RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 TNFRSF18Q9Y5U5 241 aa5.05□□□□□ -1.6
HMG20A-201ENST00000336216 SMG1Q96Q15 3661 aaKnown RBP5.04□□□□□ -1.6
HMG20A-201ENST00000336216 TRBV7-1A0A0A6YYK4 115 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 GAGE12HA6NDE8 117 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 Q6AWC8 147 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 TMEM262E9PQX1 116 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 G3V4G9 280 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 CTSGP08311 255 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 RPL35AP18077 110 aaKnown RBP5.04□□□□□ -1.6
HMG20A-201ENST00000336216 DAZ1Q9NQZ3 744 aaKnown RBP5.04□□□□□ -1.6
HMG20A-201ENST00000336216 MRPL35Q9NZE8 188 aaKnown RBP5.04□□□□□ -1.6
HMG20A-201ENST00000336216 XCL2Q9UBD3 114 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 PRAC2D3DTV9 90 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 I3L2K1 104 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 TNFRSF6BO95407 300 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 FAM110DQ8TAY7 271 aaPredicted RBP5.04□□□□□ -1.6
HMG20A-201ENST00000336216 TOMM7Q9P0U1 55 aa5.04□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV3-16A0A0C4DH30 117 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 A0A1B0GW15 77 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 C19orf71A6NCJ1 209 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 TEX22C9J3V5 150 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 HOXA3O43365 443 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-201ENST00000336216 SUMO2P61956 95 aaKnown RBP5.03□□□□□ -1.6
HMG20A-201ENST00000336216 LGALS9BQ3B8N2 356 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 LGALS9CQ6DKI2 356 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 Q8N9W7 124 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 LINC01356Q8N9X3 169 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 TRBV12-3P01733 135 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 EGR2P11161 476 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-201ENST00000336216 STHQ8IWL8 128 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 THAP8Q8NA92 274 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 OR11H6Q8NGC7 330 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 MLST8Q9BVC4 326 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 AGPAT4-IT1Q9H0P7 198 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 PGPEP1Q9NXJ5 209 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 TRBV25-1A0A075B6N4 114 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 IGKV2D-26A0A0A0MRZ7 120 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 ZNF876PQ49A33 203 aa5.03□□□□□ -1.6
HMG20A-201ENST00000336216 PHLDA1Q8WV24 401 aaPredicted RBP5.03□□□□□ -1.6
HMG20A-201ENST00000336216 GEMIN7Q9H840 131 aaKnown RBP5.03□□□□□ -1.6
HMG20A-201ENST00000336216 HELZ2Q9BYK8 2649 aaKnown RBP5.03□□□□□ -1.61
HMG20A-201ENST00000336216 H3BRN7 92 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 GNRH2O43555 120 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 ANXA2RQ3ZCQ2 193 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 BOD1L2Q8IYS8 172 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 KLF12Q9Y4X4 402 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 RELNP78509 3460 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 F8P00451 2351 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 CHD6Q8TD26 2715 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 ZNF815PA8K554 130 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 ATP5LO75964 103 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 CFHR3Q02985 330 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 NXT2Q9NPJ8 142 aaKnown RBP5.02□□□□□ -1.61
HMG20A-201ENST00000336216 FLNCQ14315 2725 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 NPC2P61916 151 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 TCTEX1D4Q5JR98 221 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 C9orf139Q6ZV77 190 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 FANCD2OSQ96PS1 177 aa5.02□□□□□ -1.61
HMG20A-201ENST00000336216 GAS8-AS1O95177 125 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 SPINK8P0C7L1 97 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 LGALS3P17931 250 aaKnown RBP5.01□□□□□ -1.61
HMG20A-201ENST00000336216 SRSF1Q07955 248 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMG20A-201ENST00000336216 LYPD1Q8N2G4 141 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 OVOL1O14753 267 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 UBE2L6O14933 153 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 UNQ9165/PRO28630Q6UXU0 137 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 TRGV1A0A0A0MS02 117 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 LINC01549A6NIU2 74 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 PDE6HQ13956 83 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 ITPR3Q14573 2671 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 USMG5Q96IX5 58 aa5.01□□□□□ -1.61
HMG20A-201ENST00000336216 FLNAP21333 2647 aaKnown RBP5.01□□□□□ -1.61
HMG20A-201ENST00000336216 IGLV11-55A0A075B6I3 123 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 A0A1W2PPR1 153 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 CRIP1P50238 77 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 LMO4P61968 165 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 CLUHP3Q96NS8 147 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 ATP6V0BQ99437 205 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 VCX2Q9H322 139 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 CHTOPQ9Y3Y2 248 aaKnown RBP5□□□□□ -1.61
HMG20A-201ENST00000336216 TMEM238LA0A1B0GVL6 79 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 A6NJY4 79 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 LAGE3Q14657 143 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 C12orf74Q32Q52 190 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 CEND1Q8N111 149 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 PTH2Q96A98 100 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 AJUBAQ96IF1 538 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 PEMTQ9UBM1 199 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 IGHV3-38A0A0C4DH36 116 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 IGLL5B9A064 214 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 DEFB130BP0DP73 79 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 DEFB130AP0DP74 79 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 HLA-DRB4P13762 266 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 SLC25A16P16260 332 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 MEIG1Q5JSS6 88 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 C10orf99Q6UWK7 81 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 DTX2Q86UW9 622 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 HLA-DRB4X5D2U9 266 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 TRAV8-2A0A0B4J237 113 aa5□□□□□ -1.61
HMG20A-201ENST00000336216 RNASE1P07998 156 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms