RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 KHDC3LQ587J8 217 aa12.65□□□□□ -0.38
SSNA1-201ENST00000322310 NIT1Q86X76 327 aa12.65□□□□□ -0.38
SSNA1-201ENST00000322310 PARLQ9H300 379 aa12.65□□□□□ -0.38
SSNA1-201ENST00000322310 TNXBP22105 4242 aa12.65□□□□□ -0.38
SSNA1-201ENST00000322310 RNASE3P12724 160 aaKnown RBP12.64□□□□□ -0.39
SSNA1-201ENST00000322310 IL7P13232 177 aa12.64□□□□□ -0.39
SSNA1-201ENST00000322310 MBD2Q9UBB5 411 aa12.64□□□□□ -0.39
SSNA1-201ENST00000322310 CCDC160A6NGH7 325 aa12.63□□□□□ -0.39
SSNA1-201ENST00000322310 FFAR4Q5NUL3 377 aa12.63□□□□□ -0.39
SSNA1-201ENST00000322310 FAM74A1Q5RGS3 127 aa12.63□□□□□ -0.39
SSNA1-201ENST00000322310 C14orf178Q8N769 122 aaPredicted RBP12.63□□□□□ -0.39
SSNA1-201ENST00000322310 PTH2Q96A98 100 aa12.63□□□□□ -0.39
SSNA1-201ENST00000322310 NUDT15Q9NV35 164 aa12.63□□□□□ -0.39
SSNA1-201ENST00000322310 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
SSNA1-201ENST00000322310 PLA2G10O15496 165 aa12.62□□□□□ -0.39
SSNA1-201ENST00000322310 TCRBP04435 133 aa12.62□□□□□ -0.39
SSNA1-201ENST00000322310 SEC11BP0C7V7 166 aa12.61□□□□□ -0.39
SSNA1-201ENST00000322310 TAS2R45P59539 299 aa12.61□□□□□ -0.39
SSNA1-201ENST00000322310 ATRAIDQ6UW56 229 aa12.61□□□□□ -0.39
SSNA1-201ENST00000322310 ZFP2Q6ZN57 461 aa12.61□□□□□ -0.39
SSNA1-201ENST00000322310 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
SSNA1-201ENST00000322310 JPT2Q9H910 190 aa12.61□□□□□ -0.39
SSNA1-201ENST00000322310 OR5AC2Q9NZP5 309 aa12.61□□□□□ -0.39
SSNA1-201ENST00000322310 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.61□□□□□ -0.39
SSNA1-201ENST00000322310 PANO1I0J062 215 aa12.6□□□□□ -0.39
SSNA1-201ENST00000322310 TAAR5O14804 337 aa12.6□□□□□ -0.39
SSNA1-201ENST00000322310 LYRM1O43325 122 aa12.6□□□□□ -0.39
SSNA1-201ENST00000322310 GCGP01275 180 aa12.6□□□□□ -0.39
SSNA1-201ENST00000322310 ASIPP42127 132 aa12.6□□□□□ -0.39
SSNA1-201ENST00000322310 C14orf177Q52M58 125 aa12.6□□□□□ -0.39
SSNA1-201ENST00000322310 Q6ZRU5 148 aa12.6□□□□□ -0.39
SSNA1-201ENST00000322310 NDFIP1Q9BT67 221 aa12.6□□□□□ -0.39
SSNA1-201ENST00000322310 A0A087WX48 190 aa12.59□□□□□ -0.39
SSNA1-201ENST00000322310 LGALSLQ3ZCW2 172 aaPredicted RBP12.59□□□□□ -0.39
SSNA1-201ENST00000322310 A8MWV9 139 aa12.58□□□□□ -0.4
SSNA1-201ENST00000322310 FGF8P55075 233 aaPredicted RBP12.58□□□□□ -0.4
SSNA1-201ENST00000322310 UFSP1Q6NVU6 142 aa12.58□□□□□ -0.4
SSNA1-201ENST00000322310 ARL6IP6Q8N6S5 226 aa12.58□□□□□ -0.4
SSNA1-201ENST00000322310 LRRC37A5PQ49AS3 106 aa12.57□□□□□ -0.4
SSNA1-201ENST00000322310 C1orf43Q9BWL3 253 aa12.57□□□□□ -0.4
SSNA1-201ENST00000322310 USP17L23D6RBM5 183 aa12.56□□□□□ -0.4
SSNA1-201ENST00000322310 H0YIZ8 118 aa12.56□□□□□ -0.4
SSNA1-201ENST00000322310 SIX6O95475 246 aa12.56□□□□□ -0.4
SSNA1-201ENST00000322310 ELOBQ15370 118 aa12.56□□□□□ -0.4
SSNA1-201ENST00000322310 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
SSNA1-201ENST00000322310 OR10G9Q8NGN4 311 aa12.56□□□□□ -0.4
SSNA1-201ENST00000322310 PRSS1P07477 247 aa12.55□□□□□ -0.4
SSNA1-201ENST00000322310 H2AFB2P0C5Z0 115 aa12.55□□□□□ -0.4
SSNA1-201ENST00000322310 Q0VG73 95 aa12.55□□□□□ -0.4
SSNA1-201ENST00000322310 ENHOQ6UWT2 76 aa12.55□□□□□ -0.4
SSNA1-201ENST00000322310 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
SSNA1-201ENST00000322310 HMGB3O15347 200 aaKnown RBP12.54□□□□□ -0.4
SSNA1-201ENST00000322310 HLA-DQA1P01909 254 aa12.54□□□□□ -0.4
SSNA1-201ENST00000322310 KCNIP4Q6PIL6 250 aa12.54□□□□□ -0.4
SSNA1-201ENST00000322310 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
SSNA1-201ENST00000322310 PSG8Q9UQ74 426 aa12.54□□□□□ -0.4
SSNA1-201ENST00000322310 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
SSNA1-201ENST00000322310 TCRAP04437 139 aa12.53□□□□□ -0.4
SSNA1-201ENST00000322310 S100A4P26447 101 aaKnown RBP12.53□□□□□ -0.4
SSNA1-201ENST00000322310 ODF1Q14990 250 aa12.53□□□□□ -0.4
SSNA1-201ENST00000322310 SMUG1Q53HV7 270 aa12.53□□□□□ -0.4
SSNA1-201ENST00000322310 PQLC2Q6ZP29 291 aa12.53□□□□□ -0.4
SSNA1-201ENST00000322310 C9orf163Q8N9P6 203 aa12.53□□□□□ -0.4
SSNA1-201ENST00000322310 RBM38Q9H0Z9 239 aaKnown RBP12.53□□□□□ -0.4
SSNA1-201ENST00000322310 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
SSNA1-201ENST00000322310 PIK3CD-AS1Q5SR53 167 aa12.52□□□□□ -0.41
SSNA1-201ENST00000322310 FAM74A4Q5TZK3 123 aa12.52□□□□□ -0.41
SSNA1-201ENST00000322310 PRNTQ86SH4 94 aa12.52□□□□□ -0.41
SSNA1-201ENST00000322310 OR10G7Q8NGN6 311 aa12.52□□□□□ -0.41
SSNA1-201ENST00000322310 A0A0D9SG52 128 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 TMEM262E9PQX1 116 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 CRPP02741 224 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 RAB2AP61019 212 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 DGAT2L7PQ6IED9 249 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 C15orf54Q8N8G6 183 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 ZC2HC1AQ96GY0 325 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 SMIM3Q9BZL3 60 aa12.51□□□□□ -0.41
SSNA1-201ENST00000322310 A0A1W2PPV4 95 aa12.5□□□□□ -0.41
SSNA1-201ENST00000322310 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
SSNA1-201ENST00000322310 SDIM1Q6ZPB5 146 aa12.5□□□□□ -0.41
SSNA1-201ENST00000322310 C5orf17Q8NAS9 161 aa12.5□□□□□ -0.41
SSNA1-201ENST00000322310 A0A087WWL8 130 aa12.49□□□□□ -0.41
SSNA1-201ENST00000322310 H3BVH4 76 aa12.49□□□□□ -0.41
SSNA1-201ENST00000322310 RHODO00212 210 aa12.49□□□□□ -0.41
SSNA1-201ENST00000322310 ARL14EPLP0DKL9 152 aa12.49□□□□□ -0.41
SSNA1-201ENST00000322310 HSPB11Q9Y547 144 aa12.49□□□□□ -0.41
SSNA1-201ENST00000322310 K7EQM0 130 aa12.48□□□□□ -0.41
SSNA1-201ENST00000322310 MPV17L2Q567V2 206 aa12.48□□□□□ -0.41
SSNA1-201ENST00000322310 IL36BQ9NZH7 164 aa12.48□□□□□ -0.41
SSNA1-201ENST00000322310 ANGP03950 147 aaKnown RBP12.47□□□□□ -0.41
SSNA1-201ENST00000322310 UBE2D3P61077 147 aa12.46□□□□□ -0.41
SSNA1-201ENST00000322310 UBE2D2P62837 147 aa12.46□□□□□ -0.41
SSNA1-201ENST00000322310 FAM240BA0A1B0GVZ2 78 aa12.45□□□□□ -0.42
SSNA1-201ENST00000322310 SUMO1P63165 101 aaKnown RBP12.45□□□□□ -0.42
SSNA1-201ENST00000322310 RPL19P84098 196 aaKnown RBP12.45□□□□□ -0.42
SSNA1-201ENST00000322310 DPH3P1Q9H4G8 78 aa12.45□□□□□ -0.42
SSNA1-201ENST00000322310 WFDC1Q9HC57 220 aa12.45□□□□□ -0.42
SSNA1-201ENST00000322310 EPDR1Q9UM22 224 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms