RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 C20orf78Q9BR46 151 aa10.16□□□□□ -0.78
SRPRA-201ENST00000332118 SMKR1H3BMG3 65 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 HNRNPA3P51991 378 aaKnown RBP10.15□□□□□ -0.78
SRPRA-201ENST00000332118 LINC00315P59091 139 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 LINC00467Q9BRT7 94 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 TENM4Q6N022 2769 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 RNASE4P34096 147 aaKnown RBP10.15□□□□□ -0.78
SRPRA-201ENST00000332118 DEFB1P60022 68 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 RPL11P62913 178 aaKnown RBP10.15□□□□□ -0.78
SRPRA-201ENST00000332118 DPH3P1Q9H4G8 78 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 ZMAT4Q9H898 229 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 PEMTQ9UBM1 199 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 NOTCH3Q9UM47 2321 aa10.15□□□□□ -0.78
SRPRA-201ENST00000332118 NCR2O95944 276 aa10.15□□□□□ -0.79
SRPRA-201ENST00000332118 SPANXN1Q5VSR9 72 aa10.15□□□□□ -0.79
SRPRA-201ENST00000332118 SORL1Q92673 2214 aa10.15□□□□□ -0.79
SRPRA-201ENST00000332118 RNASE1P07998 156 aaKnown RBP10.14□□□□□ -0.79
SRPRA-201ENST00000332118 OR9G4Q8NGQ1 327 aa10.14□□□□□ -0.79
SRPRA-201ENST00000332118 PSMG4Q5JS54 123 aa10.14□□□□□ -0.79
SRPRA-201ENST00000332118 PTH2Q96A98 100 aa10.14□□□□□ -0.79
SRPRA-201ENST00000332118 EDA2RQ9HAV5 297 aa10.13□□□□□ -0.79
SRPRA-201ENST00000332118 ESM1Q9NQ30 184 aa10.13□□□□□ -0.79
SRPRA-201ENST00000332118 PPP1R17O96001 155 aa10.13□□□□□ -0.79
SRPRA-201ENST00000332118 IGHV3-16A0A0C4DH30 117 aa10.13□□□□□ -0.79
SRPRA-201ENST00000332118 TSPOP30536 169 aa10.13□□□□□ -0.79
SRPRA-201ENST00000332118 CDKN1BP46527 198 aa10.13□□□□□ -0.79
SRPRA-201ENST00000332118 C18orf65Q6ZTR6 163 aa10.13□□□□□ -0.79
SRPRA-201ENST00000332118 TRAV25A0A0B4J276 109 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 PIK3CD-AS1Q5SR53 167 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 OR1N2Q8NGR9 330 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 CBY1Q9Y3M2 126 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 LOC389332A0A1B0GUA5 103 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 HLA-DRB4P13762 266 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 SRD5A1P18405 259 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 RASL10AQ92737 203 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 AP1S3Q96PC3 154 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 HLA-DRB4X5D2U9 266 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 POLQO75417 2590 aa10.12□□□□□ -0.79
SRPRA-201ENST00000332118 SLURP1P55000 103 aa10.11□□□□□ -0.79
SRPRA-201ENST00000332118 WFDC3Q8IUB2 231 aa10.11□□□□□ -0.79
SRPRA-201ENST00000332118 ZNF256Q9Y2P7 627 aaPredicted RBP10.11□□□□□ -0.79
SRPRA-201ENST00000332118 MXRA5Q9NR99 2828 aa10.11□□□□□ -0.79
SRPRA-201ENST00000332118 GNRH2O43555 120 aa10.11□□□□□ -0.79
SRPRA-201ENST00000332118 SCGB2A2Q13296 93 aa10.11□□□□□ -0.79
SRPRA-201ENST00000332118 IFI27L1Q96BM0 104 aa10.11□□□□□ -0.79
SRPRA-201ENST00000332118 SPAG8Q99932 426 aaPredicted RBP10.11□□□□□ -0.79
SRPRA-201ENST00000332118 USP9YO00507 2555 aaPredicted RBP10.11□□□□□ -0.79
SRPRA-201ENST00000332118 ZNF688P0C7X2 276 aa10.1□□□□□ -0.79
SRPRA-201ENST00000332118 FAM159AQ6UWV7 190 aa10.1□□□□□ -0.79
SRPRA-201ENST00000332118 OR11H1Q8NG94 326 aa10.1□□□□□ -0.79
SRPRA-201ENST00000332118 SMIM2Q9BVW6 85 aa10.1□□□□□ -0.79
SRPRA-201ENST00000332118 PHLDA3Q9Y5J5 127 aa10.1□□□□□ -0.79
SRPRA-201ENST00000332118 GATA1P15976 413 aaPredicted RBP10.1□□□□□ -0.79
SRPRA-201ENST00000332118 LAGE3Q14657 143 aa10.1□□□□□ -0.79
SRPRA-201ENST00000332118 CCL25O15444 150 aa10.09□□□□□ -0.79
SRPRA-201ENST00000332118 NDUFA7O95182 113 aa10.09□□□□□ -0.79
SRPRA-201ENST00000332118 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
SRPRA-201ENST00000332118 DEFB114Q30KQ6 69 aa10.09□□□□□ -0.79
SRPRA-201ENST00000332118 COL5A1-AS1Q5SY13 56 aa10.09□□□□□ -0.79
SRPRA-201ENST00000332118 NAA38Q9BRA0 125 aaKnown RBP10.09□□□□□ -0.79
SRPRA-201ENST00000332118 SETD2Q9BYW2 2564 aaPredicted RBP10.09□□□□□ -0.79
SRPRA-201ENST00000332118 ZANQ9Y493 2812 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 CBY3A6NI87 242 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 DLX4Q92988 240 aaPredicted RBP10.08□□□□□ -0.8
SRPRA-201ENST00000332118 S100A4P26447 101 aaKnown RBP10.08□□□□□ -0.8
SRPRA-201ENST00000332118 SUMO2P61956 95 aaKnown RBP10.08□□□□□ -0.8
SRPRA-201ENST00000332118 MPV17L2Q567V2 206 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 ZFYVE26Q68DK2 2539 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 IGKV3-7A0A075B6H7 116 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 H3BMM0 161 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 COX8AP10176 69 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 PTTG1IPP53801 180 aa10.08□□□□□ -0.8
SRPRA-201ENST00000332118 LINC01549A6NIU2 74 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 ATP5LO75964 103 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 FGF6P10767 208 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 ORMDL2Q53FV1 153 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 TOMM6Q96B49 74 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 RAX2Q96IS3 184 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 LRRK2Q5S007 2527 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 ODF1Q14990 250 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 HIST2H2BCQ6DN03 193 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 RNASE8Q8TDE3 154 aaKnown RBP10.07□□□□□ -0.8
SRPRA-201ENST00000332118 MUC4Q99102 2169 aa10.07□□□□□ -0.8
SRPRA-201ENST00000332118 HILS1P60008 231 aa10.06□□□□□ -0.8
SRPRA-201ENST00000332118 RNF151Q2KHN1 245 aa10.06□□□□□ -0.8
SRPRA-201ENST00000332118 DEFB136Q30KP8 78 aa10.06□□□□□ -0.8
SRPRA-201ENST00000332118 TRAV12-3A0A0B4J271 114 aa10.06□□□□□ -0.8
SRPRA-201ENST00000332118 HSBP1L1C9JCN9 74 aa10.06□□□□□ -0.8
SRPRA-201ENST00000332118 KLHL30-AS1Q8NEE0 82 aa10.06□□□□□ -0.8
SRPRA-201ENST00000332118 TMEM158Q8WZ71 300 aa10.06□□□□□ -0.8
SRPRA-201ENST00000332118 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
SRPRA-201ENST00000332118 RBMY1BA6NDE4 496 aaKnown RBP10.05□□□□□ -0.8
SRPRA-201ENST00000332118 RBMY1EA6NEQ0 496 aaKnown RBP10.05□□□□□ -0.8
SRPRA-201ENST00000332118 RBMY1DP0C7P1 496 aaKnown RBP10.05□□□□□ -0.8
SRPRA-201ENST00000332118 POLR2KP53803 58 aaKnown RBP10.05□□□□□ -0.8
SRPRA-201ENST00000332118 ANKRD39Q53RE8 183 aa10.05□□□□□ -0.8
SRPRA-201ENST00000332118 TMEM61Q8N0U2 210 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms