RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 IGKV3-20P01619 116 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 HLA-DRB4P13762 266 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 KIR3DS1Q14943 382 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 IQCJQ1A5X6 159 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 ANXA2RQ3ZCQ2 193 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 HLA-DRB4X5D2U9 266 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 DNAH3Q8TD57 4116 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 MUC21A0A0G2JKD1 596 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 MUC21A0A140T8X8 626 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 C7orf71A4D174 169 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 A8MTW9 85 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 H3BMM0 161 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 MUC21Q5SSG8 566 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 NAGKQ9UJ70 344 aa13.8□□□□□ -0.2
EXOSC3-201ENST00000327304 NBEAL1Q6ZS30 2694 aa13.79□□□□□ -0.2
EXOSC3-201ENST00000327304 ASIPP42127 132 aa13.79□□□□□ -0.2
EXOSC3-201ENST00000327304 CDKN1BP46527 198 aa13.79□□□□□ -0.2
EXOSC3-201ENST00000327304 Q8N1Y9 231 aa13.79□□□□□ -0.2
EXOSC3-201ENST00000327304 DEFB125Q8N687 156 aa13.79□□□□□ -0.2
EXOSC3-201ENST00000327304 SAMD10Q9BYL1 202 aa13.79□□□□□ -0.2
EXOSC3-201ENST00000327304 U3KQK5 164 aa13.79□□□□□ -0.2
EXOSC3-201ENST00000327304 RBMY1BA6NDE4 496 aaKnown RBP13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 RBMY1EA6NEQ0 496 aaKnown RBP13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 RBMY1DP0C7P1 496 aaKnown RBP13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 SSTP61278 116 aa13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 JOSD1Q15040 202 aaPredicted RBP13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 AMN1Q8IY45 258 aa13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 ZNF324O75467 553 aaPredicted RBP13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 AMTNQ6UX39 209 aa13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 MSRB1Q9NZV6 116 aa13.78□□□□□ -0.2
EXOSC3-201ENST00000327304 H3BVH4 76 aa13.77□□□□□ -0.21
EXOSC3-201ENST00000327304 FAM159AQ6UWV7 190 aa13.77□□□□□ -0.21
EXOSC3-201ENST00000327304 OR10AG1Q8NH19 301 aa13.77□□□□□ -0.21
EXOSC3-201ENST00000327304 S100A4P26447 101 aaKnown RBP13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 TDRG1Q3Y452 100 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 MRPL51Q4U2R6 128 aaKnown RBP13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 NIT1Q86X76 327 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 STHQ8IWL8 128 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 ORMDL3Q8N138 153 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 CHCHD1Q96BP2 118 aaKnown RBP13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 SCRT2Q9NQ03 307 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 NIT2Q9NQR4 276 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 AMTP48728 403 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 SPANXN1Q5VSR9 72 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 TRPT1Q86TN4 253 aaKnown RBP13.76□□□□□ -0.21
EXOSC3-201ENST00000327304 TRAV12-3A0A0B4J271 114 aa13.75□□□□□ -0.21
EXOSC3-201ENST00000327304 HSBP1O75506 76 aa13.75□□□□□ -0.21
EXOSC3-201ENST00000327304 PPBPP02775 128 aa13.75□□□□□ -0.21
EXOSC3-201ENST00000327304 D6R8Y8 96 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 M0R2Z0 102 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 RAB4AP20338 218 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 SPINK13Q1W4C9 94 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 RNF185Q96GF1 192 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 URB1-AS1Q96HZ7 61 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 ZMAT5Q9UDW3 170 aaKnown RBP13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 GNRH2O43555 120 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 LINC00614P0C842 121 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 FXYD7P58549 80 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 RNASEKQ6P5S7 137 aaKnown RBP13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 CLUHP3Q96NS8 147 aa13.74□□□□□ -0.21
EXOSC3-201ENST00000327304 RNASE3P12724 160 aaKnown RBP13.73□□□□□ -0.21
EXOSC3-201ENST00000327304 RPL35AP18077 110 aaKnown RBP13.73□□□□□ -0.21
EXOSC3-201ENST00000327304 PMCHP20382 165 aa13.73□□□□□ -0.21
EXOSC3-201ENST00000327304 PRELID3AQ96N28 172 aa13.73□□□□□ -0.21
EXOSC3-201ENST00000327304 CKS2P33552 79 aa13.72□□□□□ -0.21
EXOSC3-201ENST00000327304 Q6ZWC4 215 aa13.72□□□□□ -0.21
EXOSC3-201ENST00000327304 LAMTOR2Q9Y2Q5 125 aa13.72□□□□□ -0.21
EXOSC3-201ENST00000327304 PHLDA3Q9Y5J5 127 aa13.72□□□□□ -0.21
EXOSC3-201ENST00000327304 TRAV12-2A0A075B6T6 113 aa13.71□□□□□ -0.21
EXOSC3-201ENST00000327304 KPRPQ5T749 579 aaPredicted RBP13.71□□□□□ -0.22
EXOSC3-201ENST00000327304 NXPH4O95158 308 aa13.7□□□□□ -0.22
EXOSC3-201ENST00000327304 EVI2AP22794 236 aa13.7□□□□□ -0.22
EXOSC3-201ENST00000327304 FAM19A2Q8N3H0 131 aa13.7□□□□□ -0.22
EXOSC3-201ENST00000327304 TIMM8BQ9Y5J9 83 aaPredicted RBP13.7□□□□□ -0.22
EXOSC3-201ENST00000327304 IGHV1OR15-1A0A075B7D0 117 aa13.69□□□□□ -0.22
EXOSC3-201ENST00000327304 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
EXOSC3-201ENST00000327304 PRSS3P2Q8NHM4 247 aa13.69□□□□□ -0.22
EXOSC3-201ENST00000327304 M0R381 172 aa13.68□□□□□ -0.22
EXOSC3-201ENST00000327304 CRXO43186 299 aaPredicted RBP13.68□□□□□ -0.22
EXOSC3-201ENST00000327304 IGHV4-30-4P0DP06 118 aa13.68□□□□□ -0.22
EXOSC3-201ENST00000327304 IGHV3-16A0A0C4DH30 117 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 GIG44P09565 113 aaPredicted RBP13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 CDPF1Q6NVV7 123 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 C9orf85Q96MD7 179 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 AP5S1Q9NUS5 200 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 NPYP01303 97 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 FA2HQ7L5A8 372 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 C20orf144Q9BQM9 153 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 XCL2Q9UBD3 114 aa13.67□□□□□ -0.22
EXOSC3-201ENST00000327304 TRGV11A0A075B6L2 103 aa13.66□□□□□ -0.22
EXOSC3-201ENST00000327304 IGHV1-24A0A0C4DH33 117 aa13.66□□□□□ -0.22
EXOSC3-201ENST00000327304 SMKR1H3BMG3 65 aa13.66□□□□□ -0.22
EXOSC3-201ENST00000327304 S100A12P80511 92 aa13.66□□□□□ -0.22
EXOSC3-201ENST00000327304 MRAP2Q96G30 205 aa13.66□□□□□ -0.22
EXOSC3-201ENST00000327304 AP1S3Q96PC3 154 aa13.66□□□□□ -0.22
EXOSC3-201ENST00000327304 NCR2O95944 276 aa13.65□□□□□ -0.22
EXOSC3-201ENST00000327304 SCGB1D1O95968 90 aa13.65□□□□□ -0.22
EXOSC3-201ENST00000327304 RBMY1A1P0DJD3 496 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms