 156 aaKnown RBP8.18□□□□□ -1.1
RTN3-201ENST00000338850 RBX1P62877 108 aa8.18□□□□□ -1.1
RTN3-201ENST00000338850 UFSP1Q6NVU6 142 aa8.18□□□□□ -1.1
RTN3-201ENST00000338850 GTF2H5Q6ZYL4 71 aa8.18□□□□□ -1.1
RTN3-201ENST00000338850 TRAV21A0A0B4J279 112 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 DPM2O94777 84 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 IGKCP01834 107 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 IGHG2P01859 326 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 LEPP41159 167 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 ERCC8Q13216 396 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 LAGE3Q14657 143 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 ORMDL2Q53FV1 153 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 SHISA2Q6UWI4 295 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 C11orf21Q9P2W6 132 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 HHLA3Q9XRX5 114 aa8.17□□□□□ -1.1
RTN3-201ENST00000338850 TRAV40A0A0B4J280 105 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 G3V318 75 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 H0Y8G0 127 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 SMKR1H3BMG3 65 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 PLNP26678 52 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 PPIFP30405 207 aaKnown RBP8.16□□□□□ -1.1
RTN3-201ENST00000338850 ARL3P36405 182 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 ZFAND2AQ8N6M9 145 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 OR5A1Q8NGJ0 315 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 SMIM2Q9BVW6 85 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 MSRB1Q9NZV6 116 aa8.16□□□□□ -1.1
RTN3-201ENST00000338850 A0A087WX48 190 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 K7EMT4 169 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 WIPF1O43516 503 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 RNF182Q8N6D2 247 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 RNASE8Q8TDE3 154 aaKnown RBP8.15□□□□□ -1.1
RTN3-201ENST00000338850 C16orf92Q96LL3 132 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 ODF3Q96PU9 254 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 TM2D2Q9BX73 214 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 DPH3P1Q9H4G8 78 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 TP73-AS1Q9UF72 201 aa8.15□□□□□ -1.1
RTN3-201ENST00000338850 TRAV8-6A0A0B4J262 113 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 A0A0G2JLM5 398 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 A6NDX4 124 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 K7EP34 96 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 TRGV3P03979 118 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 SMIM17P0DL12 118 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 DEFB112Q30KQ8 113 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 IGFL4Q6B9Z1 124 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 BRD3OSQ6XYD6 125 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 Q6ZVH6 145 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 GPHB5Q86YW7 130 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 OR10J6PQ8NGY7 276 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 MYOZ3Q8TDC0 251 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 AP1S3Q96PC3 154 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 MCRIP2Q9BUT9 160 aaKnown RBP8.14□□□□□ -1.11
RTN3-201ENST00000338850 CST9LQ9H4G1 147 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 DKK2Q9UBU2 259 aa8.14□□□□□ -1.11
RTN3-201ENST00000338850 K7ERU9 68 aa8.13□□□□□ -1.11
RTN3-201ENST00000338850 HOXA3O43365 443 aaPredicted RBP8.13□□□□□ -1.11
RTN3-201ENST00000338850 IGLV1-40P01703 118 aa8.13□□□□□ -1.11
RTN3-201ENST00000338850 ASIPP42127 132 aa8.13□□□□□ -1.11
RTN3-201ENST00000338850 CFHR3Q02985 330 aa8.13□□□□□ -1.11
RTN3-201ENST00000338850 FOXE3Q13461 319 aa8.13□□□□□ -1.11
RTN3-201ENST00000338850 SPANXN1Q5VSR9 72 aa8.13□□□□□ -1.11
RTN3-201ENST00000338850 AMMECR1LQ6DCA0 310 aa8.13□□□□□ -1.11
RTN3-201ENST00000338850 TIMM8BQ9Y5J9 83 aaPredicted RBP8.13□□□□□ -1.11
RTN3-201ENST00000338850 IGHV4OR15-8A0A075B7B6 117 aa8.12□□□□□ -1.11
RTN3-201ENST00000338850 A0A087WW49 117 aa8.12□□□□□ -1.11
RTN3-201ENST00000338850 LINC01548A6NM66 108 aa8.12□□□□□ -1.11
RTN3-201ENST00000338850 F8VRH5 84 aa8.12□□□□□ -1.11
RTN3-201ENST00000338850 SUMO2P61956 95 aaKnown RBP8.12□□□□□ -1.11
RTN3-201ENST00000338850 OCIAD2Q56VL3 154 aa8.12□□□□□ -1.11
RTN3-201ENST00000338850 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
RTN3-201ENST00000338850 IGHV3-35A0A0C4DH35 117 aa8.11□□□□□ -1.11
RTN3-201ENST00000338850 GAGE10A6NGK3 116 aa8.11□□□□□ -1.11
RTN3-201ENST00000338850 KLLNB2CW77 178 aa8.11□□□□□ -1.11
RTN3-201ENST00000338850 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.11□□□□□ -1.11
RTN3-201ENST00000338850 H7C1H1 209 aa8.11□□□□□ -1.11
RTN3-201ENST00000338850 PRSS1P07477 247 aa8.11□□□□□ -1.11
RTN3-201ENST00000338850 NMUP48645 174 aa8.11□□□□□ -1.11
RTN3-201ENST00000338850 Q6YL49 198 aa8.11□□□□□ -1.11
RTN3-201ENST00000338850 PCP2Q8IVA1 136 aa8.11□□□□□ -1.11
RTN3-201ENST00000338850 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms