RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 NDUFA4O00483 81 aa13.48□□□□□ -0.25
IFFO1-201ENST00000336604 CKS1BP61024 79 aa13.48□□□□□ -0.25
IFFO1-201ENST00000336604 SRSF1Q07955 248 aaKnown RBP eCLIP13.48□□□□□ -0.254e-6■■□□□ 13.4
IFFO1-201ENST00000336604 Q6ZS46 218 aa13.48□□□□□ -0.25
IFFO1-201ENST00000336604 LINC00477Q96M19 166 aa13.48□□□□□ -0.25
IFFO1-201ENST00000336604 HIST1H4GQ99525 98 aa13.48□□□□□ -0.25
IFFO1-201ENST00000336604 S100A4P26447 101 aaKnown RBP13.47□□□□□ -0.25
IFFO1-201ENST00000336604 BLCAPP62952 87 aa13.47□□□□□ -0.25
IFFO1-201ENST00000336604 C12orf74Q32Q52 190 aa13.47□□□□□ -0.25
IFFO1-201ENST00000336604 C14orf178Q8N769 122 aaPredicted RBP13.47□□□□□ -0.25
IFFO1-201ENST00000336604 SMIM2Q9BVW6 85 aa13.47□□□□□ -0.25
IFFO1-201ENST00000336604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.47□□□□□ -0.255e-7■□□□□ 9.6
IFFO1-201ENST00000336604 TRAV21A0A0B4J279 112 aa13.47□□□□□ -0.25
IFFO1-201ENST00000336604 H3BUX3 64 aa13.47□□□□□ -0.25
IFFO1-201ENST00000336604 ANXA2RQ3ZCQ2 193 aa13.47□□□□□ -0.25
IFFO1-201ENST00000336604 GAGE13Q4V321 117 aa13.47□□□□□ -0.25
IFFO1-201ENST00000336604 RPL39LQ96EH5 51 aaKnown RBP13.47□□□□□ -0.25
IFFO1-201ENST00000336604 MRAP2Q96G30 205 aa13.47□□□□□ -0.25
IFFO1-201ENST00000336604 PF4V1P10720 104 aa13.46□□□□□ -0.25
IFFO1-201ENST00000336604 RNASE4P34096 147 aaKnown RBP13.46□□□□□ -0.25
IFFO1-201ENST00000336604 SPATA25Q9BR10 227 aa13.46□□□□□ -0.25
IFFO1-201ENST00000336604 PSMG4Q5JS54 123 aa13.46□□□□□ -0.26
IFFO1-201ENST00000336604 RASL10AQ92737 203 aa13.46□□□□□ -0.26
IFFO1-201ENST00000336604 PHLDA3Q9Y5J5 127 aa13.46□□□□□ -0.26
IFFO1-201ENST00000336604 FLNCQ14315 2725 aa13.45□□□□□ -0.26
IFFO1-201ENST00000336604 A0A087WX48 190 aa13.45□□□□□ -0.26
IFFO1-201ENST00000336604 NDUFS8O00217 210 aa13.45□□□□□ -0.26
IFFO1-201ENST00000336604 GNRH2O43555 120 aa13.45□□□□□ -0.26
IFFO1-201ENST00000336604 SRD5A1P18405 259 aa13.45□□□□□ -0.26
IFFO1-201ENST00000336604 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
IFFO1-201ENST00000336604 A0A1B0GWB2 263 aa13.44□□□□□ -0.26
IFFO1-201ENST00000336604 OVOL1O14753 267 aa13.44□□□□□ -0.26
IFFO1-201ENST00000336604 IGHG2P01859 326 aa13.44□□□□□ -0.26
IFFO1-201ENST00000336604 ASIPP42127 132 aa13.44□□□□□ -0.26
IFFO1-201ENST00000336604 SFTA2Q6UW10 78 aa13.44□□□□□ -0.26
IFFO1-201ENST00000336604 C20orf78Q9BR46 151 aa13.44□□□□□ -0.26
IFFO1-201ENST00000336604 PIMREGQ9BSJ6 248 aa13.44□□□□□ -0.26
IFFO1-201ENST00000336604 EDN2P20800 178 aa13.43□□□□□ -0.26
IFFO1-201ENST00000336604 RHPN1-AS1Q9BWJ2 59 aa13.43□□□□□ -0.26
IFFO1-201ENST00000336604 UTP20O75691 2785 aaKnown RBP13.43□□□□□ -0.26
IFFO1-201ENST00000336604 PKD1L2Q7Z442 2459 aa13.43□□□□□ -0.26
IFFO1-201ENST00000336604 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
IFFO1-201ENST00000336604 MGPP08493 103 aa13.43□□□□□ -0.26
IFFO1-201ENST00000336604 USMG5Q96IX5 58 aa13.43□□□□□ -0.26
IFFO1-201ENST00000336604 DPH3P1Q9H4G8 78 aa13.43□□□□□ -0.26
IFFO1-201ENST00000336604 CSPG4Q6UVK1 2322 aa13.42□□□□□ -0.26
IFFO1-201ENST00000336604 RNASE3P12724 160 aaKnown RBP13.41□□□□□ -0.26
IFFO1-201ENST00000336604 PLNP26678 52 aa13.41□□□□□ -0.26
IFFO1-201ENST00000336604 RRN3P1Q2M238 152 aa13.41□□□□□ -0.26
IFFO1-201ENST00000336604 C10orf105Q8TEF2 133 aa13.41□□□□□ -0.26
IFFO1-201ENST00000336604 FAM19A4Q96LR4 140 aa13.41□□□□□ -0.26
IFFO1-201ENST00000336604 SCGB3A1Q96QR1 104 aa13.41□□□□□ -0.26
IFFO1-201ENST00000336604 CCL19Q99731 98 aa13.41□□□□□ -0.26
IFFO1-201ENST00000336604 A6NDX4 124 aa13.41□□□□□ -0.26
IFFO1-201ENST00000336604 APOMO95445 188 aa13.41□□□□□ -0.26
IFFO1-201ENST00000336604 IGHV4-30-2A0A087WSY4 118 aa13.4□□□□□ -0.26
IFFO1-201ENST00000336604 SCGB2A2Q13296 93 aa13.4□□□□□ -0.26
IFFO1-201ENST00000336604 ORMDL2Q53FV1 153 aa13.4□□□□□ -0.26
IFFO1-201ENST00000336604 PRO0461Q9UI25 63 aa13.4□□□□□ -0.26
IFFO1-201ENST00000336604 RNF223E7ERA6 249 aa13.4□□□□□ -0.26
IFFO1-201ENST00000336604 F8VRH5 84 aa13.4□□□□□ -0.26
IFFO1-201ENST00000336604 TOMM6Q96B49 74 aa13.4□□□□□ -0.26
IFFO1-201ENST00000336604 CYSLTR1Q9Y271 337 aa13.4□□□□□ -0.26
IFFO1-201ENST00000336604 PRORYQ9H606 182 aa13.39□□□□□ -0.27
IFFO1-201ENST00000336604 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
IFFO1-201ENST00000336604 H7C1H1 209 aa13.39□□□□□ -0.27
IFFO1-201ENST00000336604 TMEM95Q3KNT9 176 aa13.39□□□□□ -0.27
IFFO1-201ENST00000336604 H3BUA1 57 aa13.38□□□□□ -0.27
IFFO1-201ENST00000336604 HLA-DRB4P13762 266 aa13.38□□□□□ -0.27
IFFO1-201ENST00000336604 SYT8Q8NBV8 401 aa13.38□□□□□ -0.27
IFFO1-201ENST00000336604 DEFB104AQ8WTQ1 72 aa13.38□□□□□ -0.27
IFFO1-201ENST00000336604 HLA-DRB4X5D2U9 266 aa13.38□□□□□ -0.27
IFFO1-201ENST00000336604 CRYBA4P53673 196 aa13.38□□□□□ -0.27
IFFO1-201ENST00000336604 C2orf66Q6UXQ4 117 aa13.38□□□□□ -0.27
IFFO1-201ENST00000336604 TRAV12-1A0A0B4J245 112 aa13.37□□□□□ -0.27
IFFO1-201ENST00000336604 IGLV1-40P01703 118 aa13.37□□□□□ -0.27
IFFO1-201ENST00000336604 ATP5J2P56134 94 aa13.37□□□□□ -0.27
IFFO1-201ENST00000336604 NEXN-AS1Q8NBZ9 246 aa13.37□□□□□ -0.27
IFFO1-201ENST00000336604 SVIPQ8NHG7 77 aa13.37□□□□□ -0.27
IFFO1-201ENST00000336604 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
IFFO1-201ENST00000336604 APRG1Q8IVJ8 170 aa13.37□□□□□ -0.27
IFFO1-201ENST00000336604 USP9XQ93008 2570 aaPredicted RBP13.37□□□□□ -0.27
IFFO1-201ENST00000336604 MUC4Q99102 2169 aa13.37□□□□□ -0.27
IFFO1-201ENST00000336604 PGPEP1Q9NXJ5 209 aa13.37□□□□□ -0.27
IFFO1-201ENST00000336604 BRI3O95415 125 aa13.36□□□□□ -0.27
IFFO1-201ENST00000336604 AVPP01185 164 aa13.36□□□□□ -0.27
IFFO1-201ENST00000336604 ZANQ9Y493 2812 aa13.36□□□□□ -0.27
IFFO1-201ENST00000336604 MRPL16Q9NX20 251 aaKnown RBP13.36□□□□□ -0.27
IFFO1-201ENST00000336604 MSMBP08118 114 aa13.36□□□□□ -0.27
IFFO1-201ENST00000336604 TAL2Q16559 108 aa13.36□□□□□ -0.27
IFFO1-201ENST00000336604 BAALCQ8WXS3 180 aa13.36□□□□□ -0.27
IFFO1-201ENST00000336604 JPT2Q9H910 190 aa13.36□□□□□ -0.27
IFFO1-201ENST00000336604 TRBV7-3A0A075B6L6 115 aa13.35□□□□□ -0.27
IFFO1-201ENST00000336604 SLC25A16P16260 332 aa13.35□□□□□ -0.27
IFFO1-201ENST00000336604 ZNF418Q8TF45 676 aaPredicted RBP13.35□□□□□ -0.27
IFFO1-201ENST00000336604 MED14OSP0DP75 135 aa13.35□□□□□ -0.27
IFFO1-201ENST00000336604 FOXI1Q12951 378 aa13.35□□□□□ -0.27
IFFO1-201ENST00000336604 TCTEX1D4Q5JR98 221 aa13.35□□□□□ -0.27
IFFO1-201ENST00000336604 MORN3Q6PF18 240 aaPredicted RBP13.35□□□□□ -0.27
IFFO1-201ENST00000336604 LOC107984156A0A0G2JMH3 177 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms