RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 C19orf54Q5BKX5 351 aa14.44□□□□□ -0.1
LAMP1-201ENST00000332556 SLC50A1Q9BRV3 221 aa14.44□□□□□ -0.1
LAMP1-201ENST00000332556 SONP18583 2426 aaKnown RBP14.43□□□□□ -0.1
LAMP1-201ENST00000332556 H3BMG7 143 aa14.43□□□□□ -0.1
LAMP1-201ENST00000332556 MYOZ3Q8TDC0 251 aa14.43□□□□□ -0.1
LAMP1-201ENST00000332556 ATP5LO75964 103 aa14.42□□□□□ -0.1
LAMP1-201ENST00000332556 SH2D6Q7Z4S9 175 aa14.42□□□□□ -0.1
LAMP1-201ENST00000332556 IGLL5B9A064 214 aa14.42□□□□□ -0.1
LAMP1-201ENST00000332556 IGHV4-59P01825 116 aa14.42□□□□□ -0.1
LAMP1-201ENST00000332556 NRACQ8N912 160 aa14.42□□□□□ -0.1
LAMP1-201ENST00000332556 TM2D2Q9BX73 214 aa14.42□□□□□ -0.1
LAMP1-201ENST00000332556 NAV2Q8IVL1 2488 aa14.42□□□□□ -0.1
LAMP1-201ENST00000332556 LAGE3Q14657 143 aa14.41□□□□□ -0.1
LAMP1-201ENST00000332556 U3KQE9 123 aa14.41□□□□□ -0.1
LAMP1-201ENST00000332556 MYO9AB2RTY4 2548 aa14.41□□□□□ -0.1
LAMP1-201ENST00000332556 IGHV7-4-1A0A0J9YVY3 117 aa14.41□□□□□ -0.1
LAMP1-201ENST00000332556 M0R381 172 aa14.41□□□□□ -0.1
LAMP1-201ENST00000332556 ZNF479Q96JC4 524 aa14.41□□□□□ -0.1
LAMP1-201ENST00000332556 SMAGPQ0VAQ4 97 aa14.4□□□□□ -0.1
LAMP1-201ENST00000332556 SAMD13Q5VXD3 122 aa14.4□□□□□ -0.1
LAMP1-201ENST00000332556 HIST1H4GQ99525 98 aa14.4□□□□□ -0.1
LAMP1-201ENST00000332556 SRSF2Q01130 221 aaKnown RBP14.4□□□□□ -0.1
LAMP1-201ENST00000332556 SPANXN1Q5VSR9 72 aa14.4□□□□□ -0.1
LAMP1-201ENST00000332556 DUX5Q96PT3 197 aa14.4□□□□□ -0.1
LAMP1-201ENST00000332556 TSSC4Q9Y5U2 329 aaPredicted RBP14.4□□□□□ -0.1
LAMP1-201ENST00000332556 A6NDX4 124 aa14.39□□□□□ -0.11
LAMP1-201ENST00000332556 E9PLD3 99 aa14.39□□□□□ -0.11
LAMP1-201ENST00000332556 AZU1P20160 251 aa14.39□□□□□ -0.11
LAMP1-201ENST00000332556 C12orf74Q32Q52 190 aa14.39□□□□□ -0.11
LAMP1-201ENST00000332556 RAB9AP51151 201 aa14.39□□□□□ -0.11
LAMP1-201ENST00000332556 ETDBQ3ZM63 59 aa14.39□□□□□ -0.11
LAMP1-201ENST00000332556 SMPXQ9UHP9 88 aa14.39□□□□□ -0.11
LAMP1-201ENST00000332556 NF1P21359 2839 aa14.39□□□□□ -0.11
LAMP1-201ENST00000332556 SETD2Q9BYW2 2564 aaPredicted RBP14.39□□□□□ -0.11
LAMP1-201ENST00000332556 FAM223BA6NKX1 122 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 IGKV3-20P01619 116 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 RNASE4P34096 147 aaKnown RBP14.38□□□□□ -0.11
LAMP1-201ENST00000332556 FAM223AQ8IWN6 122 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 GNRH2O43555 120 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 IGHG2P01859 326 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 DEFB112Q30KQ8 113 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 RHPN1-AS1Q9BWJ2 59 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 A0A087WX48 190 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 FOXI2Q6ZQN5 318 aa14.38□□□□□ -0.11
LAMP1-201ENST00000332556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.37□□□□□ -0.11
LAMP1-201ENST00000332556 BBC3Q96PG8 261 aaPredicted RBP14.37□□□□□ -0.11
LAMP1-201ENST00000332556 SPANXB1Q9NS25 103 aaPredicted RBP14.37□□□□□ -0.11
LAMP1-201ENST00000332556 RBAKDNA6NC62 111 aa14.36□□□□□ -0.11
LAMP1-201ENST00000332556 KLK9Q2XQG4 91 aa14.36□□□□□ -0.11
LAMP1-201ENST00000332556 KLK9Q9UKQ9 250 aa14.36□□□□□ -0.11
LAMP1-201ENST00000332556 C9orf47Q6ZRZ4 202 aa14.36□□□□□ -0.11
LAMP1-201ENST00000332556 CCDC168Q8NDH2 2452 aa14.35□□□□□ -0.11
LAMP1-201ENST00000332556 INSL3P51460 131 aa14.35□□□□□ -0.11
LAMP1-201ENST00000332556 KRTAP10-9P60411 292 aa14.35□□□□□ -0.11
LAMP1-201ENST00000332556 CYSLTR1Q9Y271 337 aa14.35□□□□□ -0.11
LAMP1-201ENST00000332556 TGFAP01135 160 aa14.35□□□□□ -0.11
LAMP1-201ENST00000332556 SFTA2Q6UW10 78 aa14.35□□□□□ -0.11
LAMP1-201ENST00000332556 ZFAND2AQ8N6M9 145 aa14.35□□□□□ -0.11
LAMP1-201ENST00000332556 SRSF1Q07955 248 aaKnown RBP eCLIP14.34□□□□□ -0.11
LAMP1-201ENST00000332556 ANXA2RQ3ZCQ2 193 aa14.34□□□□□ -0.11
LAMP1-201ENST00000332556 NDUFA4O00483 81 aa14.34□□□□□ -0.11
LAMP1-201ENST00000332556 PSMG4Q5JS54 123 aa14.34□□□□□ -0.11
LAMP1-201ENST00000332556 C14orf178Q8N769 122 aaPredicted RBP14.34□□□□□ -0.11
LAMP1-201ENST00000332556 S100A4P26447 101 aaKnown RBP14.33□□□□□ -0.12
LAMP1-201ENST00000332556 RPL39LQ96EH5 51 aaKnown RBP14.33□□□□□ -0.12
LAMP1-201ENST00000332556 SOCS3O14543 225 aa14.33□□□□□ -0.12
LAMP1-201ENST00000332556 OR10J6PQ8NGY7 276 aa14.33□□□□□ -0.12
LAMP1-201ENST00000332556 SIGMAR1Q99720 223 aa14.33□□□□□ -0.12
LAMP1-201ENST00000332556 SPAG8Q99932 426 aaPredicted RBP14.33□□□□□ -0.12
LAMP1-201ENST00000332556 GAGE12HA6NDE8 117 aa14.32□□□□□ -0.12
LAMP1-201ENST00000332556 C9orf139Q6ZV77 190 aa14.32□□□□□ -0.12
LAMP1-201ENST00000332556 B4DSR2 109 aa14.32□□□□□ -0.12
LAMP1-201ENST00000332556 RNF223E7ERA6 249 aa14.32□□□□□ -0.12
LAMP1-201ENST00000332556 F8W1H4 67 aa14.32□□□□□ -0.12
LAMP1-201ENST00000332556 SCGB3A1Q96QR1 104 aa14.32□□□□□ -0.12
LAMP1-201ENST00000332556 SMIM2Q9BVW6 85 aa14.32□□□□□ -0.12
LAMP1-201ENST00000332556 TRBV7-3A0A075B6L6 115 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 OR11H12B2RN74 326 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 MGPP08493 103 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 PLNP26678 52 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 OR11H1Q8NG94 326 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 OR11H2Q8NH07 326 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 JPT2Q9H910 190 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 CHTOPQ9Y3Y2 248 aaKnown RBP14.31□□□□□ -0.12
LAMP1-201ENST00000332556 NIPBLQ6KC79 2804 aaeCLIP14.31□□□□□ -0.12
LAMP1-201ENST00000332556 MUC4Q99102 2169 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 F8VRH5 84 aa14.31□□□□□ -0.12
LAMP1-201ENST00000332556 H7C1H1 209 aa14.3□□□□□ -0.12
LAMP1-201ENST00000332556 RRN3P1Q2M238 152 aa14.3□□□□□ -0.12
LAMP1-201ENST00000332556 NDUFS8O00217 210 aa14.3□□□□□ -0.12
LAMP1-201ENST00000332556 HLA-DRB4P13762 266 aa14.3□□□□□ -0.12
LAMP1-201ENST00000332556 CRIP2P52943 208 aaPredicted RBP14.3□□□□□ -0.12
LAMP1-201ENST00000332556 CD300EQ496F6 205 aaPredicted RBP14.3□□□□□ -0.12
LAMP1-201ENST00000332556 GAGE13Q4V321 117 aa14.3□□□□□ -0.12
LAMP1-201ENST00000332556 HLA-DRB4X5D2U9 266 aa14.3□□□□□ -0.12
LAMP1-201ENST00000332556 APCP25054 2843 aa14.29□□□□□ -0.12
LAMP1-201ENST00000332556 TRAV12-2A0A075B6T6 113 aa14.29□□□□□ -0.12
LAMP1-201ENST00000332556 MYMXA0A1B0GTQ4 84 aa14.29□□□□□ -0.12
LAMP1-201ENST00000332556 ZNF688P0C7X2 276 aa14.29□□□□□ -0.12
LAMP1-201ENST00000332556 UBR5O95071 2799 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms