RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 PLAC8L1A1L4L8 177 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 HIGD1CA8MV81 97 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 S100PP25815 95 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 KCNIP4Q6PIL6 250 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 LYZL1Q6UWQ5 148 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 NUP35Q8NFH5 326 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 PTH2Q96A98 100 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 GSN-AS1Q9NRJ2 163 aa9.79□□□□□ -0.84
PRPF18-201ENST00000320054 SNURFLB1AK76 121 aa9.78□□□□□ -0.84
PRPF18-201ENST00000320054 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
PRPF18-201ENST00000320054 Q8NAQ8 132 aa9.78□□□□□ -0.84
PRPF18-201ENST00000320054 PGLYRP4Q96LB8 373 aa9.78□□□□□ -0.84
PRPF18-201ENST00000320054 RETNQ9HD89 108 aa9.78□□□□□ -0.84
PRPF18-201ENST00000320054 SMCO4Q9NRQ5 59 aa9.78□□□□□ -0.84
PRPF18-201ENST00000320054 IGHV4-4A0A075B6R2 117 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 IGHV4-28A0A0C4DH34 117 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 NXPH4O95158 308 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 FAM3BP58499 235 aaPredicted RBP9.77□□□□□ -0.85
PRPF18-201ENST00000320054 CACNG7P62955 275 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 PIK3CD-AS1Q5SR53 167 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 BORCS7Q96B45 105 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 ZMAT4Q9H898 229 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 PHLDA3Q9Y5J5 127 aa9.77□□□□□ -0.85
PRPF18-201ENST00000320054 A0A1B0GUT8 65 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 M0R2P5 195 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 NHLRC4P0CG21 123 aaPredicted RBP9.76□□□□□ -0.85
PRPF18-201ENST00000320054 LGALS9BQ3B8N2 356 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 ZFP82Q8N141 532 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 OR10AG1Q8NH19 301 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 BTF3L4Q96K17 158 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 NDUFAF3Q9BU61 184 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 TIMM8BQ9Y5J9 83 aaPredicted RBP9.76□□□□□ -0.85
PRPF18-201ENST00000320054 COL7A1Q02388 2944 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 NACAE9PAV3 2078 aa9.76□□□□□ -0.85
PRPF18-201ENST00000320054 SPINK4O60575 86 aa9.75□□□□□ -0.85
PRPF18-201ENST00000320054 RIGQ13278 110 aa9.75□□□□□ -0.85
PRPF18-201ENST00000320054 SPANXN1Q5VSR9 72 aa9.75□□□□□ -0.85
PRPF18-201ENST00000320054 ATP5L2Q7Z4Y8 100 aa9.75□□□□□ -0.85
PRPF18-201ENST00000320054 CBLN2Q8IUK8 224 aa9.75□□□□□ -0.85
PRPF18-201ENST00000320054 SYT8Q8NBV8 401 aa9.75□□□□□ -0.85
PRPF18-201ENST00000320054 YPEL4Q96NS1 127 aa9.75□□□□□ -0.85
PRPF18-201ENST00000320054 C11orf68Q9H3H3 251 aaKnown RBP9.75□□□□□ -0.85
PRPF18-201ENST00000320054 A0A1B0GW15 77 aa9.74□□□□□ -0.85
PRPF18-201ENST00000320054 ELOBQ15370 118 aa9.74□□□□□ -0.85
PRPF18-201ENST00000320054 ZNF876PQ49A33 203 aa9.74□□□□□ -0.85
PRPF18-201ENST00000320054 TMEM88Q6PEY1 159 aa9.74□□□□□ -0.85
PRPF18-201ENST00000320054 RASL10AQ92737 203 aa9.74□□□□□ -0.85
PRPF18-201ENST00000320054 NOP10Q9NPE3 64 aaKnown RBP9.74□□□□□ -0.85
PRPF18-201ENST00000320054 URGCP-MRPS24S4R325 110 aa9.74□□□□□ -0.85
PRPF18-201ENST00000320054 TRBV24-1A0A075B6N3 115 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 TEX48A0A1B0GUV7 120 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 A0A1B0GXF2 115 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 LYRM9A8MSI8 78 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 M0R381 172 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 NTF3P20783 257 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 DMRTA1Q5VZB9 504 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 LINC00612Q8N6U2 182 aa9.73□□□□□ -0.85
PRPF18-201ENST00000320054 SCO1O75880 301 aa9.72□□□□□ -0.85
PRPF18-201ENST00000320054 S100A8P05109 93 aa9.72□□□□□ -0.85
PRPF18-201ENST00000320054 EMP1P54849 157 aa9.72□□□□□ -0.85
PRPF18-201ENST00000320054 TWIST1Q15672 202 aa9.72□□□□□ -0.85
PRPF18-201ENST00000320054 RASL11AQ6T310 242 aa9.72□□□□□ -0.85
PRPF18-201ENST00000320054 MRPL16Q9NX20 251 aaKnown RBP9.72□□□□□ -0.85
PRPF18-201ENST00000320054 DKK2Q9UBU2 259 aa9.72□□□□□ -0.85
PRPF18-201ENST00000320054 TRGV1A0A0A0MS02 117 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 DEFB4AO15263 64 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 TRGC1P0CF51 173 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 SPART-AS1P0CW21 52 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 HBBP68871 147 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 FAM222AQ5U5X8 452 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 MRPL54Q6P161 138 aaKnown RBP9.71□□□□□ -0.86
PRPF18-201ENST00000320054 Q6ZTI0 123 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 GATD1Q8NB37 220 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 C18orf15Q96N68 181 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 MSRB1Q9NZV6 116 aa9.71□□□□□ -0.86
PRPF18-201ENST00000320054 TGIF2-C20orf24A0A0A6YYL0 155 aa9.7□□□□□ -0.86
PRPF18-201ENST00000320054 A8MWV9 139 aa9.7□□□□□ -0.86
PRPF18-201ENST00000320054 SSTP61278 116 aa9.7□□□□□ -0.86
PRPF18-201ENST00000320054 COX19Q49B96 90 aa9.7□□□□□ -0.86
PRPF18-201ENST00000320054 AP1S3Q96PC3 154 aa9.7□□□□□ -0.86
PRPF18-201ENST00000320054 FBN3Q75N90 2809 aa9.7□□□□□ -0.86
PRPF18-201ENST00000320054 A0A0J9YWU9 116 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 GAGE12BA1L429 117 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 RS1O15537 224 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 GAGE7O76087 117 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 GAGE12FP0CL80 117 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 GAGE12GP0CL81 117 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 GAGE12IP0CL82 117 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 SMIM15Q7Z3B0 74 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 FAM210BQ96KR6 192 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 TMEM191AQ9H0A3 160 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 DNAH9Q9NYC9 4486 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
PRPF18-201ENST00000320054 COLCA2A8K830 154 aa9.68□□□□□ -0.86
PRPF18-201ENST00000320054 CIDEAO60543 219 aa9.68□□□□□ -0.86
PRPF18-201ENST00000320054 CAMPP49913 170 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms