RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 M0R1W7 72 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 EMP1P54849 157 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 COX6B1P14854 86 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 UBE2D3P61077 147 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 UBE2D2P62837 147 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 TEN1Q86WV5 123 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 CARD19Q96LW7 228 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 DPH3P1Q9H4G8 78 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 PHLDA3Q9Y5J5 127 aa13.62□□□□□ -0.23
PRKCB-202ENST00000321728 CD7P09564 240 aa13.61□□□□□ -0.23
PRKCB-202ENST00000321728 SPTAN1Q13813 2472 aaKnown RBP13.61□□□□□ -0.23
PRKCB-202ENST00000321728 FAM110DQ8TAY7 271 aaPredicted RBP13.61□□□□□ -0.23
PRKCB-202ENST00000321728 TCL1BO95988 128 aa13.61□□□□□ -0.23
PRKCB-202ENST00000321728 NDUFA11Q86Y39 141 aa13.61□□□□□ -0.23
PRKCB-202ENST00000321728 TIMD4Q96H15 378 aa13.61□□□□□ -0.23
PRKCB-202ENST00000321728 Q8N9W7 124 aa13.6□□□□□ -0.23
PRKCB-202ENST00000321728 DEFB104AQ8WTQ1 72 aa13.6□□□□□ -0.23
PRKCB-202ENST00000321728 MRPL53Q96EL3 112 aaKnown RBP13.6□□□□□ -0.23
PRKCB-202ENST00000321728 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
PRKCB-202ENST00000321728 IGF2-ASQ6U949 168 aa13.6□□□□□ -0.23
PRKCB-202ENST00000321728 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
PRKCB-202ENST00000321728 CDSNQ15517 529 aa13.59□□□□□ -0.23
PRKCB-202ENST00000321728 A8MWV9 139 aa13.59□□□□□ -0.23
PRKCB-202ENST00000321728 DUSP14O95147 198 aaKnown RBP13.59□□□□□ -0.23
PRKCB-202ENST00000321728 SCGB1C2P0DMR2 95 aa13.59□□□□□ -0.23
PRKCB-202ENST00000321728 C11orf86A6NJI1 115 aa13.58□□□□□ -0.23
PRKCB-202ENST00000321728 VPS13CQ709C8 3753 aa13.58□□□□□ -0.24
PRKCB-202ENST00000321728 G3V318 75 aa13.58□□□□□ -0.24
PRKCB-202ENST00000321728 ASIPP42127 132 aa13.58□□□□□ -0.24
PRKCB-202ENST00000321728 HERVK_113P61574 105 aa13.58□□□□□ -0.24
PRKCB-202ENST00000321728 A0A0J9YY99 117 aa13.57□□□□□ -0.24
PRKCB-202ENST00000321728 EBI3Q14213 229 aa13.57□□□□□ -0.24
PRKCB-202ENST00000321728 RNF223E7ERA6 249 aa13.57□□□□□ -0.24
PRKCB-202ENST00000321728 TRBV20-1A0A075B6N2 111 aa13.57□□□□□ -0.24
PRKCB-202ENST00000321728 CRYGDP07320 174 aa13.57□□□□□ -0.24
PRKCB-202ENST00000321728 EEF1AKMT3Q96AZ1 226 aa13.57□□□□□ -0.24
PRKCB-202ENST00000321728 RNF183Q96D59 192 aa13.57□□□□□ -0.24
PRKCB-202ENST00000321728 KIR2DL4Q99706 377 aa13.57□□□□□ -0.24
PRKCB-202ENST00000321728 ZNF688P0C7X2 276 aa13.56□□□□□ -0.24
PRKCB-202ENST00000321728 Q6ZS46 218 aa13.56□□□□□ -0.24
PRKCB-202ENST00000321728 C20orf173Q96LM9 149 aa13.56□□□□□ -0.24
PRKCB-202ENST00000321728 TRAV21A0A0B4J279 112 aa13.56□□□□□ -0.24
PRKCB-202ENST00000321728 OOSP1A8MZH6 123 aa13.56□□□□□ -0.24
PRKCB-202ENST00000321728 CFC1BP0CG36 223 aa13.56□□□□□ -0.24
PRKCB-202ENST00000321728 CFC1P0CG37 223 aa13.56□□□□□ -0.24
PRKCB-202ENST00000321728 VCX2Q9H322 139 aa13.56□□□□□ -0.24
PRKCB-202ENST00000321728 DEFB1P60022 68 aa13.55□□□□□ -0.24
PRKCB-202ENST00000321728 ANXA2RQ3ZCQ2 193 aa13.55□□□□□ -0.24
PRKCB-202ENST00000321728 ANKRD29Q8N6D5 301 aa13.55□□□□□ -0.24
PRKCB-202ENST00000321728 TP53TG1Q9Y2A0 90 aa13.55□□□□□ -0.24
PRKCB-202ENST00000321728 IGLV4-69A0A075B6H9 119 aa13.55□□□□□ -0.24
PRKCB-202ENST00000321728 CENPVL3A0A0U1RRI6 287 aa13.55□□□□□ -0.24
PRKCB-202ENST00000321728 ARL3P36405 182 aa13.55□□□□□ -0.24
PRKCB-202ENST00000321728 ERG28Q9UKR5 140 aa13.55□□□□□ -0.24
PRKCB-202ENST00000321728 TMEM170BQ5T4T1 132 aa13.54□□□□□ -0.24
PRKCB-202ENST00000321728 MINOS1Q5TGZ0 78 aa13.54□□□□□ -0.24
PRKCB-202ENST00000321728 ZFAND2AQ8N6M9 145 aa13.54□□□□□ -0.24
PRKCB-202ENST00000321728 ANAPC13Q9BS18 74 aa13.54□□□□□ -0.24
PRKCB-202ENST00000321728 MINOS1-NBL1R4GNA1 71 aa13.54□□□□□ -0.24
PRKCB-202ENST00000321728 C10orf126Q8N4M7 172 aa13.54□□□□□ -0.24
PRKCB-202ENST00000321728 OR10J6PQ8NGY7 276 aa13.54□□□□□ -0.24
PRKCB-202ENST00000321728 GNRH2O43555 120 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 TSHBP01222 138 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 IGHV3-30P01768 117 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 IGHV3-30-5P0DP03 117 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 RNASE4P34096 147 aaKnown RBP13.53□□□□□ -0.24
PRKCB-202ENST00000321728 LENEPQ9Y5L5 61 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 PPP1R17O96001 155 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 GATA3P23771 443 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 C9orf139Q6ZV77 190 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 LINC00477Q96M19 166 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 PRO1854Q9UHT4 67 aa13.53□□□□□ -0.24
PRKCB-202ENST00000321728 TSPEAR-AS2P59090 65 aa13.52□□□□□ -0.24
PRKCB-202ENST00000321728 PMVKQ15126 192 aa13.52□□□□□ -0.24
PRKCB-202ENST00000321728 GPHB5Q86YW7 130 aa13.52□□□□□ -0.24
PRKCB-202ENST00000321728 TRBV7-1A0A0A6YYK4 115 aa13.52□□□□□ -0.25
PRKCB-202ENST00000321728 RPL39P62891 51 aaKnown RBP13.52□□□□□ -0.25
PRKCB-202ENST00000321728 FOXC1Q12948 553 aa13.52□□□□□ -0.25
PRKCB-202ENST00000321728 RAX2Q96IS3 184 aa13.52□□□□□ -0.25
PRKCB-202ENST00000321728 U3KQE9 123 aa13.52□□□□□ -0.25
PRKCB-202ENST00000321728 ZFAND6Q6FIF0 208 aa13.51□□□□□ -0.25
PRKCB-202ENST00000321728 SLC25A29Q8N8R3 303 aa13.51□□□□□ -0.25
PRKCB-202ENST00000321728 TCF15Q12870 199 aa13.51□□□□□ -0.25
PRKCB-202ENST00000321728 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
PRKCB-202ENST00000321728 ITLN2Q8WWU7 325 aaPredicted RBP13.51□□□□□ -0.25
PRKCB-202ENST00000321728 TEX29Q8N6K0 151 aa13.5□□□□□ -0.25
PRKCB-202ENST00000321728 CCL21O00585 134 aa13.5□□□□□ -0.25
PRKCB-202ENST00000321728 IGIPA6NJ69 53 aa13.49□□□□□ -0.25
PRKCB-202ENST00000321728 C9JAW5 83 aa13.49□□□□□ -0.25
PRKCB-202ENST00000321728 TMEM262E9PQX1 116 aa13.49□□□□□ -0.25
PRKCB-202ENST00000321728 H7C2G1 150 aa13.49□□□□□ -0.25
PRKCB-202ENST00000321728 SLC25A20O43772 301 aa13.49□□□□□ -0.25
PRKCB-202ENST00000321728 ZFP36P26651 326 aaKnown RBP13.49□□□□□ -0.25
PRKCB-202ENST00000321728 C1orf122Q6ZSJ8 110 aa13.49□□□□□ -0.25
PRKCB-202ENST00000321728 IGHV1-69DA0A0B4J2H0 117 aa13.49□□□□□ -0.25
PRKCB-202ENST00000321728 RPL11P62913 178 aaKnown RBP13.49□□□□□ -0.25
PRKCB-202ENST00000321728 CHD8Q9HCK8 2581 aa13.49□□□□□ -0.25
PRKCB-202ENST00000321728 LGALS3P17931 250 aaKnown RBP13.48□□□□□ -0.25
PRKCB-202ENST00000321728 NCOR2Q9Y618 2525 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms